RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 DIP2BQ9P265 1576 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 LTN1O94822 1766 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 CCDC18Q5T9S5 1454 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 SPTA1P02549 2419 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 TACC2O95359 2948 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 SRRM2Q9UQ35 2752 aaKnown RBP0.16□□□□□ -2.38
SNX27-205ENST00000482791 DMXL2Q8TDJ6 3036 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 TRAV21A0A0B4J279 112 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 ACYP1P07311 99 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.16□□□□□ -2.38
SNX27-205ENST00000482791 CEP250Q9BV73 2442 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 FREM2Q5SZK8 3169 aa0.16□□□□□ -2.38
SNX27-205ENST00000482791 CUBNO60494 3623 aa0.15□□□□□ -2.38
SNX27-205ENST00000482791 ASPMQ8IZT6 3477 aa0.15□□□□□ -2.38
SNX27-205ENST00000482791 USP32Q8NFA0 1604 aa0.15□□□□□ -2.39
SNX27-205ENST00000482791 PCNX1Q96RV3 2341 aa0.15□□□□□ -2.39
SNX27-205ENST00000482791 HECTD4Q9Y4D8 3996 aa0.14□□□□□ -2.39
SNX27-205ENST00000482791 KANTRA0A1W2PQU2 76 aa0.14□□□□□ -2.39
SNX27-205ENST00000482791 LOC730098B7Z3J9 87 aa0.14□□□□□ -2.39
SNX27-205ENST00000482791 HEPN1Q6WQI6 88 aa0.14□□□□□ -2.39
SNX27-205ENST00000482791 WFDC9Q8NEX5 89 aa0.14□□□□□ -2.39
SNX27-205ENST00000482791 CEP290O15078 2479 aa0.14□□□□□ -2.39
SNX27-205ENST00000482791 PREX1Q8TCU6 1659 aa0.14□□□□□ -2.39
SNX27-205ENST00000482791 PRKDCP78527 4128 aaKnown RBP0.14□□□□□ -2.39
SNX27-205ENST00000482791 MYO15AQ9UKN7 3530 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 S100A13Q99584 98 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 ST20Q9HBF5 79 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 LPAP08519 4548 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 FAM186AA6NE01 2351 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 LAMA5O15230 3695 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 DOT1LQ8TEK3 1739 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 CLIP1P30622 1438 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 ALMS1Q8TCU4 4167 aa0.13□□□□□ -2.39
SNX27-205ENST00000482791 CNOT1A5YKK6 2376 aaKnown RBP0.12□□□□□ -2.39
SNX27-205ENST00000482791 USP34Q70CQ2 3546 aa0.12□□□□□ -2.39
SNX27-205ENST00000482791 LRRC9Q6ZRR7 1453 aa0.12□□□□□ -2.39
SNX27-205ENST00000482791 CCL22O00626 93 aa0.12□□□□□ -2.39
SNX27-205ENST00000482791 ADIRFQ15847 76 aa0.12□□□□□ -2.39
SNX27-205ENST00000482791 UTRNP46939 3433 aa0.12□□□□□ -2.39
SNX27-205ENST00000482791 CENPEQ02224 2701 aa0.12□□□□□ -2.39
SNX27-205ENST00000482791 ADGRG4Q8IZF6 3080 aa0.12□□□□□ -2.39
SNX27-205ENST00000482791 VPS13CQ709C8 3753 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 SPTBN5Q9NRC6 3674 aaKnown RBP0.11□□□□□ -2.39
SNX27-205ENST00000482791 DCHS2Q6V1P9 2916 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 ERVK-7P63135 1459 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 ARHGAP35Q9NRY4 1499 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 TIAM2Q8IVF5 1701 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 PIK3C2BO00750 1634 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 DCAF1Q9Y4B6 1507 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 MGAQ8IWI9 3026 aa0.11□□□□□ -2.39
SNX27-205ENST00000482791 NCOA2Q15596 1464 aa0.1□□□□□ -2.39
SNX27-205ENST00000482791 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.1□□□□□ -2.39
SNX27-205ENST00000482791 HSPG2P98160 4391 aa0.1□□□□□ -2.39
SNX27-205ENST00000482791 DNAH7Q8WXX0 4024 aa0.1□□□□□ -2.39
SNX27-205ENST00000482791 WDFY3Q8IZQ1 3526 aa0.1□□□□□ -2.39
SNX27-205ENST00000482791 URB2Q14146 1524 aaKnown RBP0.09□□□□□ -2.39
SNX27-205ENST00000482791 H3BUT2 72 aa0.09□□□□□ -2.4
SNX27-205ENST00000482791 SPRR2DP22532 72 aa0.09□□□□□ -2.4
SNX27-205ENST00000482791 CEP170BQ9Y4F5 1589 aaPredicted RBP0.09□□□□□ -2.4
SNX27-205ENST00000482791 DMXL1Q9Y485 3027 aa0.09□□□□□ -2.4
SNX27-205ENST00000482791 RGPD8O14715 1765 aaPredicted RBP0.09□□□□□ -2.4
SNX27-205ENST00000482791 RGPD5Q99666 1765 aa0.09□□□□□ -2.4
SNX27-205ENST00000482791 ARFGEF2Q9Y6D5 1785 aa0.09□□□□□ -2.4
SNX27-205ENST00000482791 CSMD2Q7Z408 3487 aa0.08□□□□□ -2.4
SNX27-205ENST00000482791 RPL38P63173 70 aaKnown RBP0.08□□□□□ -2.4
SNX27-205ENST00000482791 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
SNX27-205ENST00000482791 CDKN2A-AS1Q9UH64 79 aa0.08□□□□□ -2.4
SNX27-205ENST00000482791 LYSTQ99698 3801 aa0.08□□□□□ -2.4
SNX27-205ENST00000482791 TNRC6CQ9HCJ0 1690 aaKnown RBP0.08□□□□□ -2.4
SNX27-205ENST00000482791 STARD9Q9P2P6 4700 aa0.07□□□□□ -2.4
SNX27-205ENST00000482791 PDE4DIPQ5VU43 2346 aa0.07□□□□□ -2.4
SNX27-205ENST00000482791 WFDC13Q8IUB5 93 aa0.07□□□□□ -2.4
SNX27-205ENST00000482791 WNK1Q9H4A3 2382 aa0.07□□□□□ -2.4
SNX27-205ENST00000482791 LRP2P98164 4655 aa0.07□□□□□ -2.4
SNX27-205ENST00000482791 HTTP42858 3142 aa0.07□□□□□ -2.4
SNX27-205ENST00000482791 DNAH14Q0VDD8 3507 aa0.07□□□□□ -2.4
SNX27-205ENST00000482791 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
SNX27-205ENST00000482791 VPS13AQ96RL7 3174 aa0.06□□□□□ -2.4
SNX27-205ENST00000482791 NDUFB1O75438 58 aa0.06□□□□□ -2.4
SNX27-205ENST00000482791 BVES-AS1Q5T3Y7 98 aa0.06□□□□□ -2.4
SNX27-205ENST00000482791 C4AP0C0L4 1744 aa0.06□□□□□ -2.4
SNX27-205ENST00000482791 C4BP0C0L5 1744 aa0.06□□□□□ -2.4
SNX27-205ENST00000482791 CHD7Q9P2D1 2997 aa0.06□□□□□ -2.4
SNX27-205ENST00000482791 SCN11AQ9UI33 1791 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 MAGI3Q5TCQ9 1506 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 KDM5DQ9BY66 1539 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 M0R2T5 61 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 NDUFA3O95167 84 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 IFI6P09912 130 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 KNL1Q8NG31 2342 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 SCRIBQ14160 1630 aa0.05□□□□□ -2.4
SNX27-205ENST00000482791 FRYLO94915 3013 aa0.04□□□□□ -2.4
SNX27-205ENST00000482791 NWD1Q149M9 1564 aa0.04□□□□□ -2.4
SNX27-205ENST00000482791 KRTAP19-6Q3LI70 58 aa0.04□□□□□ -2.4
SNX27-205ENST00000482791 DEFB121Q5J5C9 76 aa0.04□□□□□ -2.4
SNX27-205ENST00000482791 NESP48681 1621 aa0.04□□□□□ -2.4
SNX27-205ENST00000482791 SMG1Q96Q15 3661 aaKnown RBP0.03□□□□□ -2.4
SNX27-205ENST00000482791 UMAD1C9J7I0 102 aa0.03□□□□□ -2.4
SNX27-205ENST00000482791 PRUNE2Q8WUY3 3088 aa0.02□□□□□ -2.41
SNX27-205ENST00000482791 DYNC1H1Q14204 4646 aaKnown RBP0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms