RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 TIMM21Q9BVV7 248 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 TTTY13Q9BZ97 58 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
CCDC171-207ENST00000478913 E7EUB6 86 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 ATOX1O00244 68 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 IGHV3-30P01768 117 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 TRACP01848 142 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 IGHV3-30-5P0DP03 117 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 RPL18AQ02543 176 aaKnown RBP2.42□□□□□ -2.02
CCDC171-207ENST00000478913 LINC00643Q86TS7 51 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 C3orf22Q8N5N4 141 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 CARD19Q96LW7 228 aa2.42□□□□□ -2.02
CCDC171-207ENST00000478913 TRAV41A0A0B4J266 112 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 TRAV4A0A0B4J268 109 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 IGKV2-24A0A0C4DH68 120 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 TRBV7-7A0A0K0K1E9 115 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 FAM223BA6NKX1 122 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 I3L3M4 83 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 TIMM17BO60830 172 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 DNAL4O96015 105 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 IGHV3-33P01772 117 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 TRGV3P03979 118 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 CTSGP08311 255 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 RNASE4P34096 147 aaKnown RBP2.41□□□□□ -2.02
CCDC171-207ENST00000478913 ZNF80P51504 273 aaPredicted RBP2.41□□□□□ -2.02
CCDC171-207ENST00000478913 DIAPH2-AS1Q14236 149 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 MUSTN1Q8IVN3 82 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 FAM223AQ8IWN6 122 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 C1orf64Q8NEQ6 169 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 TMEM263Q8WUH6 116 aaKnown RBP2.41□□□□□ -2.02
CCDC171-207ENST00000478913 AGPAT4-IT1Q9H0P7 198 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 ICOSQ9Y6W8 199 aa2.41□□□□□ -2.02
CCDC171-207ENST00000478913 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 NDUFC2O95298 119 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 SPART-AS1P0CW21 52 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 CMC4P56277 68 aaPredicted RBP2.4□□□□□ -2.03
CCDC171-207ENST00000478913 TMEM258P61165 79 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 SNRPD3P62318 126 aaKnown RBP2.4□□□□□ -2.03
CCDC171-207ENST00000478913 PMAIP1Q13794 54 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 MIAQ16674 131 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 LINC00526Q96FQ7 95 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
CCDC171-207ENST00000478913 TRAV8-3A0A0A6YYJ7 113 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 TRBV6-5A0A0K0K1A5 114 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 TRBV27A0A0K0K1C4 114 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 TEX49A0A1B0GTD5 131 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 IGIPA6NJ69 53 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 H3BUA1 57 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 LST1O00453 97 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 NDUFA4O00483 81 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 PSCAO43653 123 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 TRBV12-3P01733 135 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 DAND5Q8N907 189 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 RPL39LQ96EH5 51 aaKnown RBP2.39□□□□□ -2.03
CCDC171-207ENST00000478913 USMG5Q96IX5 58 aa2.39□□□□□ -2.03
CCDC171-207ENST00000478913 TRAV13-2A0A0B4J235 113 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 IGHV1-58A0A0C4DH39 117 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 H0YGX0 51 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 COX7CP15954 63 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 HERVK_113P63121 156 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 C6orf99Q4VX62 202 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 FAM74A4Q5TZK3 123 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 ATP5EP2Q5VTU8 51 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 ODF3Q96PU9 254 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 PKIGQ9Y2B9 76 aa2.38□□□□□ -2.03
CCDC171-207ENST00000478913 IGHV3-64A0A075B6Q5 118 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 COX7A2LO14548 114 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 CRPP02741 224 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 BAALC-AS2P0C853 105 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 IGHV3-30-3P0DP02 117 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 ZNF22P17026 224 aaPredicted RBP2.37□□□□□ -2.03
CCDC171-207ENST00000478913 SPRR2DP22532 72 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 POLR2KP53803 58 aaKnown RBP2.37□□□□□ -2.03
CCDC171-207ENST00000478913 ESRGQ1W209 222 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 LAMTOR3Q9UHA4 124 aa2.37□□□□□ -2.03
CCDC171-207ENST00000478913 TRAV13-1A0A0B4J241 112 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 TRAV12-3A0A0B4J271 114 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 FAM236DA0A1B0GTK5 79 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 hADV29S1A0JD25 119 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 H3BQ85 93 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 PSPHP1O15172 72 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 NDUFA1O15239 70 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 GNRH2O43555 120 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 FAM236CP0DP71 79 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 NPC2P61916 151 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 RPL39P62891 51 aaKnown RBP2.36□□□□□ -2.03
CCDC171-207ENST00000478913 MRPS36P82909 103 aaKnown RBP2.36□□□□□ -2.03
CCDC171-207ENST00000478913 KLK9Q2XQG4 91 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 Q6ZQT7 251 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 GPHB5Q86YW7 130 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 Q8N6K4 173 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 ZFAND2AQ8N6M9 145 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 SERP2Q8N6R1 65 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 LINC01587Q99440 93 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms