RNA–Protein interactions for RNA: ENST00000470183.1

RPGR-205, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-205ENST00000470183 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
RPGR-205ENST00000470183 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
RPGR-205ENST00000470183 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
RPGR-205ENST00000470183 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
RPGR-205ENST00000470183 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
RPGR-205ENST00000470183 FOXD1Q16676 465 aa15.35■□□□□ 0.05
RPGR-205ENST00000470183 ADRA2BP18089 450 aa14.89□□□□□ -0.03
RPGR-205ENST00000470183 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
RPGR-205ENST00000470183 PIAS4Q8N2W9 510 aaPredicted RBP14.51□□□□□ -0.09
RPGR-205ENST00000470183 MSH5O43196 834 aa14.1□□□□□ -0.15
RPGR-205ENST00000470183 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
RPGR-205ENST00000470183 KCNA4P22459 653 aa13.68□□□□□ -0.22
RPGR-205ENST00000470183 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
RPGR-205ENST00000470183 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
RPGR-205ENST00000470183 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
RPGR-205ENST00000470183 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
RPGR-205ENST00000470183 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
RPGR-205ENST00000470183 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
RPGR-205ENST00000470183 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
RPGR-205ENST00000470183 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
RPGR-205ENST00000470183 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
RPGR-205ENST00000470183 DNAJC5BQ9UF47 199 aa12.92□□□□□ -0.34
RPGR-205ENST00000470183 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
RPGR-205ENST00000470183 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
RPGR-205ENST00000470183 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
RPGR-205ENST00000470183 ZBTB22O15209 634 aa12.59□□□□□ -0.39
RPGR-205ENST00000470183 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
RPGR-205ENST00000470183 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
RPGR-205ENST00000470183 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
RPGR-205ENST00000470183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPGR-205ENST00000470183 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
RPGR-205ENST00000470183 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
RPGR-205ENST00000470183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
RPGR-205ENST00000470183 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
RPGR-205ENST00000470183 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
RPGR-205ENST00000470183 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
RPGR-205ENST00000470183 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
RPGR-205ENST00000470183 APLP2Q06481 763 aa11.97□□□□□ -0.49
RPGR-205ENST00000470183 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
RPGR-205ENST00000470183 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
RPGR-205ENST00000470183 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
RPGR-205ENST00000470183 CAPN15O75808 1086 aa11.79□□□□□ -0.52
RPGR-205ENST00000470183 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
RPGR-205ENST00000470183 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
RPGR-205ENST00000470183 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
RPGR-205ENST00000470183 POLA2Q14181 598 aa11.62□□□□□ -0.55
RPGR-205ENST00000470183 ABCB7O75027 752 aa11.58□□□□□ -0.56
RPGR-205ENST00000470183 DSG3P32926 999 aa11.56□□□□□ -0.56
RPGR-205ENST00000470183 FBLN2P98095 1184 aa11.46□□□□□ -0.57
RPGR-205ENST00000470183 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
RPGR-205ENST00000470183 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
RPGR-205ENST00000470183 FKBP8Q14318 412 aa11.42□□□□□ -0.58
RPGR-205ENST00000470183 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
RPGR-205ENST00000470183 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
RPGR-205ENST00000470183 SPDYE2BA6NHP3 402 aa11.15□□□□□ -0.62
RPGR-205ENST00000470183 SPDYE6P0CI01 402 aa11.15□□□□□ -0.62
RPGR-205ENST00000470183 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
RPGR-205ENST00000470183 ZNF692Q9BU19 519 aaPredicted RBP11.12□□□□□ -0.63
RPGR-205ENST00000470183 PROM2Q8N271 834 aa11.11□□□□□ -0.63
RPGR-205ENST00000470183 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
RPGR-205ENST00000470183 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
RPGR-205ENST00000470183 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
RPGR-205ENST00000470183 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
RPGR-205ENST00000470183 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
RPGR-205ENST00000470183 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
RPGR-205ENST00000470183 VASPP50552 380 aaPredicted RBP10.83□□□□□ -0.68
RPGR-205ENST00000470183 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
RPGR-205ENST00000470183 SPDYE1Q8NFV5 336 aaPredicted RBP10.78□□□□□ -0.68
RPGR-205ENST00000470183 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
RPGR-205ENST00000470183 PITPNM1O00562 1244 aa10.68□□□□□ -0.7
RPGR-205ENST00000470183 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
RPGR-205ENST00000470183 MIER1Q8N108 512 aa10.68□□□□□ -0.7
RPGR-205ENST00000470183 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
RPGR-205ENST00000470183 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
RPGR-205ENST00000470183 PRR29P0C7W0 189 aa10.65□□□□□ -0.7
RPGR-205ENST00000470183 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
RPGR-205ENST00000470183 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
RPGR-205ENST00000470183 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
RPGR-205ENST00000470183 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
RPGR-205ENST00000470183 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
RPGR-205ENST00000470183 SPOCK2Q92563 424 aa10.54□□□□□ -0.72
RPGR-205ENST00000470183 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
RPGR-205ENST00000470183 MNX1P50219 401 aaPredicted RBP10.45□□□□□ -0.74
RPGR-205ENST00000470183 FXR2P51116 673 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPGR-205ENST00000470183 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
RPGR-205ENST00000470183 PRKAR2AP13861 404 aaKnown RBP10.41□□□□□ -0.74
RPGR-205ENST00000470183 PIP4P2Q8N4L2 257 aa10.4□□□□□ -0.74
RPGR-205ENST00000470183 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
RPGR-205ENST00000470183 NUBP1P53384 320 aa10.38□□□□□ -0.75
RPGR-205ENST00000470183 PKD2Q13563 968 aa10.38□□□□□ -0.75
RPGR-205ENST00000470183 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
RPGR-205ENST00000470183 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
RPGR-205ENST00000470183 GSE1Q14687 1217 aa10.31□□□□□ -0.76
RPGR-205ENST00000470183 RASEFQ8IZ41 740 aa10.31□□□□□ -0.76
RPGR-205ENST00000470183 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
RPGR-205ENST00000470183 DCAF8Q5TAQ9 597 aa10.3□□□□□ -0.76
RPGR-205ENST00000470183 FAM212AQ96EL1 285 aa10.3□□□□□ -0.76
RPGR-205ENST00000470183 TRIM41Q8WV44 630 aa10.26□□□□□ -0.77
RPGR-205ENST00000470183 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.77
RPGR-205ENST00000470183 RGL2O15211 777 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms