RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 HSD52Q0P140 79 aa9.24□□□□□ -0.93
SRM-204ENST00000475189 RPS29P62273 56 aaKnown RBP9.23□□□□□ -0.93
SRM-204ENST00000475189 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
SRM-204ENST00000475189 Q6ZQY7 126 aa9.22□□□□□ -0.93
SRM-204ENST00000475189 PRO1854Q9UHT4 67 aa9.22□□□□□ -0.93
SRM-204ENST00000475189 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
SRM-204ENST00000475189 H0YGX0 51 aa9.18□□□□□ -0.94
SRM-204ENST00000475189 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.18□□□□□ -0.94
SRM-204ENST00000475189 PRO1933Q9H354 126 aa9.18□□□□□ -0.94
SRM-204ENST00000475189 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
SRM-204ENST00000475189 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
SRM-204ENST00000475189 FAM218AQ96MZ4 157 aa9.16□□□□□ -0.94
SRM-204ENST00000475189 K7ERJ3 54 aa9.15□□□□□ -0.94
SRM-204ENST00000475189 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
SRM-204ENST00000475189 SMIM6P0DI80 62 aa9.14□□□□□ -0.95
SRM-204ENST00000475189 CD164Q04900 197 aa9.14□□□□□ -0.95
SRM-204ENST00000475189 TPRXLQ17RH7 258 aa9.14□□□□□ -0.95
SRM-204ENST00000475189 TRIAP1O43715 76 aa9.13□□□□□ -0.95
SRM-204ENST00000475189 PPDPFLQ8WWR9 84 aa9.13□□□□□ -0.95
SRM-204ENST00000475189 F8WEM9 126 aa9.12□□□□□ -0.95
SRM-204ENST00000475189 SNCGO76070 127 aa9.11□□□□□ -0.95
SRM-204ENST00000475189 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
SRM-204ENST00000475189 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
SRM-204ENST00000475189 A0A1B0GX51 115 aa9.1□□□□□ -0.95
SRM-204ENST00000475189 OCIAD2Q56VL3 154 aa9.1□□□□□ -0.95
SRM-204ENST00000475189 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
SRM-204ENST00000475189 CLEC2BQ92478 149 aa9.08□□□□□ -0.96
SRM-204ENST00000475189 PSMB2P49721 201 aa9.07□□□□□ -0.96
SRM-204ENST00000475189 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
SRM-204ENST00000475189 Q5XG85 94 aa9.06□□□□□ -0.96
SRM-204ENST00000475189 Q6JHZ5 121 aa9.06□□□□□ -0.96
SRM-204ENST00000475189 IGFL1Q6UW32 110 aa9.05□□□□□ -0.96
SRM-204ENST00000475189 COX6CP09669 75 aa9.04□□□□□ -0.96
SRM-204ENST00000475189 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
SRM-204ENST00000475189 H3BUT2 72 aa9.02□□□□□ -0.97
SRM-204ENST00000475189 H3BS24 57 aa9.01□□□□□ -0.97
SRM-204ENST00000475189 M0R143 59 aa9.01□□□□□ -0.97
SRM-204ENST00000475189 NDUFV3P56181 108 aaKnown RBP9.01□□□□□ -0.97
SRM-204ENST00000475189 TSTD3H0UI37 97 aa8.99□□□□□ -0.97
SRM-204ENST00000475189 DNAL4O96015 105 aa8.99□□□□□ -0.97
SRM-204ENST00000475189 FABP2P12104 132 aa8.99□□□□□ -0.97
SRM-204ENST00000475189 C1orf195Q5TG92 126 aa8.99□□□□□ -0.97
SRM-204ENST00000475189 TRBV7-7A0A0K0K1E9 115 aa8.98□□□□□ -0.97
SRM-204ENST00000475189 TCL1BO95988 128 aa8.97□□□□□ -0.97
SRM-204ENST00000475189 SCGB1C2P0DMR2 95 aa8.97□□□□□ -0.97
SRM-204ENST00000475189 ORMDL1Q9P0S3 153 aa8.97□□□□□ -0.97
SRM-204ENST00000475189 H3BMG7 143 aa8.96□□□□□ -0.98
SRM-204ENST00000475189 H3BQ85 93 aa8.94□□□□□ -0.98
SRM-204ENST00000475189 LST1O00453 97 aa8.94□□□□□ -0.98
SRM-204ENST00000475189 TRACP01848 142 aa8.94□□□□□ -0.98
SRM-204ENST00000475189 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
SRM-204ENST00000475189 MUC2Q02817 5179 aa8.94□□□□□ -0.98
SRM-204ENST00000475189 Q6Q795 121 aa8.93□□□□□ -0.98
SRM-204ENST00000475189 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
SRM-204ENST00000475189 NAA38Q9BRA0 125 aaKnown RBP8.92□□□□□ -0.98
SRM-204ENST00000475189 XP32Q5T750 250 aa8.91□□□□□ -0.98
SRM-204ENST00000475189 TEN1Q86WV5 123 aa8.91□□□□□ -0.98
SRM-204ENST00000475189 C9orf92A6NGG3 77 aa8.9□□□□□ -0.98
SRM-204ENST00000475189 UBE2V1Q13404 147 aa8.88□□□□□ -0.99
SRM-204ENST00000475189 BATFQ16520 125 aa8.88□□□□□ -0.99
SRM-204ENST00000475189 A0A1B0GV72 72 aa8.87□□□□□ -0.99
SRM-204ENST00000475189 A0A1W2PNM2 257 aa8.87□□□□□ -0.99
SRM-204ENST00000475189 ANKRD29Q8N6D5 301 aa8.86□□□□□ -0.99
SRM-204ENST00000475189 A0A087WSZ3 146 aa8.84□□□□□ -0.99
SRM-204ENST00000475189 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
SRM-204ENST00000475189 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
SRM-204ENST00000475189 ATXN8Q156A1 80 aa8.84□□□□□ -0.99
SRM-204ENST00000475189 SS18L2Q9UHA2 77 aa8.84□□□□□ -0.99
SRM-204ENST00000475189 PCP4L1A6NKN8 68 aa8.81□□□□□ -1
SRM-204ENST00000475189 TRBV7-4A0A0J9YYF1 115 aa8.8□□□□□ -1
SRM-204ENST00000475189 RBM3P98179 157 aaKnown RBP8.79□□□□□ -1
SRM-204ENST00000475189 LYRM7Q5U5X0 104 aa8.79□□□□□ -1
SRM-204ENST00000475189 TAX1BP3O14907 124 aa8.78□□□□□ -1
SRM-204ENST00000475189 CCKP06307 115 aa8.78□□□□□ -1
SRM-204ENST00000475189 Q96NJ1 140 aa8.78□□□□□ -1
SRM-204ENST00000475189 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
SRM-204ENST00000475189 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
SRM-204ENST00000475189 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
SRM-204ENST00000475189 A0A0U1RQV1 116 aa8.75□□□□□ -1.01
SRM-204ENST00000475189 DSCR8Q96T75 97 aa8.75□□□□□ -1.01
SRM-204ENST00000475189 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
SRM-204ENST00000475189 FAT4Q6V0I7 4981 aa8.73□□□□□ -1.01
SRM-204ENST00000475189 A0A1W2PPM0 123 aa8.72□□□□□ -1.01
SRM-204ENST00000475189 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
SRM-204ENST00000475189 VPS25Q9BRG1 176 aa8.72□□□□□ -1.01
SRM-204ENST00000475189 C9JAW5 83 aa8.71□□□□□ -1.02
SRM-204ENST00000475189 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.02
SRM-204ENST00000475189 JMJD7-PLA2G4BH0Y9G9 81 aa8.7□□□□□ -1.02
SRM-204ENST00000475189 LINC00472Q9H8W2 130 aa8.68□□□□□ -1.02
SRM-204ENST00000475189 SIGMAR1Q99720 223 aa8.67□□□□□ -1.02
SRM-204ENST00000475189 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
SRM-204ENST00000475189 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
SRM-204ENST00000475189 Q6ZQT0 140 aa8.66□□□□□ -1.02
SRM-204ENST00000475189 KRTAP9-2Q9BYQ4 174 aa8.66□□□□□ -1.02
SRM-204ENST00000475189 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.02
SRM-204ENST00000475189 LCE2AQ5TA79 106 aaPredicted RBP8.65□□□□□ -1.02
SRM-204ENST00000475189 H3BT86 120 aa8.63□□□□□ -1.03
SRM-204ENST00000475189 PDE6GP18545 87 aa8.63□□□□□ -1.03
SRM-204ENST00000475189 COL5A1-AS1Q5SY13 56 aa8.63□□□□□ -1.03
SRM-204ENST00000475189 Q75L30 129 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 204.5 ms