RNA–Protein interactions for RNA: ENST00000470183.1

RPGR-205, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-205ENST00000470183 TFF3Q07654 80 aa0.63□□□□□ -2.31
RPGR-205ENST00000470183 KAAG1Q9UBP8 84 aa0.63□□□□□ -2.31
RPGR-205ENST00000470183 CACNA1HO95180 2353 aa0.63□□□□□ -2.31
RPGR-205ENST00000470183 PCNTO95613 3336 aa0.63□□□□□ -2.31
RPGR-205ENST00000470183 URB1O60287 2271 aaKnown RBP0.62□□□□□ -2.31
RPGR-205ENST00000470183 AHCTF1Q8WYP5 2266 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 LAMA3Q16787 3333 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 PIEZO2Q9H5I5 2752 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 DEFB108AA8MXU0 73 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 WFDC13Q8IUB5 93 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 TOMM5Q8N4H5 51 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 ACACAQ13085 2346 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 KNL1Q8NG31 2342 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 PTPRQQ9UMZ3 2332 aa0.62□□□□□ -2.31
RPGR-205ENST00000470183 MKI67P46013 3256 aaKnown RBP0.62□□□□□ -2.31
RPGR-205ENST00000470183 PTPRZ1P23471 2315 aaPredicted RBP0.61□□□□□ -2.31
RPGR-205ENST00000470183 H3BUA1 57 aa0.61□□□□□ -2.31
RPGR-205ENST00000470183 RPS27P42677 84 aaKnown RBP0.61□□□□□ -2.31
RPGR-205ENST00000470183 ARHGAP5-AS1Q96IT6 56 aa0.61□□□□□ -2.31
RPGR-205ENST00000470183 TTTY10Q9BZA0 68 aa0.61□□□□□ -2.31
RPGR-205ENST00000470183 TNRC18O15417 2968 aaPredicted RBP0.61□□□□□ -2.31
RPGR-205ENST00000470183 GVINP1Q7Z2Y8 2422 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 CHD7Q9P2D1 2997 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 UNC80Q8N2C7 3258 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 APC2O95996 2303 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 TRANK1O15050 2925 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 CNOT1A5YKK6 2376 aaKnown RBP0.6□□□□□ -2.31
RPGR-205ENST00000470183 PLNP26678 52 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 PRCDQ00LT1 54 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 KLK9Q2XQG4 91 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 SPINK6Q6UWN8 80 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 DEFB108BQ8NET1 73 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 TMEM167AQ8TBQ9 72 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 CEP350Q5VT06 3117 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 TTC28Q96AY4 2481 aa0.6□□□□□ -2.31
RPGR-205ENST00000470183 EP300Q09472 2414 aaPredicted RBP0.59□□□□□ -2.31
RPGR-205ENST00000470183 HIVEP3Q5T1R4 2406 aa0.59□□□□□ -2.31
RPGR-205ENST00000470183 CEP250Q9BV73 2442 aa0.59□□□□□ -2.31
RPGR-205ENST00000470183 RIF1Q5UIP0 2472 aaKnown RBP0.59□□□□□ -2.31
RPGR-205ENST00000470183 SZT2Q5T011 3432 aa0.59□□□□□ -2.31
RPGR-205ENST00000470183 CACNA1AO00555 2505 aa0.59□□□□□ -2.31
RPGR-205ENST00000470183 ZNF462Q96JM2 2506 aa0.59□□□□□ -2.31
RPGR-205ENST00000470183 H3BSH0 61 aa0.59□□□□□ -2.31
RPGR-205ENST00000470183 TMEM167BQ9NRX6 74 aa0.59□□□□□ -2.31
RPGR-205ENST00000470183 RANBP2P49792 3224 aaKnown RBP0.59□□□□□ -2.32
RPGR-205ENST00000470183 DNAH12Q6ZR08 3092 aa0.59□□□□□ -2.32
RPGR-205ENST00000470183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.32
RPGR-205ENST00000470183 PCNX1Q96RV3 2341 aa0.59□□□□□ -2.32
RPGR-205ENST00000470183 PLCE1Q9P212 2302 aa0.59□□□□□ -2.32
RPGR-205ENST00000470183 PIEZO1Q92508 2521 aa0.59□□□□□ -2.32
RPGR-205ENST00000470183 CHD9Q3L8U1 2897 aa0.59□□□□□ -2.32
RPGR-205ENST00000470183 USP34Q70CQ2 3546 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 ANK2Q01484 3957 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 H3BUX3 64 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 KRTAP2-3P0C7H8 128 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 RPL39P5Q59GN2 51 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 SMR3AQ99954 134 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 KRTAP2-4Q9BYR9 128 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 USF3Q68DE3 2245 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 MAP1BP46821 2468 aaKnown RBP0.58□□□□□ -2.32
RPGR-205ENST00000470183 ANKHD1Q8IWZ3 2542 aaKnown RBP0.58□□□□□ -2.32
RPGR-205ENST00000470183 CSMD3Q7Z407 3707 aa0.58□□□□□ -2.32
RPGR-205ENST00000470183 C5orf42Q9H799 3197 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 PRUNE2Q8WUY3 3088 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 DOPEY1Q5JWR5 2465 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 PKDREJQ9NTG1 2253 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 DOPEY2Q9Y3R5 2298 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 MUC3AQ02505 3323 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 XIRP2A4UGR9 3374 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 A8MTW9 85 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 H0YGX0 51 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 K7EIM0 57 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 PRH1P02810 166 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 IAPPP10997 89 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 WT1-ASQ06250 92 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 LEAP2Q969E1 77 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 BPTFQ12830 3046 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 ABCA2Q9BZC7 2435 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 REV3LO60673 3130 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 COL6A3P12111 3177 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 EYSQ5T1H1 3165 aa0.57□□□□□ -2.32
RPGR-205ENST00000470183 SPTBN1Q01082 2364 aaKnown RBP0.56□□□□□ -2.32
RPGR-205ENST00000470183 SPTA1P02549 2419 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 PKD1L2Q7Z442 2459 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 WNK2Q9Y3S1 2297 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 H3BNG1 76 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 RHPN1-AS1Q9BWJ2 59 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 POLQO75417 2590 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 ACACBO00763 2458 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 TNCP24821 2201 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 VCANP13611 3396 aa0.56□□□□□ -2.32
RPGR-205ENST00000470183 AKAP6Q13023 2319 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 TPRP12270 2363 aaKnown RBP0.55□□□□□ -2.32
RPGR-205ENST00000470183 DCHS1Q96JQ0 3298 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 IGF2RP11717 2491 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms