RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TENM1Q9UKZ4 2725 aa6.11□□□□□ -1.43
VEGFA-212ENST00000480614 HRES1P13985 223 aa6.11□□□□□ -1.43
VEGFA-212ENST00000480614 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
VEGFA-212ENST00000480614 A0A1B0GU33 70 aa6.1□□□□□ -1.43
VEGFA-212ENST00000480614 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
VEGFA-212ENST00000480614 MGAQ8IWI9 3026 aa6.09□□□□□ -1.43
VEGFA-212ENST00000480614 A0A1W2PNM2 257 aa6.09□□□□□ -1.43
VEGFA-212ENST00000480614 A0A1W2PNN7 141 aa6.09□□□□□ -1.43
VEGFA-212ENST00000480614 A0A096LNT2 108 aa6.09□□□□□ -1.43
VEGFA-212ENST00000480614 EIF4EBP3O60516 100 aaPredicted RBP6.09□□□□□ -1.44
VEGFA-212ENST00000480614 Q5XG85 94 aa6.08□□□□□ -1.44
VEGFA-212ENST00000480614 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
VEGFA-212ENST00000480614 SMR3BP02814 79 aaPredicted RBP6.07□□□□□ -1.44
VEGFA-212ENST00000480614 CHD7Q9P2D1 2997 aa6.07□□□□□ -1.44
VEGFA-212ENST00000480614 KALRNO60229 2985 aa6.06□□□□□ -1.44
VEGFA-212ENST00000480614 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
VEGFA-212ENST00000480614 A0A0G2JQZ4 141 aa6.06□□□□□ -1.44
VEGFA-212ENST00000480614 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.441e-6■■□□□ 12.5
VEGFA-212ENST00000480614 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
VEGFA-212ENST00000480614 LRBAP50851 2863 aa6.04□□□□□ -1.44
VEGFA-212ENST00000480614 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
VEGFA-212ENST00000480614 CELSR2Q9HCU4 2923 aa6.03□□□□□ -1.44
VEGFA-212ENST00000480614 H3BS24 57 aa6.02□□□□□ -1.45
VEGFA-212ENST00000480614 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
VEGFA-212ENST00000480614 M0R2T5 61 aa6.01□□□□□ -1.45
VEGFA-212ENST00000480614 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
VEGFA-212ENST00000480614 S4R3F8 94 aa6.01□□□□□ -1.45
VEGFA-212ENST00000480614 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
VEGFA-212ENST00000480614 A0A0A0MQY5 61 aa6□□□□□ -1.45
VEGFA-212ENST00000480614 FP248Q71RG6 208 aaPredicted RBP6□□□□□ -1.45
VEGFA-212ENST00000480614 CASC10Q5T4H9 136 aa5.99□□□□□ -1.45
VEGFA-212ENST00000480614 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
VEGFA-212ENST00000480614 FRYLO94915 3013 aa5.98□□□□□ -1.45
VEGFA-212ENST00000480614 KRTAP10-3P60369 221 aa5.98□□□□□ -1.45
VEGFA-212ENST00000480614 Q8N9P0 234 aaPredicted RBP5.97□□□□□ -1.45
VEGFA-212ENST00000480614 LAMA2P24043 3122 aaKnown RBP5.96□□□□□ -1.46
VEGFA-212ENST00000480614 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
VEGFA-212ENST00000480614 TNP2Q05952 138 aa5.94□□□□□ -1.46
VEGFA-212ENST00000480614 C5orf42Q9H799 3197 aa5.93□□□□□ -1.46
VEGFA-212ENST00000480614 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.93□□□□□ -1.46
VEGFA-212ENST00000480614 Q5VV11 94 aa5.92□□□□□ -1.46
VEGFA-212ENST00000480614 PLAC8Q9NZF1 115 aa5.92□□□□□ -1.46
VEGFA-212ENST00000480614 KRTAP1-3Q8IUG1 177 aa5.91□□□□□ -1.46
VEGFA-212ENST00000480614 FRYQ5TBA9 3013 aa5.91□□□□□ -1.46
VEGFA-212ENST00000480614 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
VEGFA-212ENST00000480614 ASH1LQ9NR48 2969 aaKnown RBP5.89□□□□□ -1.47
VEGFA-212ENST00000480614 KRTAP1-1Q07627 177 aa5.89□□□□□ -1.47
VEGFA-212ENST00000480614 Q5W150 140 aa5.88□□□□□ -1.47
VEGFA-212ENST00000480614 SPRR1AP35321 89 aa5.88□□□□□ -1.47
VEGFA-212ENST00000480614 R4GN34 69 aa5.88□□□□□ -1.47
VEGFA-212ENST00000480614 TENM4Q6N022 2769 aa5.87□□□□□ -1.47
VEGFA-212ENST00000480614 SPRR1BP22528 89 aa5.86□□□□□ -1.47
VEGFA-212ENST00000480614 CYSTM1Q9H1C7 97 aa5.86□□□□□ -1.47
VEGFA-212ENST00000480614 SPINK7P58062 85 aa5.84□□□□□ -1.47
VEGFA-212ENST00000480614 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
VEGFA-212ENST00000480614 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
VEGFA-212ENST00000480614 ROMO1P60602 79 aa5.82□□□□□ -1.48
VEGFA-212ENST00000480614 TNRC18O15417 2968 aaPredicted RBP5.82□□□□□ -1.48
VEGFA-212ENST00000480614 TRIOO75962 3097 aa5.82□□□□□ -1.48
VEGFA-212ENST00000480614 PDZD2O15018 2839 aa5.81□□□□□ -1.48
VEGFA-212ENST00000480614 ZZEF1O43149 2961 aa5.8□□□□□ -1.48
VEGFA-212ENST00000480614 OXTP01178 125 aa5.79□□□□□ -1.48
VEGFA-212ENST00000480614 CRYBG3Q68DQ2 2970 aa5.79□□□□□ -1.48
VEGFA-212ENST00000480614 ZANQ9Y493 2812 aa5.79□□□□□ -1.48
VEGFA-212ENST00000480614 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
VEGFA-212ENST00000480614 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
VEGFA-212ENST00000480614 DCHS2Q6V1P9 2916 aa5.78□□□□□ -1.48
VEGFA-212ENST00000480614 H1FX-AS1Q4G0G2 97 aa5.77□□□□□ -1.49
VEGFA-212ENST00000480614 TACC2O95359 2948 aa5.77□□□□□ -1.49
VEGFA-212ENST00000480614 Q6ZR54 194 aa5.75□□□□□ -1.49
VEGFA-212ENST00000480614 Q5VSD8 79 aa5.75□□□□□ -1.49
VEGFA-212ENST00000480614 DMXL2Q8TDJ6 3036 aa5.74□□□□□ -1.49
VEGFA-212ENST00000480614 M0QZ58 72 aa5.74□□□□□ -1.49
VEGFA-212ENST00000480614 PCNTO95613 3336 aa5.73□□□□□ -1.49
VEGFA-212ENST00000480614 GOLGB1Q14789 3259 aaKnown RBP5.73□□□□□ -1.49
VEGFA-212ENST00000480614 A0A087X002 238 aa5.71□□□□□ -1.5
VEGFA-212ENST00000480614 VPS13AQ96RL7 3174 aa5.7□□□□□ -1.5
VEGFA-212ENST00000480614 PKD1L1Q8TDX9 2849 aa5.7□□□□□ -1.5
VEGFA-212ENST00000480614 PANO1I0J062 215 aa5.7□□□□□ -1.5
VEGFA-212ENST00000480614 LCE6AA0A183 80 aa5.69□□□□□ -1.5
VEGFA-212ENST00000480614 PRUNE2Q8WUY3 3088 aa5.68□□□□□ -1.5
VEGFA-212ENST00000480614 KRTAP26-1Q6PEX3 210 aa5.68□□□□□ -1.5
VEGFA-212ENST00000480614 NBEAQ8NFP9 2946 aa5.68□□□□□ -1.5
VEGFA-212ENST00000480614 TGP01266 2768 aa5.67□□□□□ -1.5
VEGFA-212ENST00000480614 VWFP04275 2813 aa5.67□□□□□ -1.5
VEGFA-212ENST00000480614 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
VEGFA-212ENST00000480614 Q8NDZ9 215 aa5.66□□□□□ -1.5
VEGFA-212ENST00000480614 A6NN06 94 aa5.65□□□□□ -1.51
VEGFA-212ENST00000480614 KRTAP10-1P60331 282 aa5.64□□□□□ -1.51
VEGFA-212ENST00000480614 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
VEGFA-212ENST00000480614 COL12A1Q99715 3063 aa5.64□□□□□ -1.51
VEGFA-212ENST00000480614 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
VEGFA-212ENST00000480614 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
VEGFA-212ENST00000480614 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
VEGFA-212ENST00000480614 KRTAP1-5Q9BYS1 174 aa5.62□□□□□ -1.51
VEGFA-212ENST00000480614 FBN2P35556 2912 aa5.61□□□□□ -1.51
VEGFA-212ENST00000480614 WDFY4Q6ZS81 3184 aa5.58□□□□□ -1.52
VEGFA-212ENST00000480614 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
VEGFA-212ENST00000480614 MXRA5Q9NR99 2828 aa5.57□□□□□ -1.52
VEGFA-212ENST00000480614 KRTAP29-1A8MX34 341 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms