RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 LPAP08519 4548 aa10.77□□□□□ -0.68
CCDC171-206ENST00000474193 IGLV5-48A0A075B6I7 105 aa10.77□□□□□ -0.69
CCDC171-206ENST00000474193 DNAL4O96015 105 aa10.77□□□□□ -0.69
CCDC171-206ENST00000474193 OCIAD2Q56VL3 154 aa10.77□□□□□ -0.69
CCDC171-206ENST00000474193 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
CCDC171-206ENST00000474193 CLEC2BQ92478 149 aa10.77□□□□□ -0.69
CCDC171-206ENST00000474193 FAM218AQ96MZ4 157 aa10.77□□□□□ -0.69
CCDC171-206ENST00000474193 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
CCDC171-206ENST00000474193 MOBPQ13875 183 aa10.75□□□□□ -0.69
CCDC171-206ENST00000474193 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
CCDC171-206ENST00000474193 Q8N377 158 aa10.74□□□□□ -0.69
CCDC171-206ENST00000474193 PPDPFLQ8WWR9 84 aa10.74□□□□□ -0.69
CCDC171-206ENST00000474193 LINC01547P58512 204 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-206ENST00000474193 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
CCDC171-206ENST00000474193 Q8NBF4 154 aa10.73□□□□□ -0.69
CCDC171-206ENST00000474193 SNHG12Q9BXW3 62 aa10.73□□□□□ -0.69
CCDC171-206ENST00000474193 IGLV7-46A0A075B6I9 117 aa10.72□□□□□ -0.69
CCDC171-206ENST00000474193 F8WEM9 126 aa10.72□□□□□ -0.69
CCDC171-206ENST00000474193 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
CCDC171-206ENST00000474193 SPINK1P00995 79 aa10.71□□□□□ -0.69
CCDC171-206ENST00000474193 CDIP1Q9H305 208 aa10.7□□□□□ -0.7
CCDC171-206ENST00000474193 RNF213Q63HN8 5207 aa10.7□□□□□ -0.7
CCDC171-206ENST00000474193 H3BQ85 93 aa10.69□□□□□ -0.7
CCDC171-206ENST00000474193 H3BUT2 72 aa10.69□□□□□ -0.7
CCDC171-206ENST00000474193 COL5A1-AS1Q5SY13 56 aa10.69□□□□□ -0.7
CCDC171-206ENST00000474193 C9orf118A6NHY6 69 aa10.68□□□□□ -0.7
CCDC171-206ENST00000474193 LST1O00453 97 aa10.68□□□□□ -0.7
CCDC171-206ENST00000474193 TRACP01848 142 aa10.68□□□□□ -0.7
CCDC171-206ENST00000474193 SMIM29Q86T20 159 aa10.68□□□□□ -0.7
CCDC171-206ENST00000474193 ORMDL1Q9P0S3 153 aa10.68□□□□□ -0.7
CCDC171-206ENST00000474193 FABP2P12104 132 aa10.67□□□□□ -0.7
CCDC171-206ENST00000474193 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
CCDC171-206ENST00000474193 TAX1BP3O14907 124 aa10.66□□□□□ -0.7
CCDC171-206ENST00000474193 TPRXLQ17RH7 258 aa10.66□□□□□ -0.7
CCDC171-206ENST00000474193 FP248Q71RG6 208 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-206ENST00000474193 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
CCDC171-206ENST00000474193 A0A0U1RQV1 116 aa10.63□□□□□ -0.71
CCDC171-206ENST00000474193 TMEM256-PLSCR3K7ERE1 68 aa10.63□□□□□ -0.71
CCDC171-206ENST00000474193 TCL1BO95988 128 aa10.63□□□□□ -0.71
CCDC171-206ENST00000474193 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
CCDC171-206ENST00000474193 NDUFV3P56181 108 aaKnown RBP10.61□□□□□ -0.71
CCDC171-206ENST00000474193 RPS29P62273 56 aaKnown RBP10.61□□□□□ -0.71
CCDC171-206ENST00000474193 Q6JHZ5 121 aa10.6□□□□□ -0.71
CCDC171-206ENST00000474193 IGLV8-61A0A075B6I0 122 aa10.56□□□□□ -0.72
CCDC171-206ENST00000474193 H3BMG7 143 aa10.56□□□□□ -0.72
CCDC171-206ENST00000474193 BAALC-AS2P0C853 105 aa10.56□□□□□ -0.72
CCDC171-206ENST00000474193 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
CCDC171-206ENST00000474193 CD164Q04900 197 aa10.55□□□□□ -0.72
CCDC171-206ENST00000474193 UBE2V1Q13404 147 aa10.54□□□□□ -0.72
CCDC171-206ENST00000474193 LIMD2Q9BT23 127 aa10.52□□□□□ -0.73
CCDC171-206ENST00000474193 SPCS1Q9Y6A9 102 aa10.52□□□□□ -0.73
CCDC171-206ENST00000474193 IGFL1Q6UW32 110 aa10.51□□□□□ -0.73
CCDC171-206ENST00000474193 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
CCDC171-206ENST00000474193 A0A0G2JQZ4 141 aa10.5□□□□□ -0.73
CCDC171-206ENST00000474193 C9JAW5 83 aa10.5□□□□□ -0.73
CCDC171-206ENST00000474193 A0A1B0GV72 72 aa10.48□□□□□ -0.73
CCDC171-206ENST00000474193 KRTAP13-3Q3SY46 172 aa10.47□□□□□ -0.73
CCDC171-206ENST00000474193 RBM3P98179 157 aaKnown RBP10.46□□□□□ -0.73
CCDC171-206ENST00000474193 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
CCDC171-206ENST00000474193 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
CCDC171-206ENST00000474193 TEN1Q86WV5 123 aa10.43□□□□□ -0.74
CCDC171-206ENST00000474193 H3BT86 120 aa10.42□□□□□ -0.74
CCDC171-206ENST00000474193 GTF2H5Q6ZYL4 71 aa10.42□□□□□ -0.74
CCDC171-206ENST00000474193 TRBV7-7A0A0K0K1E9 115 aa10.41□□□□□ -0.74
CCDC171-206ENST00000474193 K7EP34 96 aa10.41□□□□□ -0.74
CCDC171-206ENST00000474193 SEC61BP60468 96 aaKnown RBP10.4□□□□□ -0.74
CCDC171-206ENST00000474193 Q6Q795 121 aa10.4□□□□□ -0.74
CCDC171-206ENST00000474193 Q5XG85 94 aa10.39□□□□□ -0.75
CCDC171-206ENST00000474193 MUC2Q02817 5179 aa10.38□□□□□ -0.75
CCDC171-206ENST00000474193 MTURNQ8N3F0 131 aa10.38□□□□□ -0.75
CCDC171-206ENST00000474193 SS18L2Q9UHA2 77 aa10.37□□□□□ -0.75
CCDC171-206ENST00000474193 CCKP06307 115 aa10.36□□□□□ -0.75
CCDC171-206ENST00000474193 ASB16-AS1Q495Z4 193 aa10.36□□□□□ -0.75
CCDC171-206ENST00000474193 VPS25Q9BRG1 176 aa10.36□□□□□ -0.75
CCDC171-206ENST00000474193 TRBV7-4A0A0J9YYF1 115 aa10.35□□□□□ -0.75
CCDC171-206ENST00000474193 A0A1W2PNM2 257 aa10.34□□□□□ -0.75
CCDC171-206ENST00000474193 PDE6GP18545 87 aa10.34□□□□□ -0.75
CCDC171-206ENST00000474193 MUC17Q685J3 4493 aa10.33□□□□□ -0.76
CCDC171-206ENST00000474193 A0A087WSZ3 146 aa10.32□□□□□ -0.76
CCDC171-206ENST00000474193 C21orf62-AS1Q17RA5 79 aa10.31□□□□□ -0.76
CCDC171-206ENST00000474193 LOC110117498A0A087WWA1 95 aa10.3□□□□□ -0.76
CCDC171-206ENST00000474193 C14orf132Q9NPU4 83 aa10.3□□□□□ -0.76
CCDC171-206ENST00000474193 OBSCN-AS1Q96MR7 158 aa10.29□□□□□ -0.76
CCDC171-206ENST00000474193 XP32Q5T750 250 aa10.28□□□□□ -0.76
CCDC171-206ENST00000474193 C1orf195Q5TG92 126 aa10.28□□□□□ -0.76
CCDC171-206ENST00000474193 F8W1H4 67 aa10.27□□□□□ -0.77
CCDC171-206ENST00000474193 Q6ZQT0 140 aa10.27□□□□□ -0.77
CCDC171-206ENST00000474193 PRO0461Q9UI25 63 aa10.26□□□□□ -0.77
CCDC171-206ENST00000474193 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-206ENST00000474193 A0A1B0GW54 56 aa10.23□□□□□ -0.77
CCDC171-206ENST00000474193 C9orf92A6NGG3 77 aa10.23□□□□□ -0.77
CCDC171-206ENST00000474193 A0A1B0GV90 55 aa10.16□□□□□ -0.78
CCDC171-206ENST00000474193 LCE2AQ5TA79 106 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-206ENST00000474193 FAT4Q6V0I7 4981 aa10.14□□□□□ -0.79
CCDC171-206ENST00000474193 IGKV4-1P06312 121 aa10.13□□□□□ -0.79
CCDC171-206ENST00000474193 ETDBQ3ZM63 59 aa10.13□□□□□ -0.79
CCDC171-206ENST00000474193 SIGMAR1Q99720 223 aa10.13□□□□□ -0.79
CCDC171-206ENST00000474193 PCOTHQ58A44 107 aa10.12□□□□□ -0.79
CCDC171-206ENST00000474193 Q96NJ1 140 aa10.12□□□□□ -0.79
CCDC171-206ENST00000474193 NREPQ16612 68 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms