RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 Q8N9P0 234 aaPredicted RBP8.73□□□□□ -1.01
SSPO-205ENST00000475488 Q5W150 140 aa8.72□□□□□ -1.01
SSPO-205ENST00000475488 OXTP01178 125 aa8.72□□□□□ -1.01
SSPO-205ENST00000475488 ITPR3Q14573 2671 aa8.68□□□□□ -1.02
SSPO-205ENST00000475488 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
SSPO-205ENST00000475488 FLNAP21333 2647 aaKnown RBP8.68□□□□□ -1.02
SSPO-205ENST00000475488 ROMO1P60602 79 aa8.68□□□□□ -1.02
SSPO-205ENST00000475488 H3BS24 57 aa8.67□□□□□ -1.02
SSPO-205ENST00000475488 ADM2Q7Z4H4 148 aa8.67□□□□□ -1.02
SSPO-205ENST00000475488 CFAP46Q8IYW2 2715 aa8.66□□□□□ -1.02
SSPO-205ENST00000475488 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
SSPO-205ENST00000475488 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
SSPO-205ENST00000475488 LCE6AA0A183 80 aa8.62□□□□□ -1.03
SSPO-205ENST00000475488 LAMA2P24043 3122 aaKnown RBP8.61□□□□□ -1.03
SSPO-205ENST00000475488 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
SSPO-205ENST00000475488 HELZ2Q9BYK8 2649 aaKnown RBP8.59□□□□□ -1.03
SSPO-205ENST00000475488 MKI67P46013 3256 aaKnown RBP8.59□□□□□ -1.03
SSPO-205ENST00000475488 FP248Q71RG6 208 aaPredicted RBP8.57□□□□□ -1.04
SSPO-205ENST00000475488 KRTAP10-1P60331 282 aa8.57□□□□□ -1.04
SSPO-205ENST00000475488 XIRP2A4UGR9 3374 aa8.55□□□□□ -1.04
SSPO-205ENST00000475488 CENPEQ02224 2701 aa8.52□□□□□ -1.04
SSPO-205ENST00000475488 CHD6Q8TD26 2715 aa8.52□□□□□ -1.05
SSPO-205ENST00000475488 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
SSPO-205ENST00000475488 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
SSPO-205ENST00000475488 A0A0C4DFX4 3053 aa8.5□□□□□ -1.05
SSPO-205ENST00000475488 TEX15Q9BXT5 2789 aa8.49□□□□□ -1.05
SSPO-205ENST00000475488 SPRR1AP35321 89 aa8.49□□□□□ -1.05
SSPO-205ENST00000475488 CHD7Q9P2D1 2997 aa8.48□□□□□ -1.05
SSPO-205ENST00000475488 C20orf166-AS1Q96NR2 134 aa8.47□□□□□ -1.05
SSPO-205ENST00000475488 Q5VV11 94 aa8.47□□□□□ -1.05
SSPO-205ENST00000475488 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.05
SSPO-205ENST00000475488 STAB1Q9NY15 2570 aa8.46□□□□□ -1.06
SSPO-205ENST00000475488 PRUNE2Q8WUY3 3088 aa8.43□□□□□ -1.06
SSPO-205ENST00000475488 KRTAP26-1Q6PEX3 210 aa8.43□□□□□ -1.06
SSPO-205ENST00000475488 Q6ZR54 194 aa8.43□□□□□ -1.06
SSPO-205ENST00000475488 SPRR1BP22528 89 aa8.42□□□□□ -1.06
SSPO-205ENST00000475488 LAMA3Q16787 3333 aa8.42□□□□□ -1.06
SSPO-205ENST00000475488 MGAQ8IWI9 3026 aa8.41□□□□□ -1.06
SSPO-205ENST00000475488 CELSR3Q9NYQ7 3312 aa8.41□□□□□ -1.06
SSPO-205ENST00000475488 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.07
SSPO-205ENST00000475488 Q8NDZ9 215 aa8.39□□□□□ -1.07
SSPO-205ENST00000475488 BRCA2P51587 3418 aa8.38□□□□□ -1.07
SSPO-205ENST00000475488 TRIOO75962 3097 aa8.38□□□□□ -1.07
SSPO-205ENST00000475488 NBEAL1Q6ZS30 2694 aa8.37□□□□□ -1.07
SSPO-205ENST00000475488 PANO1I0J062 215 aa8.36□□□□□ -1.07
SSPO-205ENST00000475488 FREM2Q5SZK8 3169 aa8.36□□□□□ -1.07
SSPO-205ENST00000475488 A8MUU9 505 aa8.35□□□□□ -1.07
SSPO-205ENST00000475488 RANBP2P49792 3224 aaKnown RBP8.35□□□□□ -1.07
SSPO-205ENST00000475488 TEP1Q99973 2627 aaKnown RBP8.35□□□□□ -1.07
SSPO-205ENST00000475488 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
SSPO-205ENST00000475488 Q5XG85 94 aa8.3□□□□□ -1.08
SSPO-205ENST00000475488 SETXQ7Z333 2677 aaKnown RBP8.29□□□□□ -1.08
SSPO-205ENST00000475488 UNC79Q9P2D8 2635 aa8.29□□□□□ -1.08
SSPO-205ENST00000475488 A0A087X002 238 aa8.28□□□□□ -1.08
SSPO-205ENST00000475488 VPS13AQ96RL7 3174 aa8.26□□□□□ -1.09
SSPO-205ENST00000475488 COL6A5A8TX70 2615 aa8.23□□□□□ -1.09
SSPO-205ENST00000475488 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
SSPO-205ENST00000475488 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
SSPO-205ENST00000475488 MAP1AP78559 2803 aaPredicted RBP8.22□□□□□ -1.09
SSPO-205ENST00000475488 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.09
SSPO-205ENST00000475488 TNP1P09430 55 aa8.17□□□□□ -1.1
SSPO-205ENST00000475488 FRYQ5TBA9 3013 aa8.17□□□□□ -1.1
SSPO-205ENST00000475488 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
SSPO-205ENST00000475488 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
SSPO-205ENST00000475488 HTTP42858 3142 aa8.16□□□□□ -1.1
SSPO-205ENST00000475488 CDH23Q9H251 3354 aa8.15□□□□□ -1.11
SSPO-205ENST00000475488 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
SSPO-205ENST00000475488 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
SSPO-205ENST00000475488 UNC80Q8N2C7 3258 aa8.13□□□□□ -1.11
SSPO-205ENST00000475488 REV3LO60673 3130 aa8.13□□□□□ -1.11
SSPO-205ENST00000475488 DNAH14Q0VDD8 3507 aa8.12□□□□□ -1.11
SSPO-205ENST00000475488 C10orf95Q9H7T3 257 aa8.11□□□□□ -1.11
SSPO-205ENST00000475488 A8MU10 97 aa8.11□□□□□ -1.11
SSPO-205ENST00000475488 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
SSPO-205ENST00000475488 NBEAL2Q6ZNJ1 2754 aa8.06□□□□□ -1.12
SSPO-205ENST00000475488 STAB2Q8WWQ8 2551 aa8.06□□□□□ -1.12
SSPO-205ENST00000475488 NOTCH2NLQ7Z3S9 236 aa8.06□□□□□ -1.12
SSPO-205ENST00000475488 CHD9Q3L8U1 2897 aa8.05□□□□□ -1.12
SSPO-205ENST00000475488 KMT2BQ9UMN6 2715 aaPredicted RBP8.05□□□□□ -1.12
SSPO-205ENST00000475488 ZNF292O60281 2723 aa8.04□□□□□ -1.12
SSPO-205ENST00000475488 BAHCC1Q9P281 2608 aa8.04□□□□□ -1.12
SSPO-205ENST00000475488 KRTAP4-16G5E9R7 235 aaPredicted RBP8.03□□□□□ -1.12
SSPO-205ENST00000475488 ITPR2Q14571 2701 aa8.03□□□□□ -1.12
SSPO-205ENST00000475488 DSPP15924 2871 aaKnown RBP8.03□□□□□ -1.12
SSPO-205ENST00000475488 TRANK1O15050 2925 aa8.01□□□□□ -1.13
SSPO-205ENST00000475488 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
SSPO-205ENST00000475488 KRTAP10-8P60410 259 aa8□□□□□ -1.13
SSPO-205ENST00000475488 KALRNO60229 2985 aa8□□□□□ -1.13
SSPO-205ENST00000475488 CRYBG3Q68DQ2 2970 aa7.98□□□□□ -1.13
SSPO-205ENST00000475488 COL6A3P12111 3177 aa7.96□□□□□ -1.14
SSPO-205ENST00000475488 DMXL2Q8TDJ6 3036 aa7.95□□□□□ -1.14
SSPO-205ENST00000475488 LAMA1P25391 3075 aa7.94□□□□□ -1.14
SSPO-205ENST00000475488 NDUFAF8A1L188 74 aa7.94□□□□□ -1.14
SSPO-205ENST00000475488 A0A1B0GVY2 172 aa7.92□□□□□ -1.14
SSPO-205ENST00000475488 CFAP47Q6ZTR5 3102 aa7.92□□□□□ -1.14
SSPO-205ENST00000475488 KRTAP11-1Q8IUC1 163 aa7.91□□□□□ -1.14
SSPO-205ENST00000475488 SZT2Q5T011 3432 aa7.91□□□□□ -1.14
SSPO-205ENST00000475488 VCANP13611 3396 aa7.91□□□□□ -1.14
SSPO-205ENST00000475488 SPEGQ15772 3267 aa7.89□□□□□ -1.15
SSPO-205ENST00000475488 APCP25054 2843 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms