RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	DDX60	Q8IY21	1712 aa	Known RBP	0.41	□□□□□ -2.34
TARDBP-208	ENST00000477447	IGLV5-48	A0A075B6I7	105 aa		0.41	□□□□□ -2.34
TARDBP-208	ENST00000477447	WT1-AS	Q06250	92 aa		0.41	□□□□□ -2.34
TARDBP-208	ENST00000477447	ZNF462	Q96JM2	2506 aa		0.41	□□□□□ -2.34
TARDBP-208	ENST00000477447	BPTF	Q12830	3046 aa		0.4	□□□□□ -2.34
TARDBP-208	ENST00000477447	CHD9	Q3L8U1	2897 aa		0.4	□□□□□ -2.34
TARDBP-208	ENST00000477447	CAD	P27708	2225 aa		0.4	□□□□□ -2.35
TARDBP-208	ENST00000477447	CACNA1C	Q13936	2221 aa		0.4	□□□□□ -2.35
TARDBP-208	ENST00000477447	MMP24-AS1	A0A0U1RRL7	71 aa		0.4	□□□□□ -2.35
TARDBP-208	ENST00000477447	KRTAP21-1	Q3LI58	79 aa		0.4	□□□□□ -2.35
TARDBP-208	ENST00000477447	WFDC10B	Q8IUB3	73 aa		0.4	□□□□□ -2.35
TARDBP-208	ENST00000477447		S4R3F8	94 aa		0.4	□□□□□ -2.35
TARDBP-208	ENST00000477447	TNC	P24821	2201 aa		0.4	□□□□□ -2.35
TARDBP-208	ENST00000477447	PRRC2C	Q9Y520	2896 aa	Known RBP	0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	MYCBP2	O75592	4640 aa		0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	BDP1	A6H8Y1	2624 aa		0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	HECTD1	Q9ULT8	2610 aa		0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	POLR2K	P53803	58 aa	Known RBP	0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	KAAG1	Q9UBP8	84 aa		0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	GOLGA4	Q13439	2230 aa	Known RBP	0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	CNOT1	A5YKK6	2376 aa	Known RBP	0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	TENM4	Q6N022	2769 aa		0.39	□□□□□ -2.35
TARDBP-208	ENST00000477447	KNTC1	P50748	2209 aa		0.38	□□□□□ -2.35
TARDBP-208	ENST00000477447	ZNF292	O60281	2723 aa		0.38	□□□□□ -2.35
TARDBP-208	ENST00000477447	PLCE1	Q9P212	2302 aa		0.38	□□□□□ -2.35
TARDBP-208	ENST00000477447	GPR98	Q8WXG9	6306 aa		0.38	□□□□□ -2.35
TARDBP-208	ENST00000477447	CLTCL1	P53675	1640 aa		0.38	□□□□□ -2.35
TARDBP-208	ENST00000477447	TTC28	Q96AY4	2481 aa		0.38	□□□□□ -2.35
TARDBP-208	ENST00000477447	NAV3	Q8IVL0	2385 aa		0.38	□□□□□ -2.35
TARDBP-208	ENST00000477447	TPR	P12270	2363 aa	Known RBP	0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447		H3BUA1	57 aa		0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	DEFB131A	P59861	70 aa		0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	RPL39	P62891	51 aa	Known RBP	0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	DEFB106A	Q8N104	65 aa		0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	CHD6	Q8TD26	2715 aa		0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	TNXB	P22105	4242 aa		0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	GVINP1	Q7Z2Y8	2422 aa		0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	IGF2R	P11717	2491 aa		0.37	□□□□□ -2.35
TARDBP-208	ENST00000477447	ATR	Q13535	2644 aa		0.36	□□□□□ -2.35
TARDBP-208	ENST00000477447	OTOG	Q6ZRI0	2925 aa		0.36	□□□□□ -2.35
TARDBP-208	ENST00000477447	PRLH	P81277	87 aa		0.36	□□□□□ -2.35
TARDBP-208	ENST00000477447	RPL39L	Q96EH5	51 aa	Known RBP	0.36	□□□□□ -2.35
TARDBP-208	ENST00000477447	ARHGAP5-AS1	Q96IT6	56 aa		0.36	□□□□□ -2.35
TARDBP-208	ENST00000477447	SPTBN2	O15020	2390 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	CACNA1H	O95180	2353 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	GCC2	Q8IWJ2	1684 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	KRTAP2-3	P0C7H8	128 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	DEFB109B	Q30KR1	87 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	CLPSL2	Q6UWE3	100 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	SMR3A	Q99954	134 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	KRTAP2-4	Q9BYR9	128 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	KRTAP2-1	Q9BYU5	128 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	C2CD3	Q4AC94	2353 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	URB1	O60287	2271 aa	Known RBP	0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	ABCA12	Q86UK0	2595 aa		0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	SYNE1	Q8NF91	8797 aa	Known RBP	0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	PTPRZ1	P23471	2315 aa	Predicted RBP	0.35	□□□□□ -2.35
TARDBP-208	ENST00000477447	DNAH11	Q96DT5	4516 aa		0.34	□□□□□ -2.35
TARDBP-208	ENST00000477447	SPTBN1	Q01082	2364 aa	Known RBP	0.34	□□□□□ -2.35
TARDBP-208	ENST00000477447	AHCTF1	Q8WYP5	2266 aa		0.34	□□□□□ -2.35
TARDBP-208	ENST00000477447	WNK2	Q9Y3S1	2297 aa		0.34	□□□□□ -2.35
TARDBP-208	ENST00000477447	PHGR1	C9JFL3	82 aa		0.34	□□□□□ -2.36
TARDBP-208	ENST00000477447	PRKDC	P78527	4128 aa	Known RBP	0.34	□□□□□ -2.36
TARDBP-208	ENST00000477447	LINC01590	Q5TEZ4	76 aa		0.34	□□□□□ -2.36
TARDBP-208	ENST00000477447	ABCA2	Q9BZC7	2435 aa		0.34	□□□□□ -2.36
TARDBP-208	ENST00000477447	PCNX1	Q96RV3	2341 aa		0.33	□□□□□ -2.36
TARDBP-208	ENST00000477447		A8MTW9	85 aa		0.33	□□□□□ -2.36
TARDBP-208	ENST00000477447	LEAP2	Q969E1	77 aa		0.33	□□□□□ -2.36
TARDBP-208	ENST00000477447	F8	P00451	2351 aa		0.33	□□□□□ -2.36
TARDBP-208	ENST00000477447	FAT2	Q9NYQ8	4349 aa		0.33	□□□□□ -2.36
TARDBP-208	ENST00000477447	VPS13B	Q7Z7G8	4022 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	TNRC18	O15417	2968 aa	Predicted RBP	0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	CRYBG3	Q68DQ2	2970 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	MUC5AC	P98088	5654 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	VWF	P04275	2813 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	APC	P25054	2843 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	MDN1	Q9NU22	5596 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447		M0QY20	66 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	TTTY10	Q9BZA0	68 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	MAP1B	P46821	2468 aa	Known RBP	0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447		A0A0C4DFX4	3053 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	PTPRQ	Q9UMZ3	2332 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	PDZD2	O15018	2839 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	CREBBP	Q92793	2442 aa		0.32	□□□□□ -2.36
TARDBP-208	ENST00000477447	KMT2A	Q03164	3969 aa		0.31	□□□□□ -2.36
TARDBP-208	ENST00000477447	NOP10	Q9NPE3	64 aa	Known RBP	0.31	□□□□□ -2.36
TARDBP-208	ENST00000477447	SETX	Q7Z333	2677 aa	Known RBP	0.31	□□□□□ -2.36
TARDBP-208	ENST00000477447	UBR5	O95071	2799 aa	Predicted RBP	0.31	□□□□□ -2.36
TARDBP-208	ENST00000477447	SETD2	Q9BYW2	2564 aa	Predicted RBP	0.31	□□□□□ -2.36
TARDBP-208	ENST00000477447	LAMA5	O15230	3695 aa		0.31	□□□□□ -2.36
TARDBP-208	ENST00000477447	NSD1	Q96L73	2696 aa	Predicted RBP	0.31	□□□□□ -2.36
TARDBP-208	ENST00000477447	FLNC	Q14315	2725 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	USF3	Q68DE3	2245 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	PKHD1L1	Q86WI1	4243 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447		M0R2T5	61 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	SPINK1	P00995	79 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	PRM1	P04553	51 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	PRCD	Q00LT1	54 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	DEFB135	Q30KP9	77 aa		0.3	□□□□□ -2.36

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