RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TIAM2Q8IVF5 1701 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 S100PP25815 95 aa-1.24□□□□□ -2.61
ECHDC1-213ENST00000474240 DNAH5Q8TE73 4624 aa-1.24□□□□□ -2.61
ECHDC1-213ENST00000474240 DNAH7Q8WXX0 4024 aa-1.24□□□□□ -2.61
ECHDC1-213ENST00000474240 MYO9AB2RTY4 2548 aa-1.25□□□□□ -2.61
ECHDC1-213ENST00000474240 IQCF6A8MYZ5 107 aa-1.25□□□□□ -2.61
ECHDC1-213ENST00000474240 MYH4Q9Y623 1939 aa-1.26□□□□□ -2.61
ECHDC1-213ENST00000474240 RELNP78509 3460 aa-1.26□□□□□ -2.61
ECHDC1-213ENST00000474240 C3orf79P0CE67 100 aa-1.26□□□□□ -2.61
ECHDC1-213ENST00000474240 PEA15Q15121 130 aa-1.26□□□□□ -2.61
ECHDC1-213ENST00000474240 DNAH9Q9NYC9 4486 aa-1.27□□□□□ -2.61
ECHDC1-213ENST00000474240 MT1BP07438 61 aa-1.27□□□□□ -2.61
ECHDC1-213ENST00000474240 ATP10BO94823 1461 aa-1.27□□□□□ -2.61
ECHDC1-213ENST00000474240 SMG1Q96Q15 3661 aaKnown RBP-1.27□□□□□ -2.61
ECHDC1-213ENST00000474240 TLN1Q9Y490 2541 aaKnown RBP-1.28□□□□□ -2.61
ECHDC1-213ENST00000474240 CNTLNQ9NXG0 1405 aa-1.28□□□□□ -2.61
ECHDC1-213ENST00000474240 HMGN2P05204 90 aaKnown RBP-1.28□□□□□ -2.61
ECHDC1-213ENST00000474240 PRO3102Q9H379 93 aa-1.28□□□□□ -2.61
ECHDC1-213ENST00000474240 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.29□□□□□ -2.62
ECHDC1-213ENST00000474240 DNAH11Q96DT5 4516 aa-1.29□□□□□ -2.62
ECHDC1-213ENST00000474240 SUPT6HQ7KZ85 1726 aaKnown RBP-1.29□□□□□ -2.62
ECHDC1-213ENST00000474240 ADGRG4Q8IZF6 3080 aa-1.29□□□□□ -2.62
ECHDC1-213ENST00000474240 DMXL1Q9Y485 3027 aa-1.29□□□□□ -2.62
ECHDC1-213ENST00000474240 DNAH17Q9UFH2 4485 aa-1.3□□□□□ -2.62
ECHDC1-213ENST00000474240 ATP7BP35670 1465 aa-1.3□□□□□ -2.62
ECHDC1-213ENST00000474240 BPTFQ12830 3046 aa-1.3□□□□□ -2.62
ECHDC1-213ENST00000474240 ACBD7Q8N6N7 88 aa-1.3□□□□□ -2.62
ECHDC1-213ENST00000474240 WFDC9Q8NEX5 89 aa-1.3□□□□□ -2.62
ECHDC1-213ENST00000474240 ATMQ13315 3056 aa-1.3□□□□□ -2.62
ECHDC1-213ENST00000474240 ACACBO00763 2458 aa-1.3□□□□□ -2.62
ECHDC1-213ENST00000474240 ZFHX4Q86UP3 3567 aa-1.31□□□□□ -2.62
ECHDC1-213ENST00000474240 TLN2Q9Y4G6 2542 aa-1.32□□□□□ -2.62
ECHDC1-213ENST00000474240 SPENQ96T58 3664 aaKnown RBP-1.32□□□□□ -2.62
ECHDC1-213ENST00000474240 CENPEQ02224 2701 aa-1.32□□□□□ -2.62
ECHDC1-213ENST00000474240 GYPAP02724 150 aa-1.32□□□□□ -2.62
ECHDC1-213ENST00000474240 MT1HP80294 61 aa-1.32□□□□□ -2.62
ECHDC1-213ENST00000474240 RGPD3A6NKT7 1758 aaPredicted RBP-1.32□□□□□ -2.62
ECHDC1-213ENST00000474240 RGPD4Q7Z3J3 1758 aa-1.32□□□□□ -2.62
ECHDC1-213ENST00000474240 MYO3AQ8NEV4 1616 aa-1.33□□□□□ -2.62
ECHDC1-213ENST00000474240 CSMD1Q96PZ7 3565 aa-1.33□□□□□ -2.62
ECHDC1-213ENST00000474240 PLXNC1O60486 1568 aa-1.33□□□□□ -2.62
ECHDC1-213ENST00000474240 RBP2P50120 134 aa-1.33□□□□□ -2.62
ECHDC1-213ENST00000474240 LINC00158P58513 81 aa-1.33□□□□□ -2.62
ECHDC1-213ENST00000474240 C14orf144Q96I85 54 aa-1.33□□□□□ -2.62
ECHDC1-213ENST00000474240 CSMD2Q7Z408 3487 aa-1.34□□□□□ -2.62
ECHDC1-213ENST00000474240 PRUNE2Q8WUY3 3088 aa-1.34□□□□□ -2.62
ECHDC1-213ENST00000474240 NDUFB1O75438 58 aa-1.34□□□□□ -2.62
ECHDC1-213ENST00000474240 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.34□□□□□ -2.62
ECHDC1-213ENST00000474240 NESP48681 1621 aa-1.35□□□□□ -2.63
ECHDC1-213ENST00000474240 MT1XP80297 61 aa-1.35□□□□□ -2.63
ECHDC1-213ENST00000474240 NWD1Q149M9 1564 aa-1.35□□□□□ -2.63
ECHDC1-213ENST00000474240 MAGI3Q5TCQ9 1506 aa-1.35□□□□□ -2.63
ECHDC1-213ENST00000474240 USP32Q8NFA0 1604 aa-1.36□□□□□ -2.63
ECHDC1-213ENST00000474240 LTN1O94822 1766 aa-1.36□□□□□ -2.63
ECHDC1-213ENST00000474240 RGPD1P0DJD0 1748 aa-1.36□□□□□ -2.63
ECHDC1-213ENST00000474240 PLIN4Q96Q06 1357 aa-1.36□□□□□ -2.63
ECHDC1-213ENST00000474240 ATP6V1G2-DDX39BF2Z307 99 aa-1.37□□□□□ -2.63
ECHDC1-213ENST00000474240 TRRAPQ9Y4A5 3859 aa-1.37□□□□□ -2.63
ECHDC1-213ENST00000474240 FRYQ5TBA9 3013 aa-1.37□□□□□ -2.63
ECHDC1-213ENST00000474240 POLR1AO95602 1720 aaPredicted RBP-1.37□□□□□ -2.63
ECHDC1-213ENST00000474240 LRBAP50851 2863 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 MAP3K1Q13233 1512 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 TRAV21A0A0B4J279 112 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 K7EP34 96 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 M0R143 59 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 PRLHP81277 87 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 S4R3F8 94 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 DEPDC5O75140 1603 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 TRIOO75962 3097 aa-1.38□□□□□ -2.63
ECHDC1-213ENST00000474240 MT1GP13640 62 aa-1.39□□□□□ -2.63
ECHDC1-213ENST00000474240 C5orf42Q9H799 3197 aa-1.4□□□□□ -2.63
ECHDC1-213ENST00000474240 H0YAA0 97 aa-1.4□□□□□ -2.63
ECHDC1-213ENST00000474240 MT2AP02795 61 aa-1.4□□□□□ -2.63
ECHDC1-213ENST00000474240 MT1MQ8N339 61 aa-1.4□□□□□ -2.63
ECHDC1-213ENST00000474240 SCN11AQ9UI33 1791 aa-1.41□□□□□ -2.63
ECHDC1-213ENST00000474240 MYMXA0A1B0GTQ4 84 aa-1.41□□□□□ -2.64
ECHDC1-213ENST00000474240 DEFB110Q30KQ9 67 aa-1.41□□□□□ -2.64
ECHDC1-213ENST00000474240 NCMAPQ5T1S8 102 aa-1.41□□□□□ -2.64
ECHDC1-213ENST00000474240 CEP162Q5TB80 1403 aa-1.42□□□□□ -2.64
ECHDC1-213ENST00000474240 ANKRD26Q9UPS8 1709 aa-1.43□□□□□ -2.64
ECHDC1-213ENST00000474240 WIZO95785 1651 aa-1.44□□□□□ -2.64
ECHDC1-213ENST00000474240 IFI6P09912 130 aa-1.44□□□□□ -2.64
ECHDC1-213ENST00000474240 DEFB1P60022 68 aa-1.44□□□□□ -2.64
ECHDC1-213ENST00000474240 KRTAP8-1Q8IUC2 63 aa-1.44□□□□□ -2.64
ECHDC1-213ENST00000474240 SPTAN1Q13813 2472 aaKnown RBP-1.44□□□□□ -2.64
ECHDC1-213ENST00000474240 NEXMIFQ5QGS0 1516 aa-1.45□□□□□ -2.64
ECHDC1-213ENST00000474240 CRYBG3Q68DQ2 2970 aa-1.45□□□□□ -2.64
ECHDC1-213ENST00000474240 ACYP1P07311 99 aa-1.45□□□□□ -2.64
ECHDC1-213ENST00000474240 IFI27P40305 119 aaPredicted RBP-1.45□□□□□ -2.64
ECHDC1-213ENST00000474240 DNAH8Q96JB1 4490 aa-1.45□□□□□ -2.64
ECHDC1-213ENST00000474240 MGAQ8IWI9 3026 aa-1.45□□□□□ -2.64
ECHDC1-213ENST00000474240 URB2Q14146 1524 aaKnown RBP-1.45□□□□□ -2.64
ECHDC1-213ENST00000474240 AKAP12Q02952 1782 aa-1.46□□□□□ -2.64
ECHDC1-213ENST00000474240 CEBPZOSA8MTT3 80 aa-1.46□□□□□ -2.64
ECHDC1-213ENST00000474240 UBR1Q8IWV7 1749 aa-1.46□□□□□ -2.64
ECHDC1-213ENST00000474240 DNAH10Q8IVF4 4471 aa-1.46□□□□□ -2.64
ECHDC1-213ENST00000474240 PEG3Q9GZU2 1588 aa-1.47□□□□□ -2.64
ECHDC1-213ENST00000474240 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.47□□□□□ -2.64
ECHDC1-213ENST00000474240 CEP290O15078 2479 aa-1.47□□□□□ -2.64
ECHDC1-213ENST00000474240 SNRPFP62306 86 aaKnown RBP-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms