RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TRIAP1O43715 76 aa8.29□□□□□ -1.08
SQSTM1-205ENST00000464493 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
SQSTM1-205ENST00000464493 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
SQSTM1-205ENST00000464493 PSMB2P49721 201 aa8.28□□□□□ -1.08
SQSTM1-205ENST00000464493 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
SQSTM1-205ENST00000464493 PPDPFLQ8WWR9 84 aa8.27□□□□□ -1.09
SQSTM1-205ENST00000464493 A0A1B0GX51 115 aa8.26□□□□□ -1.09
SQSTM1-205ENST00000464493 F8WEM9 126 aa8.26□□□□□ -1.09
SQSTM1-205ENST00000464493 M0R143 59 aa8.26□□□□□ -1.09
SQSTM1-205ENST00000464493 COX6CP09669 75 aa8.26□□□□□ -1.09
SQSTM1-205ENST00000464493 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
SQSTM1-205ENST00000464493 HRCT1Q6UXD1 115 aa8.26□□□□□ -1.09
SQSTM1-205ENST00000464493 CD164Q04900 197 aa8.24□□□□□ -1.09
SQSTM1-205ENST00000464493 SNHG12Q9BXW3 62 aa8.24□□□□□ -1.09
SQSTM1-205ENST00000464493 UBR4Q5T4S7 5183 aa8.23□□□□□ -1.09
SQSTM1-205ENST00000464493 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
SQSTM1-205ENST00000464493 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
SQSTM1-205ENST00000464493 A0A0G2JQZ4 141 aa8.22□□□□□ -1.09
SQSTM1-205ENST00000464493 GHRHP01286 108 aa8.22□□□□□ -1.09
SQSTM1-205ENST00000464493 FP248Q71RG6 208 aaPredicted RBP8.22□□□□□ -1.09
SQSTM1-205ENST00000464493 LIMD2Q9BT23 127 aa8.21□□□□□ -1.1
SQSTM1-205ENST00000464493 IGLV8-61A0A075B6I0 122 aa8.2□□□□□ -1.1
SQSTM1-205ENST00000464493 SCGB1C2P0DMR2 95 aa8.2□□□□□ -1.1
SQSTM1-205ENST00000464493 Q6JHZ5 121 aa8.2□□□□□ -1.1
SQSTM1-205ENST00000464493 DNAL4O96015 105 aa8.19□□□□□ -1.1
SQSTM1-205ENST00000464493 FABP2P12104 132 aa8.17□□□□□ -1.1
SQSTM1-205ENST00000464493 NDUFV3P56181 108 aaKnown RBP8.17□□□□□ -1.1
SQSTM1-205ENST00000464493 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
SQSTM1-205ENST00000464493 IGFL1Q6UW32 110 aa8.17□□□□□ -1.1
SQSTM1-205ENST00000464493 ORMDL1Q9P0S3 153 aa8.16□□□□□ -1.1
SQSTM1-205ENST00000464493 H3BQ85 93 aa8.15□□□□□ -1.1
SQSTM1-205ENST00000464493 H3BUT2 72 aa8.15□□□□□ -1.1
SQSTM1-205ENST00000464493 Q5XG85 94 aa8.15□□□□□ -1.1
SQSTM1-205ENST00000464493 BATFQ16520 125 aa8.14□□□□□ -1.11
SQSTM1-205ENST00000464493 LST1O00453 97 aa8.13□□□□□ -1.11
SQSTM1-205ENST00000464493 TRACP01848 142 aa8.13□□□□□ -1.11
SQSTM1-205ENST00000464493 CDIP1Q9H305 208 aa8.13□□□□□ -1.11
SQSTM1-205ENST00000464493 H3BMG7 143 aa8.12□□□□□ -1.11
SQSTM1-205ENST00000464493 TMEM256-PLSCR3K7ERE1 68 aa8.12□□□□□ -1.11
SQSTM1-205ENST00000464493 TCL1BO95988 128 aa8.11□□□□□ -1.11
SQSTM1-205ENST00000464493 NAA38Q9BRA0 125 aaKnown RBP8.11□□□□□ -1.11
SQSTM1-205ENST00000464493 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
SQSTM1-205ENST00000464493 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
SQSTM1-205ENST00000464493 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
SQSTM1-205ENST00000464493 UBE2V1Q13404 147 aa8.07□□□□□ -1.12
SQSTM1-205ENST00000464493 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
SQSTM1-205ENST00000464493 Q6Q795 121 aa8.06□□□□□ -1.12
SQSTM1-205ENST00000464493 TEN1Q86WV5 123 aa8.06□□□□□ -1.12
SQSTM1-205ENST00000464493 BAALC-AS2P0C853 105 aa8.05□□□□□ -1.12
SQSTM1-205ENST00000464493 ASB16-AS1Q495Z4 193 aa8.05□□□□□ -1.12
SQSTM1-205ENST00000464493 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
SQSTM1-205ENST00000464493 A0A1B0GV72 72 aa8.04□□□□□ -1.12
SQSTM1-205ENST00000464493 ANKRD29Q8N6D5 301 aa8.04□□□□□ -1.12
SQSTM1-205ENST00000464493 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
SQSTM1-205ENST00000464493 TRBV20-1A0A075B6N2 111 aa8.02□□□□□ -1.13
SQSTM1-205ENST00000464493 TAX1BP3O14907 124 aa8.02□□□□□ -1.13
SQSTM1-205ENST00000464493 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
SQSTM1-205ENST00000464493 A0A1W2PNM2 257 aa8.01□□□□□ -1.13
SQSTM1-205ENST00000464493 SS18L2Q9UHA2 77 aa8□□□□□ -1.13
SQSTM1-205ENST00000464493 A0A087WSZ3 146 aa7.99□□□□□ -1.13
SQSTM1-205ENST00000464493 RBM3P98179 157 aaKnown RBP7.99□□□□□ -1.13
SQSTM1-205ENST00000464493 TRBV7-4A0A0J9YYF1 115 aa7.98□□□□□ -1.13
SQSTM1-205ENST00000464493 A0A1W2PPM0 123 aa7.98□□□□□ -1.13
SQSTM1-205ENST00000464493 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
SQSTM1-205ENST00000464493 MUC17Q685J3 4493 aa7.97□□□□□ -1.13
SQSTM1-205ENST00000464493 DSCR8Q96T75 97 aa7.97□□□□□ -1.13
SQSTM1-205ENST00000464493 CCKP06307 115 aa7.96□□□□□ -1.14
SQSTM1-205ENST00000464493 XP32Q5T750 250 aa7.96□□□□□ -1.14
SQSTM1-205ENST00000464493 C9JAW5 83 aa7.95□□□□□ -1.14
SQSTM1-205ENST00000464493 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
SQSTM1-205ENST00000464493 MUC2Q02817 5179 aa7.94□□□□□ -1.14
SQSTM1-205ENST00000464493 JMJD7-PLA2G4BH0Y9G9 81 aa7.93□□□□□ -1.14
SQSTM1-205ENST00000464493 PCP4L1A6NKN8 68 aa7.92□□□□□ -1.14
SQSTM1-205ENST00000464493 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
SQSTM1-205ENST00000464493 VPS25Q9BRG1 176 aa7.92□□□□□ -1.14
SQSTM1-205ENST00000464493 Q96NJ1 140 aa7.9□□□□□ -1.14
SQSTM1-205ENST00000464493 SPCS1Q9Y6A9 102 aa7.88□□□□□ -1.15
SQSTM1-205ENST00000464493 LOC110117498A0A087WWA1 95 aa7.87□□□□□ -1.15
SQSTM1-205ENST00000464493 H3BT86 120 aa7.87□□□□□ -1.15
SQSTM1-205ENST00000464493 PDE6GP18545 87 aa7.87□□□□□ -1.15
SQSTM1-205ENST00000464493 Q6ZQT0 140 aa7.86□□□□□ -1.15
SQSTM1-205ENST00000464493 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
SQSTM1-205ENST00000464493 OBSCN-AS1Q96MR7 158 aa7.86□□□□□ -1.15
SQSTM1-205ENST00000464493 C21orf62-AS1Q17RA5 79 aa7.85□□□□□ -1.15
SQSTM1-205ENST00000464493 C14orf132Q9NPU4 83 aa7.85□□□□□ -1.15
SQSTM1-205ENST00000464493 IGKV4-1P06312 121 aa7.84□□□□□ -1.15
SQSTM1-205ENST00000464493 LINC00472Q9H8W2 130 aa7.84□□□□□ -1.15
SQSTM1-205ENST00000464493 SIGMAR1Q99720 223 aa7.83□□□□□ -1.16
SQSTM1-205ENST00000464493 A0A1B0GW54 56 aa7.82□□□□□ -1.16
SQSTM1-205ENST00000464493 DEFB116Q30KQ4 102 aa7.82□□□□□ -1.16
SQSTM1-205ENST00000464493 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
SQSTM1-205ENST00000464493 PCOTHQ58A44 107 aa7.81□□□□□ -1.16
SQSTM1-205ENST00000464493 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
SQSTM1-205ENST00000464493 K7EP34 96 aa7.79□□□□□ -1.16
SQSTM1-205ENST00000464493 KRTAP4-1Q9BYQ7 146 aa7.79□□□□□ -1.16
SQSTM1-205ENST00000464493 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
SQSTM1-205ENST00000464493 DSCR10P59022 87 aa7.76□□□□□ -1.17
SQSTM1-205ENST00000464493 Q75L30 129 aa7.76□□□□□ -1.17
SQSTM1-205ENST00000464493 J3KT08 172 aa7.75□□□□□ -1.17
SQSTM1-205ENST00000464493 LINC00313P59037 77 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms