RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 FAM168BA1KXE4 195 aa3.82□□□□□ -1.8
CPS1-207ENST00000479988 IGLV5-37A0A075B6J1 123 aa3.82□□□□□ -1.8
CPS1-207ENST00000479988 SSBP3-AS1Q7Z2R9 100 aa3.82□□□□□ -1.8
CPS1-207ENST00000479988 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
CPS1-207ENST00000479988 Q6ZRX8 168 aa3.82□□□□□ -1.8
CPS1-207ENST00000479988 NDUFC1O43677 76 aa3.81□□□□□ -1.8
CPS1-207ENST00000479988 CASC2Q6XLA1 102 aa3.81□□□□□ -1.8
CPS1-207ENST00000479988 A0A087WSZ3 146 aa3.81□□□□□ -1.8
CPS1-207ENST00000479988 LINC01547P58512 204 aaPredicted RBP3.81□□□□□ -1.8
CPS1-207ENST00000479988 KRTAP26-1Q6PEX3 210 aa3.81□□□□□ -1.8
CPS1-207ENST00000479988 ATP11AUNQ6ZP68 121 aa3.8□□□□□ -1.8
CPS1-207ENST00000479988 KRTAP1-5Q9BYS1 174 aa3.8□□□□□ -1.8
CPS1-207ENST00000479988 KRTAP10-1P60331 282 aa3.8□□□□□ -1.8
CPS1-207ENST00000479988 KRTAP10-2P60368 255 aa3.8□□□□□ -1.8
CPS1-207ENST00000479988 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
CPS1-207ENST00000479988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.8□□□□□ -1.8
CPS1-207ENST00000479988 TRBV7-4A0A0J9YYF1 115 aa3.8□□□□□ -1.8
CPS1-207ENST00000479988 A8MUN3 132 aa3.79□□□□□ -1.8
CPS1-207ENST00000479988 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
CPS1-207ENST00000479988 A0A1W2PNN7 141 aa3.79□□□□□ -1.8
CPS1-207ENST00000479988 C9orf129Q5T035 196 aaKnown RBP3.79□□□□□ -1.8
CPS1-207ENST00000479988 A0A087WVE0 104 aa3.79□□□□□ -1.8
CPS1-207ENST00000479988 CHKB-CPT1BH3BT56 60 aa3.79□□□□□ -1.8
CPS1-207ENST00000479988 C20orf197Q8N268 126 aa3.79□□□□□ -1.8
CPS1-207ENST00000479988 PLAC8Q9NZF1 115 aa3.79□□□□□ -1.8
CPS1-207ENST00000479988 LCA10Q71F78 164 aa3.78□□□□□ -1.8
CPS1-207ENST00000479988 ATP5EP56381 51 aaPredicted RBP3.78□□□□□ -1.8
CPS1-207ENST00000479988 SMG1Q96Q15 3661 aaKnown RBP3.77□□□□□ -1.81
CPS1-207ENST00000479988 PDZD2O15018 2839 aa3.77□□□□□ -1.81
CPS1-207ENST00000479988 SPINK1P00995 79 aa3.77□□□□□ -1.81
CPS1-207ENST00000479988 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
CPS1-207ENST00000479988 IGLV7-46A0A075B6I9 117 aa3.76□□□□□ -1.81
CPS1-207ENST00000479988 Q8NDZ9 215 aa3.76□□□□□ -1.81
CPS1-207ENST00000479988 IGLV5-48A0A075B6I7 105 aa3.75□□□□□ -1.81
CPS1-207ENST00000479988 WFDC13Q8IUB5 93 aa3.75□□□□□ -1.81
CPS1-207ENST00000479988 PSPHP1O15172 72 aa3.75□□□□□ -1.81
CPS1-207ENST00000479988 Q8N377 158 aa3.75□□□□□ -1.81
CPS1-207ENST00000479988 FLG2Q5D862 2391 aaPredicted RBP3.75□□□□□ -1.81
CPS1-207ENST00000479988 SPRR1AP35321 89 aa3.75□□□□□ -1.81
CPS1-207ENST00000479988 Q8N1X5 172 aa3.75□□□□□ -1.81
CPS1-207ENST00000479988 TENM3Q9P273 2699 aa3.74□□□□□ -1.81
CPS1-207ENST00000479988 LINC00313P59037 77 aa3.74□□□□□ -1.81
CPS1-207ENST00000479988 FAM229BQ4G0N7 80 aa3.74□□□□□ -1.81
CPS1-207ENST00000479988 ST20-AS1Q8NBB2 130 aa3.74□□□□□ -1.81
CPS1-207ENST00000479988 ERC2-IT1O76042 136 aa3.73□□□□□ -1.81
CPS1-207ENST00000479988 SPRR4Q96PI1 79 aa3.73□□□□□ -1.81
CPS1-207ENST00000479988 TENM2Q9NT68 2774 aa3.73□□□□□ -1.81
CPS1-207ENST00000479988 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
CPS1-207ENST00000479988 Q96NJ1 140 aa3.72□□□□□ -1.81
CPS1-207ENST00000479988 TENM1Q9UKZ4 2725 aa3.72□□□□□ -1.81
CPS1-207ENST00000479988 SPENQ96T58 3664 aaKnown RBP3.71□□□□□ -1.81
CPS1-207ENST00000479988 MPLKIPQ8TAP9 179 aa3.7□□□□□ -1.82
CPS1-207ENST00000479988 TMEM254Q8TBM7 123 aa3.7□□□□□ -1.82
CPS1-207ENST00000479988 CELSR1Q9NYQ6 3014 aa3.7□□□□□ -1.82
CPS1-207ENST00000479988 RETNLBQ9BQ08 111 aa3.7□□□□□ -1.82
CPS1-207ENST00000479988 PKD1L1Q8TDX9 2849 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 HCG22E2RYF7 251 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 C9orf92A6NGG3 77 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 KLKP1Q107X0 134 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 DEFB116Q30KQ4 102 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 Q6ZSA8 131 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 C7orf65Q6ZTY9 151 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 SPTSSBQ8NFR3 76 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 SNURFQ9Y675 71 aa3.69□□□□□ -1.82
CPS1-207ENST00000479988 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
CPS1-207ENST00000479988 IGKV2D-30A0A075B6S6 120 aa3.68□□□□□ -1.82
CPS1-207ENST00000479988 KRTAP4-16G5E9R7 235 aaPredicted RBP3.68□□□□□ -1.82
CPS1-207ENST00000479988 IGKV2-30P06310 120 aa3.68□□□□□ -1.82
CPS1-207ENST00000479988 LINC01554Q52M75 96 aa3.68□□□□□ -1.82
CPS1-207ENST00000479988 Q6ZRN7 208 aaPredicted RBP3.68□□□□□ -1.82
CPS1-207ENST00000479988 M0R2T5 61 aa3.68□□□□□ -1.82
CPS1-207ENST00000479988 H3BPC8 53 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 A6NED7 52 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 SPRR1BP22528 89 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 hDV103S1A0JD37 113 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 FBN3Q75N90 2809 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 Q8N9L7 120 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CPS1-207ENST00000479988 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
CPS1-207ENST00000479988 SMIM29Q86T20 159 aa3.65□□□□□ -1.83
CPS1-207ENST00000479988 TP53AIP1Q9HCN2 124 aa3.65□□□□□ -1.83
CPS1-207ENST00000479988 TGP01266 2768 aa3.64□□□□□ -1.83
CPS1-207ENST00000479988 A8MWP4 228 aa3.64□□□□□ -1.83
CPS1-207ENST00000479988 ANK3Q12955 4377 aaKnown RBP3.63□□□□□ -1.83
CPS1-207ENST00000479988 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
CPS1-207ENST00000479988 K7EQZ3 153 aa3.62□□□□□ -1.83
CPS1-207ENST00000479988 LINC00208Q96KT6 92 aa3.62□□□□□ -1.83
CPS1-207ENST00000479988 H7BZZ5 65 aa3.62□□□□□ -1.83
CPS1-207ENST00000479988 FP248Q71RG6 208 aaPredicted RBP3.62□□□□□ -1.83
CPS1-207ENST00000479988 OCR1Q9BZK8 76 aa3.62□□□□□ -1.83
CPS1-207ENST00000479988 K7ERS5 55 aa3.61□□□□□ -1.83
CPS1-207ENST00000479988 H0Y9P7 68 aa3.61□□□□□ -1.83
CPS1-207ENST00000479988 ZFHX3Q15911 3703 aa3.6□□□□□ -1.83
CPS1-207ENST00000479988 DSCR10P59022 87 aa3.6□□□□□ -1.83
CPS1-207ENST00000479988 SVEP1Q4LDE5 3571 aa3.59□□□□□ -1.83
CPS1-207ENST00000479988 PANO1I0J062 215 aa3.59□□□□□ -1.83
CPS1-207ENST00000479988 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
CPS1-207ENST00000479988 VWFP04275 2813 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms