RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 DEFB105AQ8NG35 78 aa7.9□□□□□ -1.14
LIMD1-203ENST00000465039 TSPAN13O95857 204 aa7.89□□□□□ -1.15
LIMD1-203ENST00000465039 COX6CP09669 75 aa7.89□□□□□ -1.15
LIMD1-203ENST00000465039 CD164Q04900 197 aa7.89□□□□□ -1.15
LIMD1-203ENST00000465039 TRIAP1O43715 76 aa7.88□□□□□ -1.15
LIMD1-203ENST00000465039 F8WEM9 126 aa7.87□□□□□ -1.15
LIMD1-203ENST00000465039 K7ERJ3 54 aa7.87□□□□□ -1.15
LIMD1-203ENST00000465039 IGLV8-61A0A075B6I0 122 aa7.86□□□□□ -1.15
LIMD1-203ENST00000465039 H3BQ85 93 aa7.86□□□□□ -1.15
LIMD1-203ENST00000465039 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-203ENST00000465039 PSMB2P49721 201 aa7.85□□□□□ -1.15
LIMD1-203ENST00000465039 Q6JHZ5 121 aa7.85□□□□□ -1.15
LIMD1-203ENST00000465039 FAM218AQ96MZ4 157 aa7.84□□□□□ -1.15
LIMD1-203ENST00000465039 LIMD2Q9BT23 127 aa7.84□□□□□ -1.15
LIMD1-203ENST00000465039 LRP2P98164 4655 aa7.83□□□□□ -1.16
LIMD1-203ENST00000465039 PRR4Q16378 134 aa7.83□□□□□ -1.16
LIMD1-203ENST00000465039 Q5XG85 94 aa7.83□□□□□ -1.16
LIMD1-203ENST00000465039 DNAL4O96015 105 aa7.82□□□□□ -1.16
LIMD1-203ENST00000465039 SNHG12Q9BXW3 62 aa7.81□□□□□ -1.16
LIMD1-203ENST00000465039 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
LIMD1-203ENST00000465039 TRACP01848 142 aa7.8□□□□□ -1.16
LIMD1-203ENST00000465039 CLEC2BQ92478 149 aa7.8□□□□□ -1.16
LIMD1-203ENST00000465039 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
LIMD1-203ENST00000465039 IGLV7-46A0A075B6I9 117 aa7.77□□□□□ -1.17
LIMD1-203ENST00000465039 LST1O00453 97 aa7.77□□□□□ -1.17
LIMD1-203ENST00000465039 LYRM7Q5U5X0 104 aa7.77□□□□□ -1.17
LIMD1-203ENST00000465039 RETNLBQ9BQ08 111 aa7.77□□□□□ -1.17
LIMD1-203ENST00000465039 ORMDL1Q9P0S3 153 aa7.77□□□□□ -1.17
LIMD1-203ENST00000465039 TMEM256-PLSCR3K7ERE1 68 aa7.76□□□□□ -1.17
LIMD1-203ENST00000465039 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
LIMD1-203ENST00000465039 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
LIMD1-203ENST00000465039 Q6Q795 121 aa7.74□□□□□ -1.17
LIMD1-203ENST00000465039 TCL1BO95988 128 aa7.73□□□□□ -1.17
LIMD1-203ENST00000465039 IGFL1Q6UW32 110 aa7.73□□□□□ -1.17
LIMD1-203ENST00000465039 FABP2P12104 132 aa7.72□□□□□ -1.17
LIMD1-203ENST00000465039 UBE2V1Q13404 147 aa7.72□□□□□ -1.17
LIMD1-203ENST00000465039 ASB16-AS1Q495Z4 193 aa7.72□□□□□ -1.17
LIMD1-203ENST00000465039 TRBV20-1A0A075B6N2 111 aa7.7□□□□□ -1.18
LIMD1-203ENST00000465039 TRBV7-7A0A0K0K1E9 115 aa7.7□□□□□ -1.18
LIMD1-203ENST00000465039 H3BMG7 143 aa7.7□□□□□ -1.18
LIMD1-203ENST00000465039 ATXN8Q156A1 80 aa7.7□□□□□ -1.18
LIMD1-203ENST00000465039 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
LIMD1-203ENST00000465039 H3BUT2 72 aa7.69□□□□□ -1.18
LIMD1-203ENST00000465039 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
LIMD1-203ENST00000465039 BATFQ16520 125 aa7.68□□□□□ -1.18
LIMD1-203ENST00000465039 TEN1Q86WV5 123 aa7.68□□□□□ -1.18
LIMD1-203ENST00000465039 SS18L2Q9UHA2 77 aa7.68□□□□□ -1.18
LIMD1-203ENST00000465039 LPAP08519 4548 aa7.68□□□□□ -1.18
LIMD1-203ENST00000465039 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
LIMD1-203ENST00000465039 A0A0G2JQZ4 141 aa7.66□□□□□ -1.18
LIMD1-203ENST00000465039 C9orf118A6NHY6 69 aa7.66□□□□□ -1.18
LIMD1-203ENST00000465039 C1orf195Q5TG92 126 aa7.65□□□□□ -1.18
LIMD1-203ENST00000465039 ANKRD29Q8N6D5 301 aa7.64□□□□□ -1.19
LIMD1-203ENST00000465039 TRBV7-4A0A0J9YYF1 115 aa7.63□□□□□ -1.19
LIMD1-203ENST00000465039 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
LIMD1-203ENST00000465039 BAALC-AS2P0C853 105 aa7.62□□□□□ -1.19
LIMD1-203ENST00000465039 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
LIMD1-203ENST00000465039 NAA38Q9BRA0 125 aaKnown RBP7.62□□□□□ -1.19
LIMD1-203ENST00000465039 A0A1W2PPM0 123 aa7.61□□□□□ -1.19
LIMD1-203ENST00000465039 COL5A1-AS1Q5SY13 56 aa7.61□□□□□ -1.19
LIMD1-203ENST00000465039 JMJD7-PLA2G4BH0Y9G9 81 aa7.6□□□□□ -1.19
LIMD1-203ENST00000465039 RBM3P98179 157 aaKnown RBP7.6□□□□□ -1.19
LIMD1-203ENST00000465039 DSCR8Q96T75 97 aa7.59□□□□□ -1.19
LIMD1-203ENST00000465039 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
LIMD1-203ENST00000465039 PDE6GP18545 87 aa7.58□□□□□ -1.2
LIMD1-203ENST00000465039 A0A087WSZ3 146 aa7.57□□□□□ -1.2
LIMD1-203ENST00000465039 A0A1B0GW54 56 aa7.57□□□□□ -1.2
LIMD1-203ENST00000465039 XP32Q5T750 250 aa7.57□□□□□ -1.2
LIMD1-203ENST00000465039 H3BT86 120 aa7.56□□□□□ -1.2
LIMD1-203ENST00000465039 CCKP06307 115 aa7.56□□□□□ -1.2
LIMD1-203ENST00000465039 RNF213Q63HN8 5207 aa7.56□□□□□ -1.2
LIMD1-203ENST00000465039 C9JAW5 83 aa7.55□□□□□ -1.2
LIMD1-203ENST00000465039 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
LIMD1-203ENST00000465039 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
LIMD1-203ENST00000465039 OBSCN-AS1Q96MR7 158 aa7.53□□□□□ -1.2
LIMD1-203ENST00000465039 A0A1B0GV72 72 aa7.51□□□□□ -1.21
LIMD1-203ENST00000465039 SPCS1Q9Y6A9 102 aa7.51□□□□□ -1.21
LIMD1-203ENST00000465039 Q6ZQT0 140 aa7.49□□□□□ -1.21
LIMD1-203ENST00000465039 Q96NJ1 140 aa7.49□□□□□ -1.21
LIMD1-203ENST00000465039 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
LIMD1-203ENST00000465039 C9orf92A6NGG3 77 aa7.46□□□□□ -1.22
LIMD1-203ENST00000465039 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
LIMD1-203ENST00000465039 VPS25Q9BRG1 176 aa7.46□□□□□ -1.22
LIMD1-203ENST00000465039 LINC00472Q9H8W2 130 aa7.46□□□□□ -1.22
LIMD1-203ENST00000465039 K7EP34 96 aa7.45□□□□□ -1.22
LIMD1-203ENST00000465039 A0A0U1RQV1 116 aa7.44□□□□□ -1.22
LIMD1-203ENST00000465039 J3KT08 172 aa7.44□□□□□ -1.22
LIMD1-203ENST00000465039 C14orf132Q9NPU4 83 aa7.44□□□□□ -1.22
LIMD1-203ENST00000465039 MUC2Q02817 5179 aa7.43□□□□□ -1.22
LIMD1-203ENST00000465039 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
LIMD1-203ENST00000465039 SIGMAR1Q99720 223 aa7.43□□□□□ -1.22
LIMD1-203ENST00000465039 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
LIMD1-203ENST00000465039 IGKV4-1P06312 121 aa7.41□□□□□ -1.22
LIMD1-203ENST00000465039 Q75L30 129 aa7.4□□□□□ -1.22
LIMD1-203ENST00000465039 MTURNQ8N3F0 131 aa7.39□□□□□ -1.23
LIMD1-203ENST00000465039 PRO0461Q9UI25 63 aa7.39□□□□□ -1.23
LIMD1-203ENST00000465039 SMCPP49901 116 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-203ENST00000465039 F8W1H4 67 aa7.36□□□□□ -1.23
LIMD1-203ENST00000465039 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
LIMD1-203ENST00000465039 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms