RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
VAPB-204ENST00000475243 NBEAL1Q6ZS30 2694 aa6.88□□□□□ -1.31
VAPB-204ENST00000475243 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
VAPB-204ENST00000475243 TEP1Q99973 2627 aaKnown RBP6.87□□□□□ -1.31
VAPB-204ENST00000475243 FRYQ5TBA9 3013 aa6.87□□□□□ -1.31
VAPB-204ENST00000475243 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
VAPB-204ENST00000475243 CD164Q04900 197 aa6.85□□□□□ -1.31
VAPB-204ENST00000475243 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
VAPB-204ENST00000475243 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
VAPB-204ENST00000475243 LCA10Q71F78 164 aa6.82□□□□□ -1.32
VAPB-204ENST00000475243 UNC79Q9P2D8 2635 aa6.82□□□□□ -1.32
VAPB-204ENST00000475243 SZT2Q5T011 3432 aa6.82□□□□□ -1.32
VAPB-204ENST00000475243 CHD9Q3L8U1 2897 aa6.82□□□□□ -1.32
VAPB-204ENST00000475243 HRES1P13985 223 aa6.81□□□□□ -1.32
VAPB-204ENST00000475243 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
VAPB-204ENST00000475243 A0A1B0GU33 70 aa6.79□□□□□ -1.32
VAPB-204ENST00000475243 VCANP13611 3396 aa6.79□□□□□ -1.32
VAPB-204ENST00000475243 LAMA1P25391 3075 aa6.79□□□□□ -1.32
VAPB-204ENST00000475243 SETXQ7Z333 2677 aaKnown RBP6.78□□□□□ -1.32
VAPB-204ENST00000475243 COL6A5A8TX70 2615 aa6.78□□□□□ -1.32
VAPB-204ENST00000475243 GCN1Q92616 2671 aaKnown RBP6.78□□□□□ -1.32
VAPB-204ENST00000475243 TRANK1O15050 2925 aa6.77□□□□□ -1.33
VAPB-204ENST00000475243 COL6A3P12111 3177 aa6.76□□□□□ -1.33
VAPB-204ENST00000475243 Q8NDZ9 215 aa6.75□□□□□ -1.33
VAPB-204ENST00000475243 Q1T7F1 81 aa6.75□□□□□ -1.33
VAPB-204ENST00000475243 KALRNO60229 2985 aa6.75□□□□□ -1.33
VAPB-204ENST00000475243 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
VAPB-204ENST00000475243 NOTCH1P46531 2555 aa6.74□□□□□ -1.33
VAPB-204ENST00000475243 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
VAPB-204ENST00000475243 S4R3F8 94 aa6.73□□□□□ -1.33
VAPB-204ENST00000475243 DSPP15924 2871 aaKnown RBP6.73□□□□□ -1.33
VAPB-204ENST00000475243 NBEAL2Q6ZNJ1 2754 aa6.72□□□□□ -1.33
VAPB-204ENST00000475243 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.33
VAPB-204ENST00000475243 PLAC8Q9NZF1 115 aa6.71□□□□□ -1.33
VAPB-204ENST00000475243 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
VAPB-204ENST00000475243 CFAP47Q6ZTR5 3102 aa6.7□□□□□ -1.34
VAPB-204ENST00000475243 DMBT1Q9UGM3 2413 aaPredicted RBP6.69□□□□□ -1.34
VAPB-204ENST00000475243 SPEGQ15772 3267 aa6.68□□□□□ -1.34
VAPB-204ENST00000475243 DMXL2Q8TDJ6 3036 aa6.68□□□□□ -1.34
VAPB-204ENST00000475243 CSAG1Q6PB30 78 aa6.68□□□□□ -1.34
VAPB-204ENST00000475243 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
VAPB-204ENST00000475243 ZNF292O60281 2723 aa6.66□□□□□ -1.34
VAPB-204ENST00000475243 Q5W150 140 aa6.66□□□□□ -1.34
VAPB-204ENST00000475243 SPINK7P58062 85 aa6.65□□□□□ -1.34
VAPB-204ENST00000475243 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
VAPB-204ENST00000475243 Q75L30 129 aa6.65□□□□□ -1.35
VAPB-204ENST00000475243 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
VAPB-204ENST00000475243 SPRR1AP35321 89 aa6.63□□□□□ -1.35
VAPB-204ENST00000475243 Q5VSD8 79 aa6.63□□□□□ -1.35
VAPB-204ENST00000475243 WIPF1O43516 503 aa6.63□□□□□ -1.35
VAPB-204ENST00000475243 R4GN34 69 aa6.63□□□□□ -1.35
VAPB-204ENST00000475243 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
VAPB-204ENST00000475243 CRYBG3Q68DQ2 2970 aa6.63□□□□□ -1.35
VAPB-204ENST00000475243 ITPR2Q14571 2701 aa6.62□□□□□ -1.35
VAPB-204ENST00000475243 LRBAP50851 2863 aa6.62□□□□□ -1.35
VAPB-204ENST00000475243 BOD1L1Q8NFC6 3051 aa6.61□□□□□ -1.35
VAPB-204ENST00000475243 PRAC1Q96KF2 57 aa6.61□□□□□ -1.35
VAPB-204ENST00000475243 FRYLO94915 3013 aa6.61□□□□□ -1.35
VAPB-204ENST00000475243 LINC00472Q9H8W2 130 aa6.61□□□□□ -1.35
VAPB-204ENST00000475243 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
VAPB-204ENST00000475243 KRTAP10-1P60331 282 aa6.6□□□□□ -1.35
VAPB-204ENST00000475243 STAB2Q8WWQ8 2551 aa6.59□□□□□ -1.35
VAPB-204ENST00000475243 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
VAPB-204ENST00000475243 ASH1LQ9NR48 2969 aaKnown RBP6.58□□□□□ -1.36
VAPB-204ENST00000475243 BAHCC1Q9P281 2608 aa6.56□□□□□ -1.36
VAPB-204ENST00000475243 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
VAPB-204ENST00000475243 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
VAPB-204ENST00000475243 APCP25054 2843 aa6.54□□□□□ -1.36
VAPB-204ENST00000475243 Q5VV11 94 aa6.54□□□□□ -1.36
VAPB-204ENST00000475243 Q5XG85 94 aa6.54□□□□□ -1.36
VAPB-204ENST00000475243 USP34Q70CQ2 3546 aa6.53□□□□□ -1.36
VAPB-204ENST00000475243 UBR5O95071 2799 aaPredicted RBP6.53□□□□□ -1.36
VAPB-204ENST00000475243 KRTAP26-1Q6PEX3 210 aa6.53□□□□□ -1.36
VAPB-204ENST00000475243 SPRR1BP22528 89 aa6.52□□□□□ -1.37
VAPB-204ENST00000475243 TACC2O95359 2948 aa6.51□□□□□ -1.37
VAPB-204ENST00000475243 PANO1I0J062 215 aa6.5□□□□□ -1.37
VAPB-204ENST00000475243 M0QZ58 72 aa6.5□□□□□ -1.37
VAPB-204ENST00000475243 NBEAQ8NFP9 2946 aa6.5□□□□□ -1.37
VAPB-204ENST00000475243 ADGRG4Q8IZF6 3080 aa6.5□□□□□ -1.37
VAPB-204ENST00000475243 LCE6AA0A183 80 aa6.49□□□□□ -1.37
VAPB-204ENST00000475243 COL12A1Q99715 3063 aa6.47□□□□□ -1.37
VAPB-204ENST00000475243 EYSQ5T1H1 3165 aa6.47□□□□□ -1.37
VAPB-204ENST00000475243 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.38
VAPB-204ENST00000475243 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
VAPB-204ENST00000475243 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
VAPB-204ENST00000475243 A0A087X002 238 aa6.45□□□□□ -1.38
VAPB-204ENST00000475243 SPATA8Q6RVD6 105 aa6.45□□□□□ -1.38
VAPB-204ENST00000475243 NSD1Q96L73 2696 aaPredicted RBP6.45□□□□□ -1.38
VAPB-204ENST00000475243 SPTBN5Q9NRC6 3674 aaKnown RBP6.45□□□□□ -1.38
VAPB-204ENST00000475243 ATMQ13315 3056 aa6.45□□□□□ -1.38
VAPB-204ENST00000475243 UTP20O75691 2785 aaKnown RBP6.44□□□□□ -1.38
VAPB-204ENST00000475243 KMT2BQ9UMN6 2715 aaPredicted RBP6.44□□□□□ -1.38
VAPB-204ENST00000475243 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
VAPB-204ENST00000475243 ROMO1P60602 79 aa6.43□□□□□ -1.38
VAPB-204ENST00000475243 Q6ZR54 194 aa6.43□□□□□ -1.38
VAPB-204ENST00000475243 ITPR1Q14643 2758 aa6.42□□□□□ -1.38
VAPB-204ENST00000475243 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
VAPB-204ENST00000475243 MYO15AQ9UKN7 3530 aa6.4□□□□□ -1.39
VAPB-204ENST00000475243 H3BS24 57 aa6.39□□□□□ -1.39
VAPB-204ENST00000475243 OXTP01178 125 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms