RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
CHRNA4-202ENST00000463705 XIRP2A4UGR9 3374 aa8.32□□□□□ -1.08
CHRNA4-202ENST00000463705 IGSF10Q6WRI0 2623 aa8.32□□□□□ -1.08
CHRNA4-202ENST00000463705 UNC79Q9P2D8 2635 aa8.29□□□□□ -1.08
CHRNA4-202ENST00000463705 VPS13AQ96RL7 3174 aa8.29□□□□□ -1.08
CHRNA4-202ENST00000463705 KRTAP26-1Q6PEX3 210 aa8.29□□□□□ -1.08
CHRNA4-202ENST00000463705 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
CHRNA4-202ENST00000463705 CDH23Q9H251 3354 aa8.29□□□□□ -1.08
CHRNA4-202ENST00000463705 Q8N1X5 172 aa8.28□□□□□ -1.08
CHRNA4-202ENST00000463705 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
CHRNA4-202ENST00000463705 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.08
CHRNA4-202ENST00000463705 MMP24-AS1A0A0U1RRL7 71 aa8.26□□□□□ -1.09
CHRNA4-202ENST00000463705 MAP1AP78559 2803 aaPredicted RBP8.26□□□□□ -1.09
CHRNA4-202ENST00000463705 GCN1Q92616 2671 aaKnown RBP8.25□□□□□ -1.09
CHRNA4-202ENST00000463705 Q1T7F1 81 aa8.24□□□□□ -1.09
CHRNA4-202ENST00000463705 COL6A5A8TX70 2615 aa8.24□□□□□ -1.09
CHRNA4-202ENST00000463705 Q5XG85 94 aa8.24□□□□□ -1.09
CHRNA4-202ENST00000463705 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
CHRNA4-202ENST00000463705 CDC42SE1Q9NRR8 79 aa8.24□□□□□ -1.09
CHRNA4-202ENST00000463705 Q6ZSA8 131 aa8.23□□□□□ -1.09
CHRNA4-202ENST00000463705 STAB1Q9NY15 2570 aa8.22□□□□□ -1.09
CHRNA4-202ENST00000463705 FRYQ5TBA9 3013 aa8.21□□□□□ -1.09
CHRNA4-202ENST00000463705 HRES1P13985 223 aa8.2□□□□□ -1.1
CHRNA4-202ENST00000463705 ZCCHC13Q8WW36 166 aaKnown RBP8.2□□□□□ -1.1
CHRNA4-202ENST00000463705 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
CHRNA4-202ENST00000463705 OXTP01178 125 aa8.18□□□□□ -1.1
CHRNA4-202ENST00000463705 NOTCH1P46531 2555 aa8.18□□□□□ -1.1
CHRNA4-202ENST00000463705 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
CHRNA4-202ENST00000463705 LINC00483Q53H64 154 aa8.15□□□□□ -1.11
CHRNA4-202ENST00000463705 LCE6AA0A183 80 aa8.13□□□□□ -1.11
CHRNA4-202ENST00000463705 SZT2Q5T011 3432 aa8.13□□□□□ -1.11
CHRNA4-202ENST00000463705 NBEAL2Q6ZNJ1 2754 aa8.12□□□□□ -1.11
CHRNA4-202ENST00000463705 Q75L30 129 aa8.12□□□□□ -1.11
CHRNA4-202ENST00000463705 UBR5O95071 2799 aaPredicted RBP8.12□□□□□ -1.11
CHRNA4-202ENST00000463705 LCA10Q71F78 164 aa8.11□□□□□ -1.11
CHRNA4-202ENST00000463705 LUZP6Q538Z0 58 aa8.11□□□□□ -1.11
CHRNA4-202ENST00000463705 A0A0D9SG42 100 aa8.1□□□□□ -1.11
CHRNA4-202ENST00000463705 Q5W150 140 aa8.1□□□□□ -1.11
CHRNA4-202ENST00000463705 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
CHRNA4-202ENST00000463705 LAMA1P25391 3075 aa8.1□□□□□ -1.11
CHRNA4-202ENST00000463705 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
CHRNA4-202ENST00000463705 A0A1B0GU33 70 aa8.08□□□□□ -1.12
CHRNA4-202ENST00000463705 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
CHRNA4-202ENST00000463705 KRTAP4-16G5E9R7 235 aaPredicted RBP8.07□□□□□ -1.12
CHRNA4-202ENST00000463705 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
CHRNA4-202ENST00000463705 KRTAP10-1P60331 282 aa8.07□□□□□ -1.12
CHRNA4-202ENST00000463705 CELSR3Q9NYQ7 3312 aa8.07□□□□□ -1.12
CHRNA4-202ENST00000463705 FLNCQ14315 2725 aa8.06□□□□□ -1.12
CHRNA4-202ENST00000463705 Q6ZR54 194 aa8.06□□□□□ -1.12
CHRNA4-202ENST00000463705 VCANP13611 3396 aa8.04□□□□□ -1.12
CHRNA4-202ENST00000463705 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
CHRNA4-202ENST00000463705 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
CHRNA4-202ENST00000463705 S4R3F8 94 aa8.03□□□□□ -1.12
CHRNA4-202ENST00000463705 Q5VSD8 79 aa8.03□□□□□ -1.12
CHRNA4-202ENST00000463705 ATMQ13315 3056 aa8.02□□□□□ -1.13
CHRNA4-202ENST00000463705 ITPR1Q14643 2758 aa8.02□□□□□ -1.13
CHRNA4-202ENST00000463705 KRTAP21-3Q3LHN1 58 aa8.02□□□□□ -1.13
CHRNA4-202ENST00000463705 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
CHRNA4-202ENST00000463705 PANO1I0J062 215 aa7.99□□□□□ -1.13
CHRNA4-202ENST00000463705 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
CHRNA4-202ENST00000463705 SPINK7P58062 85 aa7.99□□□□□ -1.13
CHRNA4-202ENST00000463705 SEC61BP60468 96 aaKnown RBP7.98□□□□□ -1.13
CHRNA4-202ENST00000463705 KALRNO60229 2985 aa7.98□□□□□ -1.13
CHRNA4-202ENST00000463705 SPEGQ15772 3267 aa7.97□□□□□ -1.13
CHRNA4-202ENST00000463705 ITPR2Q14571 2701 aa7.97□□□□□ -1.13
CHRNA4-202ENST00000463705 NBEAQ8NFP9 2946 aa7.96□□□□□ -1.13
CHRNA4-202ENST00000463705 FRYLO94915 3013 aa7.96□□□□□ -1.14
CHRNA4-202ENST00000463705 USP34Q70CQ2 3546 aa7.95□□□□□ -1.14
CHRNA4-202ENST00000463705 ADGRG4Q8IZF6 3080 aa7.95□□□□□ -1.14
CHRNA4-202ENST00000463705 COL12A1Q99715 3063 aa7.94□□□□□ -1.14
CHRNA4-202ENST00000463705 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
CHRNA4-202ENST00000463705 CAMK2N1Q7Z7J9 78 aa7.93□□□□□ -1.14
CHRNA4-202ENST00000463705 BOD1L1Q8NFC6 3051 aa7.93□□□□□ -1.14
CHRNA4-202ENST00000463705 TACC2O95359 2948 aa7.92□□□□□ -1.14
CHRNA4-202ENST00000463705 DMXL2Q8TDJ6 3036 aa7.9□□□□□ -1.14
CHRNA4-202ENST00000463705 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.14
CHRNA4-202ENST00000463705 FREM2Q5SZK8 3169 aa7.9□□□□□ -1.14
CHRNA4-202ENST00000463705 M0R2T5 61 aa7.9□□□□□ -1.14
CHRNA4-202ENST00000463705 Q5VV11 94 aa7.89□□□□□ -1.15
CHRNA4-202ENST00000463705 LRBAP50851 2863 aa7.89□□□□□ -1.15
CHRNA4-202ENST00000463705 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
CHRNA4-202ENST00000463705 Q6ZRN7 208 aaPredicted RBP7.89□□□□□ -1.15
CHRNA4-202ENST00000463705 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
CHRNA4-202ENST00000463705 UTP20O75691 2785 aaKnown RBP7.87□□□□□ -1.15
CHRNA4-202ENST00000463705 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
CHRNA4-202ENST00000463705 MYO15AQ9UKN7 3530 aa7.85□□□□□ -1.15
CHRNA4-202ENST00000463705 COL6A3P12111 3177 aa7.84□□□□□ -1.15
CHRNA4-202ENST00000463705 KRTAP11-1Q8IUC1 163 aa7.84□□□□□ -1.16
CHRNA4-202ENST00000463705 KRTAP7-1Q8IUC3 87 aa7.83□□□□□ -1.16
CHRNA4-202ENST00000463705 STAB2Q8WWQ8 2551 aa7.83□□□□□ -1.16
CHRNA4-202ENST00000463705 A0A087X002 238 aa7.82□□□□□ -1.16
CHRNA4-202ENST00000463705 HIVEP1P15822 2718 aa7.8□□□□□ -1.16
CHRNA4-202ENST00000463705 R4GN34 69 aa7.8□□□□□ -1.16
CHRNA4-202ENST00000463705 TNRC18O15417 2968 aaPredicted RBP7.79□□□□□ -1.16
CHRNA4-202ENST00000463705 KMT2BQ9UMN6 2715 aaPredicted RBP7.77□□□□□ -1.16
CHRNA4-202ENST00000463705 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
CHRNA4-202ENST00000463705 APCP25054 2843 aa7.76□□□□□ -1.17
CHRNA4-202ENST00000463705 H1FX-AS1Q4G0G2 97 aa7.75□□□□□ -1.17
CHRNA4-202ENST00000463705 ZZEF1O43149 2961 aa7.75□□□□□ -1.17
CHRNA4-202ENST00000463705 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms