RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 TRACP01848 142 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 C4orf48Q5BLP8 95 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 LYRM7Q5U5X0 104 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 Q6ZQY7 126 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 Q8N377 158 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 C3orf22Q8N5N4 141 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
HDAC6-223ENST00000480525 TMEM256-PLSCR3K7ERE1 68 aa2.92□□□□□ -1.94
HDAC6-223ENST00000480525 TRIAP1O43715 76 aa2.92□□□□□ -1.94
HDAC6-223ENST00000480525 TSPAN13O95857 204 aa2.92□□□□□ -1.94
HDAC6-223ENST00000480525 MOBPQ13875 183 aa2.92□□□□□ -1.94
HDAC6-223ENST00000480525 ST20-AS1Q8NBB2 130 aa2.92□□□□□ -1.94
HDAC6-223ENST00000480525 CLEC2BQ92478 149 aa2.92□□□□□ -1.94
HDAC6-223ENST00000480525 TRBV20-1A0A075B6N2 111 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 A0A1B0GW54 56 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 F8WEM9 126 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 LST1O00453 97 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 DNAL4O96015 105 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 UBE2V1Q13404 147 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 Q1RN00 199 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
HDAC6-223ENST00000480525 IGLV9-49A0A0B4J1Y8 123 aa2.9□□□□□ -1.95
HDAC6-223ENST00000480525 H7C2G1 150 aa2.9□□□□□ -1.95
HDAC6-223ENST00000480525 C9orf153Q5TBE3 101 aa2.9□□□□□ -1.95
HDAC6-223ENST00000480525 FAM218AQ96MZ4 157 aa2.9□□□□□ -1.95
HDAC6-223ENST00000480525 ORMDL1Q9P0S3 153 aa2.9□□□□□ -1.95
HDAC6-223ENST00000480525 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.95
HDAC6-223ENST00000480525 LRP2P98164 4655 aa2.9□□□□□ -1.95
HDAC6-223ENST00000480525 PSMB2P49721 201 aa2.89□□□□□ -1.95
HDAC6-223ENST00000480525 NDUFV3P56181 108 aaKnown RBP2.89□□□□□ -1.95
HDAC6-223ENST00000480525 SNHG12Q9BXW3 62 aa2.89□□□□□ -1.95
HDAC6-223ENST00000480525 SS18L2Q9UHA2 77 aa2.89□□□□□ -1.95
HDAC6-223ENST00000480525 TRBV7-4A0A0J9YYF1 115 aa2.88□□□□□ -1.95
HDAC6-223ENST00000480525 A0A1B0GV90 55 aa2.88□□□□□ -1.95
HDAC6-223ENST00000480525 K7ERJ3 54 aa2.88□□□□□ -1.95
HDAC6-223ENST00000480525 TCL1BO95988 128 aa2.88□□□□□ -1.95
HDAC6-223ENST00000480525 PDE6GP18545 87 aa2.88□□□□□ -1.95
HDAC6-223ENST00000480525 TEN1Q86WV5 123 aa2.88□□□□□ -1.95
HDAC6-223ENST00000480525 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
HDAC6-223ENST00000480525 TRBV7-7A0A0K0K1E9 115 aa2.87□□□□□ -1.95
HDAC6-223ENST00000480525 JMJD7-PLA2G4BH0Y9G9 81 aa2.87□□□□□ -1.95
HDAC6-223ENST00000480525 ATXN8Q156A1 80 aa2.87□□□□□ -1.95
HDAC6-223ENST00000480525 IGFL1Q6UW32 110 aa2.87□□□□□ -1.95
HDAC6-223ENST00000480525 DEFB105AQ8NG35 78 aa2.87□□□□□ -1.95
HDAC6-223ENST00000480525 IGLV7-46A0A075B6I9 117 aa2.86□□□□□ -1.95
HDAC6-223ENST00000480525 C9orf118A6NHY6 69 aa2.86□□□□□ -1.95
HDAC6-223ENST00000480525 H3BMG7 143 aa2.86□□□□□ -1.95
HDAC6-223ENST00000480525 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
HDAC6-223ENST00000480525 H3BT86 120 aa2.85□□□□□ -1.95
HDAC6-223ENST00000480525 SCGB1C2P0DMR2 95 aa2.85□□□□□ -1.95
HDAC6-223ENST00000480525 PCP4P48539 62 aa2.85□□□□□ -1.95
HDAC6-223ENST00000480525 PRR4Q16378 134 aa2.85□□□□□ -1.95
HDAC6-223ENST00000480525 COL5A1-AS1Q5SY13 56 aa2.85□□□□□ -1.95
HDAC6-223ENST00000480525 OBSCN-AS1Q96MR7 158 aa2.85□□□□□ -1.95
HDAC6-223ENST00000480525 LOC110117498A0A087WWA1 95 aa2.84□□□□□ -1.95
HDAC6-223ENST00000480525 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
HDAC6-223ENST00000480525 TAX1BP3O14907 124 aa2.84□□□□□ -1.95
HDAC6-223ENST00000480525 RBM3P98179 157 aaKnown RBP2.84□□□□□ -1.95
HDAC6-223ENST00000480525 XP32Q5T750 250 aa2.84□□□□□ -1.95
HDAC6-223ENST00000480525 ANKRD29Q8N6D5 301 aa2.84□□□□□ -1.95
HDAC6-223ENST00000480525 BAALC-AS2P0C853 105 aa2.83□□□□□ -1.96
HDAC6-223ENST00000480525 FABP2P12104 132 aa2.83□□□□□ -1.96
HDAC6-223ENST00000480525 C1orf195Q5TG92 126 aa2.83□□□□□ -1.96
HDAC6-223ENST00000480525 DSCR8Q96T75 97 aa2.83□□□□□ -1.96
HDAC6-223ENST00000480525 A0A1W2PNM2 257 aa2.82□□□□□ -1.96
HDAC6-223ENST00000480525 H3BUT2 72 aa2.82□□□□□ -1.96
HDAC6-223ENST00000480525 CDIP1Q9H305 208 aa2.82□□□□□ -1.96
HDAC6-223ENST00000480525 C9JAW5 83 aa2.81□□□□□ -1.96
HDAC6-223ENST00000480525 J3KT08 172 aa2.81□□□□□ -1.96
HDAC6-223ENST00000480525 RETNLBQ9BQ08 111 aa2.81□□□□□ -1.96
HDAC6-223ENST00000480525 LPAP08519 4548 aa2.81□□□□□ -1.96
HDAC6-223ENST00000480525 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
HDAC6-223ENST00000480525 CCKP06307 115 aa2.8□□□□□ -1.96
HDAC6-223ENST00000480525 SEC61BP60468 96 aaKnown RBP2.8□□□□□ -1.96
HDAC6-223ENST00000480525 Q6ZQT0 140 aa2.8□□□□□ -1.96
HDAC6-223ENST00000480525 Q96NJ1 140 aa2.8□□□□□ -1.96
HDAC6-223ENST00000480525 A0A087WSZ3 146 aa2.79□□□□□ -1.96
HDAC6-223ENST00000480525 BATFQ16520 125 aa2.79□□□□□ -1.96
HDAC6-223ENST00000480525 LINC00472Q9H8W2 130 aa2.79□□□□□ -1.96
HDAC6-223ENST00000480525 SPCS1Q9Y6A9 102 aa2.79□□□□□ -1.96
HDAC6-223ENST00000480525 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
HDAC6-223ENST00000480525 A0A0U1RQV1 116 aa2.78□□□□□ -1.96
HDAC6-223ENST00000480525 F8W1H4 67 aa2.78□□□□□ -1.96
HDAC6-223ENST00000480525 K7EP34 96 aa2.78□□□□□ -1.96
HDAC6-223ENST00000480525 HRCT1Q6UXD1 115 aa2.78□□□□□ -1.96
HDAC6-223ENST00000480525 GTF2H5Q6ZYL4 71 aa2.78□□□□□ -1.96
HDAC6-223ENST00000480525 Q75L30 129 aa2.78□□□□□ -1.96
HDAC6-223ENST00000480525 MUC2Q02817 5179 aa2.77□□□□□ -1.97
HDAC6-223ENST00000480525 A0A0G2JQZ4 141 aa2.77□□□□□ -1.97
HDAC6-223ENST00000480525 C8orf87E5RJ46 101 aa2.77□□□□□ -1.97
HDAC6-223ENST00000480525 RPL37P61927 97 aaKnown RBP2.77□□□□□ -1.97
HDAC6-223ENST00000480525 C20orf166-AS1Q96NR2 134 aa2.77□□□□□ -1.97
HDAC6-223ENST00000480525 PRO0461Q9UI25 63 aa2.77□□□□□ -1.97
HDAC6-223ENST00000480525 NAA38Q9BRA0 125 aaKnown RBP2.76□□□□□ -1.97
HDAC6-223ENST00000480525 A8MUU9 505 aa2.75□□□□□ -1.97
HDAC6-223ENST00000480525 NDUFB1O75438 58 aa2.74□□□□□ -1.97
HDAC6-223ENST00000480525 C14orf132Q9NPU4 83 aa2.74□□□□□ -1.97
HDAC6-223ENST00000480525 FAM240AA0A1B0GVK7 77 aa2.73□□□□□ -1.97
HDAC6-223ENST00000480525 A0A1B0GVX0 72 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms