RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PRO1933Q9H354 126 aa6.03□□□□□ -1.44
TRAPPC12-213ENST00000461577 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
TRAPPC12-213ENST00000461577 F8WEM9 126 aa6.02□□□□□ -1.45
TRAPPC12-213ENST00000461577 SNCGO76070 127 aa6.02□□□□□ -1.45
TRAPPC12-213ENST00000461577 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC12-213ENST00000461577 PRO1854Q9UHT4 67 aa6.02□□□□□ -1.45
TRAPPC12-213ENST00000461577 H0YGX0 51 aa6.01□□□□□ -1.45
TRAPPC12-213ENST00000461577 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC12-213ENST00000461577 LIMD2Q9BT23 127 aa6□□□□□ -1.45
TRAPPC12-213ENST00000461577 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
TRAPPC12-213ENST00000461577 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
TRAPPC12-213ENST00000461577 CD164Q04900 197 aa5.98□□□□□ -1.45
TRAPPC12-213ENST00000461577 PPDPFLQ8WWR9 84 aa5.97□□□□□ -1.45
TRAPPC12-213ENST00000461577 SNHG12Q9BXW3 62 aa5.97□□□□□ -1.45
TRAPPC12-213ENST00000461577 PSMB2P49721 201 aa5.96□□□□□ -1.46
TRAPPC12-213ENST00000461577 OCIAD2Q56VL3 154 aa5.96□□□□□ -1.46
TRAPPC12-213ENST00000461577 A0A0G2JQZ4 141 aa5.95□□□□□ -1.46
TRAPPC12-213ENST00000461577 A0A1B0GX51 115 aa5.95□□□□□ -1.46
TRAPPC12-213ENST00000461577 K7ERJ3 54 aa5.95□□□□□ -1.46
TRAPPC12-213ENST00000461577 TRIAP1O43715 76 aa5.95□□□□□ -1.46
TRAPPC12-213ENST00000461577 SMIM6P0DI80 62 aa5.95□□□□□ -1.46
TRAPPC12-213ENST00000461577 FAM218AQ96MZ4 157 aa5.95□□□□□ -1.46
TRAPPC12-213ENST00000461577 GHRHP01286 108 aa5.94□□□□□ -1.46
TRAPPC12-213ENST00000461577 COX6CP09669 75 aa5.94□□□□□ -1.46
TRAPPC12-213ENST00000461577 Q6JHZ5 121 aa5.94□□□□□ -1.46
TRAPPC12-213ENST00000461577 KRTAP13-3Q3SY46 172 aa5.93□□□□□ -1.46
TRAPPC12-213ENST00000461577 IGLV8-61A0A075B6I0 122 aa5.92□□□□□ -1.46
TRAPPC12-213ENST00000461577 CLEC2BQ92478 149 aa5.92□□□□□ -1.46
TRAPPC12-213ENST00000461577 TCL1BO95988 128 aa5.91□□□□□ -1.46
TRAPPC12-213ENST00000461577 DNAL4O96015 105 aa5.91□□□□□ -1.46
TRAPPC12-213ENST00000461577 Q5XG85 94 aa5.91□□□□□ -1.46
TRAPPC12-213ENST00000461577 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
TRAPPC12-213ENST00000461577 H3BUT2 72 aa5.9□□□□□ -1.46
TRAPPC12-213ENST00000461577 M0R143 59 aa5.9□□□□□ -1.46
TRAPPC12-213ENST00000461577 SCGB1C2P0DMR2 95 aa5.9□□□□□ -1.46
TRAPPC12-213ENST00000461577 FABP2P12104 132 aa5.9□□□□□ -1.46
TRAPPC12-213ENST00000461577 MUC17Q685J3 4493 aa5.89□□□□□ -1.47
TRAPPC12-213ENST00000461577 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
TRAPPC12-213ENST00000461577 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
TRAPPC12-213ENST00000461577 TRBV7-7A0A0K0K1E9 115 aa5.88□□□□□ -1.47
TRAPPC12-213ENST00000461577 H3BQ85 93 aa5.88□□□□□ -1.47
TRAPPC12-213ENST00000461577 ORMDL1Q9P0S3 153 aa5.88□□□□□ -1.47
TRAPPC12-213ENST00000461577 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
TRAPPC12-213ENST00000461577 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
TRAPPC12-213ENST00000461577 H3BMG7 143 aa5.86□□□□□ -1.47
TRAPPC12-213ENST00000461577 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
TRAPPC12-213ENST00000461577 C9orf92A6NGG3 77 aa5.84□□□□□ -1.47
TRAPPC12-213ENST00000461577 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
TRAPPC12-213ENST00000461577 LST1O00453 97 aa5.83□□□□□ -1.48
TRAPPC12-213ENST00000461577 TRACP01848 142 aa5.83□□□□□ -1.48
TRAPPC12-213ENST00000461577 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
TRAPPC12-213ENST00000461577 XP32Q5T750 250 aa5.83□□□□□ -1.48
TRAPPC12-213ENST00000461577 TEN1Q86WV5 123 aa5.83□□□□□ -1.48
TRAPPC12-213ENST00000461577 A0A1B0GV72 72 aa5.82□□□□□ -1.48
TRAPPC12-213ENST00000461577 Q6Q795 121 aa5.82□□□□□ -1.48
TRAPPC12-213ENST00000461577 SS18L2Q9UHA2 77 aa5.82□□□□□ -1.48
TRAPPC12-213ENST00000461577 A0A0U1RQV1 116 aa5.81□□□□□ -1.48
TRAPPC12-213ENST00000461577 SMCPP49901 116 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC12-213ENST00000461577 UBE2V1Q13404 147 aa5.81□□□□□ -1.48
TRAPPC12-213ENST00000461577 BATFQ16520 125 aa5.81□□□□□ -1.48
TRAPPC12-213ENST00000461577 ANKRD29Q8N6D5 301 aa5.81□□□□□ -1.48
TRAPPC12-213ENST00000461577 NAA38Q9BRA0 125 aaKnown RBP5.8□□□□□ -1.48
TRAPPC12-213ENST00000461577 A0A087WSZ3 146 aa5.79□□□□□ -1.48
TRAPPC12-213ENST00000461577 ATXN8Q156A1 80 aa5.79□□□□□ -1.48
TRAPPC12-213ENST00000461577 A0A1W2PNM2 257 aa5.78□□□□□ -1.48
TRAPPC12-213ENST00000461577 BAALC-AS2P0C853 105 aa5.78□□□□□ -1.48
TRAPPC12-213ENST00000461577 LYRM7Q5U5X0 104 aa5.78□□□□□ -1.48
TRAPPC12-213ENST00000461577 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC12-213ENST00000461577 TRBV7-4A0A0J9YYF1 115 aa5.75□□□□□ -1.49
TRAPPC12-213ENST00000461577 CCKP06307 115 aa5.75□□□□□ -1.49
TRAPPC12-213ENST00000461577 RBM3P98179 157 aaKnown RBP5.75□□□□□ -1.49
TRAPPC12-213ENST00000461577 DSCR8Q96T75 97 aa5.75□□□□□ -1.49
TRAPPC12-213ENST00000461577 MUC2Q02817 5179 aa5.74□□□□□ -1.49
TRAPPC12-213ENST00000461577 VPS25Q9BRG1 176 aa5.74□□□□□ -1.49
TRAPPC12-213ENST00000461577 TRBV20-1A0A075B6N2 111 aa5.73□□□□□ -1.49
TRAPPC12-213ENST00000461577 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
TRAPPC12-213ENST00000461577 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
TRAPPC12-213ENST00000461577 C9JAW5 83 aa5.71□□□□□ -1.5
TRAPPC12-213ENST00000461577 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
TRAPPC12-213ENST00000461577 OBSCN-AS1Q96MR7 158 aa5.71□□□□□ -1.5
TRAPPC12-213ENST00000461577 Q96NJ1 140 aa5.71□□□□□ -1.5
TRAPPC12-213ENST00000461577 SIGMAR1Q99720 223 aa5.71□□□□□ -1.5
TRAPPC12-213ENST00000461577 JMJD7-PLA2G4BH0Y9G9 81 aa5.7□□□□□ -1.5
TRAPPC12-213ENST00000461577 TAX1BP3O14907 124 aa5.7□□□□□ -1.5
TRAPPC12-213ENST00000461577 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
TRAPPC12-213ENST00000461577 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
TRAPPC12-213ENST00000461577 A0A1W2PPM0 123 aa5.68□□□□□ -1.5
TRAPPC12-213ENST00000461577 C21orf62-AS1Q17RA5 79 aa5.68□□□□□ -1.5
TRAPPC12-213ENST00000461577 PCP4L1A6NKN8 68 aa5.66□□□□□ -1.5
TRAPPC12-213ENST00000461577 DEFB116Q30KQ4 102 aa5.66□□□□□ -1.5
TRAPPC12-213ENST00000461577 Q75L30 129 aa5.66□□□□□ -1.5
TRAPPC12-213ENST00000461577 LOC110117498A0A087WWA1 95 aa5.65□□□□□ -1.5
TRAPPC12-213ENST00000461577 PDE6GP18545 87 aa5.65□□□□□ -1.5
TRAPPC12-213ENST00000461577 DSCR10P59022 87 aa5.65□□□□□ -1.5
TRAPPC12-213ENST00000461577 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
TRAPPC12-213ENST00000461577 Q6ZQT0 140 aa5.65□□□□□ -1.5
TRAPPC12-213ENST00000461577 LINC00472Q9H8W2 130 aa5.65□□□□□ -1.5
TRAPPC12-213ENST00000461577 H3BT86 120 aa5.64□□□□□ -1.51
TRAPPC12-213ENST00000461577 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
TRAPPC12-213ENST00000461577 ATP11AUNQ6ZP68 121 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms