RNA–Protein interactions for RNA: ENST00000476650.2

ALMS1-203, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 239 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-203ENST00000476650 PKD1L1Q8TDX9 2849 aa0.35□□□□□ -2.35
ALMS1-203ENST00000476650 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
ALMS1-203ENST00000476650 KRTAP21-1Q3LI58 79 aa0.35□□□□□ -2.35
ALMS1-203ENST00000476650 DEFB106AQ8N104 65 aa0.35□□□□□ -2.35
ALMS1-203ENST00000476650 ATRQ13535 2644 aa0.35□□□□□ -2.35
ALMS1-203ENST00000476650 LY75O60449 1722 aa0.34□□□□□ -2.36
ALMS1-203ENST00000476650 KNL1Q8NG31 2342 aa0.34□□□□□ -2.36
ALMS1-203ENST00000476650 ANKRD36CQ5JPF3 1778 aa0.34□□□□□ -2.36
ALMS1-203ENST00000476650 USP24Q9UPU5 2620 aa0.34□□□□□ -2.36
ALMS1-203ENST00000476650 WNK2Q9Y3S1 2297 aa0.33□□□□□ -2.36
ALMS1-203ENST00000476650 PRLHP81277 87 aa0.33□□□□□ -2.36
ALMS1-203ENST00000476650 TIMM8BQ9Y5J9 83 aaPredicted RBP0.33□□□□□ -2.36
ALMS1-203ENST00000476650 CELSR1Q9NYQ6 3014 aa0.33□□□□□ -2.36
ALMS1-203ENST00000476650 CROCC2H7BZ55 1655 aa0.33□□□□□ -2.36
ALMS1-203ENST00000476650 KIF1AQ12756 1690 aa0.33□□□□□ -2.36
ALMS1-203ENST00000476650 BPTFQ12830 3046 aa0.32□□□□□ -2.36
ALMS1-203ENST00000476650 NAV2Q8IVL1 2488 aa0.32□□□□□ -2.36
ALMS1-203ENST00000476650 PREX2Q70Z35 1606 aa0.32□□□□□ -2.36
ALMS1-203ENST00000476650 ABCA2Q9BZC7 2435 aa0.32□□□□□ -2.36
ALMS1-203ENST00000476650 IGIPA6NJ69 53 aa0.32□□□□□ -2.36
ALMS1-203ENST00000476650 RPS27P42677 84 aaKnown RBP0.32□□□□□ -2.36
ALMS1-203ENST00000476650 RPS27LQ71UM5 84 aaKnown RBP0.32□□□□□ -2.36
ALMS1-203ENST00000476650 BSNQ9UPA5 3926 aa0.32□□□□□ -2.36
ALMS1-203ENST00000476650 WT1-ASQ06250 92 aa0.31□□□□□ -2.36
ALMS1-203ENST00000476650 LINC00308Q8TCZ7 52 aa0.31□□□□□ -2.36
ALMS1-203ENST00000476650 TMEM167BQ9NRX6 74 aa0.31□□□□□ -2.36
ALMS1-203ENST00000476650 S4R3F8 94 aa0.31□□□□□ -2.36
ALMS1-203ENST00000476650 UBR5O95071 2799 aaPredicted RBP0.31□□□□□ -2.36
ALMS1-203ENST00000476650 TNXBP22105 4242 aa0.31□□□□□ -2.36
ALMS1-203ENST00000476650 AKAP13Q12802 2813 aa0.31□□□□□ -2.36
ALMS1-203ENST00000476650 MUC5BQ9HC84 5762 aaPredicted RBP0.31□□□□□ -2.36
ALMS1-203ENST00000476650 DSPP15924 2871 aaKnown RBP0.31□□□□□ -2.36
ALMS1-203ENST00000476650 PDE4DIPQ5VU43 2346 aa0.3□□□□□ -2.36
ALMS1-203ENST00000476650 EFCAB6Q5THR3 1501 aa0.3□□□□□ -2.36
ALMS1-203ENST00000476650 ABRACLQ9P1F3 81 aa0.3□□□□□ -2.36
ALMS1-203ENST00000476650 H0YGX0 51 aa0.29□□□□□ -2.36
ALMS1-203ENST00000476650 PLNP26678 52 aa0.29□□□□□ -2.36
ALMS1-203ENST00000476650 CDC42BPAQ5VT25 1732 aa0.29□□□□□ -2.36
ALMS1-203ENST00000476650 TOGARAM1Q9Y4F4 1720 aa0.29□□□□□ -2.36
ALMS1-203ENST00000476650 SYCP2Q9BX26 1530 aa0.28□□□□□ -2.36
ALMS1-203ENST00000476650 SPTA1P02549 2419 aa0.28□□□□□ -2.36
ALMS1-203ENST00000476650 H3BNG1 76 aa0.28□□□□□ -2.36
ALMS1-203ENST00000476650 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
ALMS1-203ENST00000476650 PRRC2CQ9Y520 2896 aaKnown RBP0.28□□□□□ -2.36
ALMS1-203ENST00000476650 NCOR2Q9Y618 2525 aa0.28□□□□□ -2.36
ALMS1-203ENST00000476650 CLASP1Q7Z460 1538 aa0.28□□□□□ -2.37
ALMS1-203ENST00000476650 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
ALMS1-203ENST00000476650 KAAG1Q9UBP8 84 aa0.27□□□□□ -2.37
ALMS1-203ENST00000476650 AGLP35573 1532 aa0.27□□□□□ -2.37
ALMS1-203ENST00000476650 A0A1B0GUL6 1792 aa0.27□□□□□ -2.37
ALMS1-203ENST00000476650 TNRC18O15417 2968 aaPredicted RBP0.27□□□□□ -2.37
ALMS1-203ENST00000476650 FAT2Q9NYQ8 4349 aa0.27□□□□□ -2.37
ALMS1-203ENST00000476650 PTPN13Q12923 2485 aa0.26□□□□□ -2.37
ALMS1-203ENST00000476650 MAST4O15021 2626 aa0.26□□□□□ -2.37
ALMS1-203ENST00000476650 SMIM27A0A1W2PRY6 76 aa0.26□□□□□ -2.37
ALMS1-203ENST00000476650 SPRR2DP22532 72 aa0.26□□□□□ -2.37
ALMS1-203ENST00000476650 WFDC10BQ8IUB3 73 aa0.26□□□□□ -2.37
ALMS1-203ENST00000476650 FANCD2Q9BXW9 1451 aa0.26□□□□□ -2.37
ALMS1-203ENST00000476650 MAST1Q9Y2H9 1570 aa0.26□□□□□ -2.37
ALMS1-203ENST00000476650 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
ALMS1-203ENST00000476650 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
ALMS1-203ENST00000476650 ALMS1Q8TCU4 4167 aa0.25□□□□□ -2.37
ALMS1-203ENST00000476650 KMT2AQ03164 3969 aa0.25□□□□□ -2.37
ALMS1-203ENST00000476650 H3BUA1 57 aa0.25□□□□□ -2.37
ALMS1-203ENST00000476650 TFF3Q07654 80 aa0.25□□□□□ -2.37
ALMS1-203ENST00000476650 CMC2Q9NRP2 79 aa0.25□□□□□ -2.37
ALMS1-203ENST00000476650 SETXQ7Z333 2677 aaKnown RBP0.25□□□□□ -2.37
ALMS1-203ENST00000476650 CHD8Q9HCK8 2581 aa0.25□□□□□ -2.37
ALMS1-203ENST00000476650 PRKDCP78527 4128 aaKnown RBP0.25□□□□□ -2.37
ALMS1-203ENST00000476650 MDN1Q9NU22 5596 aa0.24□□□□□ -2.37
ALMS1-203ENST00000476650 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
ALMS1-203ENST00000476650 LYSTQ99698 3801 aa0.24□□□□□ -2.37
ALMS1-203ENST00000476650 SNRPGP15A8MWD9 76 aa0.24□□□□□ -2.37
ALMS1-203ENST00000476650 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
ALMS1-203ENST00000476650 NSD1Q96L73 2696 aaPredicted RBP0.23□□□□□ -2.37
ALMS1-203ENST00000476650 EP300Q09472 2414 aaPredicted RBP0.23□□□□□ -2.37
ALMS1-203ENST00000476650 DCHS2Q6V1P9 2916 aa0.23□□□□□ -2.37
ALMS1-203ENST00000476650 IGSF10Q6WRI0 2623 aa0.23□□□□□ -2.37
ALMS1-203ENST00000476650 HIVEP3Q5T1R4 2406 aa0.23□□□□□ -2.37
ALMS1-203ENST00000476650 ADCY10Q96PN6 1610 aa0.22□□□□□ -2.37
ALMS1-203ENST00000476650 ABCC8Q09428 1581 aa0.22□□□□□ -2.37
ALMS1-203ENST00000476650 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
ALMS1-203ENST00000476650 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
ALMS1-203ENST00000476650 MAP1BP46821 2468 aaKnown RBP0.21□□□□□ -2.38
ALMS1-203ENST00000476650 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
ALMS1-203ENST00000476650 LMO7Q8WWI1 1683 aa0.21□□□□□ -2.38
ALMS1-203ENST00000476650 HECTD1Q9ULT8 2610 aa0.2□□□□□ -2.38
ALMS1-203ENST00000476650 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
ALMS1-203ENST00000476650 NOP10Q9NPE3 64 aaKnown RBP0.2□□□□□ -2.38
ALMS1-203ENST00000476650 DDX60Q8IY21 1712 aaKnown RBP0.2□□□□□ -2.38
ALMS1-203ENST00000476650 APC2O95996 2303 aa0.2□□□□□ -2.38
ALMS1-203ENST00000476650 ACANP16112 2415 aa0.19□□□□□ -2.38
ALMS1-203ENST00000476650 IGLV5-48A0A075B6I7 105 aa0.19□□□□□ -2.38
ALMS1-203ENST00000476650 SPRR2BP35325 72 aa0.19□□□□□ -2.38
ALMS1-203ENST00000476650 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
ALMS1-203ENST00000476650 PDZD2O15018 2839 aa0.19□□□□□ -2.38
ALMS1-203ENST00000476650 FLNBO75369 2602 aaKnown RBP0.19□□□□□ -2.38
ALMS1-203ENST00000476650 NRXN3Q9Y4C0 1643 aa0.19□□□□□ -2.38
ALMS1-203ENST00000476650 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
ALMS1-203ENST00000476650 PCNX1Q96RV3 2341 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms