RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 F8P00451 2351 aa1.21□□□□□ -2.22
CDK13-204ENST00000478563 SMG1Q96Q15 3661 aaKnown RBP1.21□□□□□ -2.22
CDK13-204ENST00000478563 BCORQ6W2J9 1755 aa1.21□□□□□ -2.22
CDK13-204ENST00000478563 ZNF469Q96JG9 3925 aaPredicted RBP1.21□□□□□ -2.22
CDK13-204ENST00000478563 URB1O60287 2271 aaKnown RBP1.2□□□□□ -2.22
CDK13-204ENST00000478563 TENM4Q6N022 2769 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 NBEAQ8NFP9 2946 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 RYR1P21817 5038 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 NHSQ6T4R5 1651 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 FAM186AA6NE01 2351 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 VPS13AQ96RL7 3174 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 RYR3Q15413 4870 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 CCDC168Q8NDH2 2452 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 TRBV7-4A0A0J9YYF1 115 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 TRBV6-1A0A0K0K1D8 114 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 H0Y9P7 68 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 SPINK4O60575 86 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 GAFA1Q96PS6 74 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 UBL5Q9BZL1 73 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 LINC00846Q9NV44 126 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 CREBBPQ92793 2442 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 BIRC6Q9NR09 4857 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 FLNCQ14315 2725 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 NFAT5O94916 1531 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
CDK13-204ENST00000478563 NBEAL2Q6ZNJ1 2754 aa1.19□□□□□ -2.22
CDK13-204ENST00000478563 LOC400499M0QZD8 3231 aa1.19□□□□□ -2.22
CDK13-204ENST00000478563 PKD1L1Q8TDX9 2849 aa1.19□□□□□ -2.22
CDK13-204ENST00000478563 ZZEF1O43149 2961 aa1.19□□□□□ -2.22
CDK13-204ENST00000478563 HMGA1P17096 107 aaKnown RBP1.19□□□□□ -2.22
CDK13-204ENST00000478563 DEFB112Q30KQ8 113 aa1.19□□□□□ -2.22
CDK13-204ENST00000478563 VWFP04275 2813 aa1.19□□□□□ -2.22
CDK13-204ENST00000478563 PLCE1Q9P212 2302 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 GVINP1Q7Z2Y8 2422 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 KIAA1109Q2LD37 5005 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 LRRK2Q5S007 2527 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 IGSF10Q6WRI0 2623 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 TP53AIP1Q9HCN2 124 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 TRPM2O94759 1503 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 SPTA1P02549 2419 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 EIF2AK4Q9P2K8 1649 aaKnown RBP1.18□□□□□ -2.22
CDK13-204ENST00000478563 FREM2Q5SZK8 3169 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 TLN1Q9Y490 2541 aaKnown RBP1.18□□□□□ -2.22
CDK13-204ENST00000478563 CD163L1Q9NR16 1453 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 MYO15AQ9UKN7 3530 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 QSER1Q2KHR3 1735 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 NRAPQ86VF7 1730 aa1.18□□□□□ -2.22
CDK13-204ENST00000478563 PARP4Q9UKK3 1724 aaKnown RBP1.18□□□□□ -2.22
CDK13-204ENST00000478563 RIF1Q5UIP0 2472 aaKnown RBP1.17□□□□□ -2.22
CDK13-204ENST00000478563 STAB1Q9NY15 2570 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 PDZD2O15018 2839 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 C5P01031 1676 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 WDR87Q6ZQQ6 2873 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 SMIM27A0A1W2PRY6 76 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 M0R1W7 72 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 PLNP26678 52 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 SNRPGP62308 76 aaKnown RBP1.17□□□□□ -2.22
CDK13-204ENST00000478563 SERF2P84101 59 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 C4AP0C0L4 1744 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 C4BP0C0L5 1744 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 COL12A1Q99715 3063 aa1.17□□□□□ -2.22
CDK13-204ENST00000478563 ZNF831Q5JPB2 1677 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 ANKHD1Q8IWZ3 2542 aaKnown RBP1.16□□□□□ -2.22
CDK13-204ENST00000478563 DDX60Q8IY21 1712 aaKnown RBP1.16□□□□□ -2.22
CDK13-204ENST00000478563 NBPF19A0A087WUL8 3843 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 CELSR1Q9NYQ6 3014 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 NBEAL1Q6ZS30 2694 aa1.16□□□□□ -2.22
CDK13-204ENST00000478563 DOPEY2Q9Y3R5 2298 aa1.15□□□□□ -2.22
CDK13-204ENST00000478563 DDX60LQ5H9U9 1706 aaKnown RBP1.15□□□□□ -2.22
CDK13-204ENST00000478563 NF1P21359 2839 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 A0A1B0GU69 56 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 I3L3M4 83 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 NDUFA4O00483 81 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 NDUFA3O95167 84 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 FRAS1Q86XX4 4008 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 FAM208AQ9UK61 1670 aaKnown RBP1.15□□□□□ -2.23
CDK13-204ENST00000478563 CRYBG3Q68DQ2 2970 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 FRYLO94915 3013 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 DOT1LQ8TEK3 1739 aa1.15□□□□□ -2.23
CDK13-204ENST00000478563 HYDINQ4G0P3 5121 aa1.14□□□□□ -2.23
CDK13-204ENST00000478563 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
CDK13-204ENST00000478563 DMDP11532 3685 aa1.14□□□□□ -2.23
CDK13-204ENST00000478563 FLNAP21333 2647 aaKnown RBP1.14□□□□□ -2.23
CDK13-204ENST00000478563 I3L2K1 104 aa1.14□□□□□ -2.23
CDK13-204ENST00000478563 ITPR1Q14643 2758 aa1.14□□□□□ -2.23
CDK13-204ENST00000478563 SPTBN2O15020 2390 aa1.14□□□□□ -2.23
CDK13-204ENST00000478563 EP300Q09472 2414 aaPredicted RBP1.14□□□□□ -2.23
CDK13-204ENST00000478563 TOGARAM1Q9Y4F4 1720 aa1.13□□□□□ -2.23
CDK13-204ENST00000478563 CSMD1Q96PZ7 3565 aa1.13□□□□□ -2.23
CDK13-204ENST00000478563 RPS27LQ71UM5 84 aaKnown RBP1.13□□□□□ -2.23
CDK13-204ENST00000478563 APCP25054 2843 aa1.13□□□□□ -2.23
CDK13-204ENST00000478563 CEP295Q9C0D2 2601 aa1.13□□□□□ -2.23
CDK13-204ENST00000478563 MTORP42345 2549 aa1.13□□□□□ -2.23
CDK13-204ENST00000478563 UTP20O75691 2785 aaKnown RBP1.13□□□□□ -2.23
CDK13-204ENST00000478563 CELSR2Q9HCU4 2923 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms