RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
SNX27-205ENST00000482791 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
SNX27-205ENST00000482791 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
SNX27-205ENST00000482791 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
SNX27-205ENST00000482791 FOXD1Q16676 465 aa19.18■□□□□ 0.66
SNX27-205ENST00000482791 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
SNX27-205ENST00000482791 MSH5O43196 834 aa17.93■□□□□ 0.46
SNX27-205ENST00000482791 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
SNX27-205ENST00000482791 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
SNX27-205ENST00000482791 ADRA2BP18089 450 aa17.48■□□□□ 0.39
SNX27-205ENST00000482791 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
SNX27-205ENST00000482791 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
SNX27-205ENST00000482791 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
SNX27-205ENST00000482791 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
SNX27-205ENST00000482791 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
SNX27-205ENST00000482791 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
SNX27-205ENST00000482791 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
SNX27-205ENST00000482791 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
SNX27-205ENST00000482791 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
SNX27-205ENST00000482791 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
SNX27-205ENST00000482791 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
SNX27-205ENST00000482791 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
SNX27-205ENST00000482791 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
SNX27-205ENST00000482791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.09
SNX27-205ENST00000482791 POTEHQ6S545 545 aa14.42□□□□□ -0.1
SNX27-205ENST00000482791 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
SNX27-205ENST00000482791 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
SNX27-205ENST00000482791 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
SNX27-205ENST00000482791 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
SNX27-205ENST00000482791 DSG3P32926 999 aa14.25□□□□□ -0.13
SNX27-205ENST00000482791 CAPN15O75808 1086 aa14.12□□□□□ -0.15
SNX27-205ENST00000482791 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
SNX27-205ENST00000482791 ABCB7O75027 752 aa13.85□□□□□ -0.19
SNX27-205ENST00000482791 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
SNX27-205ENST00000482791 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
SNX27-205ENST00000482791 KCNA4P22459 653 aa13.61□□□□□ -0.23
SNX27-205ENST00000482791 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
SNX27-205ENST00000482791 APLP2Q06481 763 aa13.46□□□□□ -0.25
SNX27-205ENST00000482791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
SNX27-205ENST00000482791 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
SNX27-205ENST00000482791 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
SNX27-205ENST00000482791 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
SNX27-205ENST00000482791 POLA2Q14181 598 aa13.33□□□□□ -0.28
SNX27-205ENST00000482791 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
SNX27-205ENST00000482791 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
SNX27-205ENST00000482791 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
SNX27-205ENST00000482791 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
SNX27-205ENST00000482791 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
SNX27-205ENST00000482791 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
SNX27-205ENST00000482791 EVX2Q03828 476 aa12.95□□□□□ -0.34
SNX27-205ENST00000482791 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
SNX27-205ENST00000482791 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
SNX27-205ENST00000482791 HAX1O00165 279 aa12.91□□□□□ -0.34
SNX27-205ENST00000482791 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNX27-205ENST00000482791 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
SNX27-205ENST00000482791 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
SNX27-205ENST00000482791 ZBTB22O15209 634 aa12.62□□□□□ -0.39
SNX27-205ENST00000482791 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
SNX27-205ENST00000482791 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
SNX27-205ENST00000482791 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
SNX27-205ENST00000482791 GABBR2O75899 941 aa12.48□□□□□ -0.41
SNX27-205ENST00000482791 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
SNX27-205ENST00000482791 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
SNX27-205ENST00000482791 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
SNX27-205ENST00000482791 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
SNX27-205ENST00000482791 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
SNX27-205ENST00000482791 LHX8Q68G74 356 aa12.42□□□□□ -0.42
SNX27-205ENST00000482791 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
SNX27-205ENST00000482791 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
SNX27-205ENST00000482791 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
SNX27-205ENST00000482791 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
SNX27-205ENST00000482791 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
SNX27-205ENST00000482791 FBLN2P98095 1184 aa12.3□□□□□ -0.44
SNX27-205ENST00000482791 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
SNX27-205ENST00000482791 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
SNX27-205ENST00000482791 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNX27-205ENST00000482791 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
SNX27-205ENST00000482791 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
SNX27-205ENST00000482791 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
SNX27-205ENST00000482791 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
SNX27-205ENST00000482791 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
SNX27-205ENST00000482791 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
SNX27-205ENST00000482791 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
SNX27-205ENST00000482791 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
SNX27-205ENST00000482791 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
SNX27-205ENST00000482791 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
SNX27-205ENST00000482791 CLCN6P51797 869 aa11.82□□□□□ -0.52
SNX27-205ENST00000482791 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
SNX27-205ENST00000482791 POTEMA6NI47 508 aa11.72□□□□□ -0.53
SNX27-205ENST00000482791 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
SNX27-205ENST00000482791 POTEJP0CG39 1038 aa11.7□□□□□ -0.54
SNX27-205ENST00000482791 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
SNX27-205ENST00000482791 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
SNX27-205ENST00000482791 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
SNX27-205ENST00000482791 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
SNX27-205ENST00000482791 LCE2DQ5TA82 110 aaPredicted RBP11.61□□□□□ -0.55
SNX27-205ENST00000482791 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
SNX27-205ENST00000482791 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
SNX27-205ENST00000482791 MS4A3Q96HJ5 214 aa11.51□□□□□ -0.57
SNX27-205ENST00000482791 METRNQ9UJH8 293 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms