RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 COX6CP09669 75 aa9.36□□□□□ -0.91
SHANK1-205ENST00000461154 PRR4Q16378 134 aa9.36□□□□□ -0.91
SHANK1-205ENST00000461154 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
SHANK1-205ENST00000461154 PPDPFLQ8WWR9 84 aa9.36□□□□□ -0.91
SHANK1-205ENST00000461154 A0A1B0GX51 115 aa9.35□□□□□ -0.91
SHANK1-205ENST00000461154 F8WEM9 126 aa9.34□□□□□ -0.91
SHANK1-205ENST00000461154 RPS29P62273 56 aaKnown RBP9.34□□□□□ -0.91
SHANK1-205ENST00000461154 OCIAD2Q56VL3 154 aa9.34□□□□□ -0.91
SHANK1-205ENST00000461154 FAM218AQ96MZ4 157 aa9.33□□□□□ -0.92
SHANK1-205ENST00000461154 GHRHP01286 108 aa9.32□□□□□ -0.92
SHANK1-205ENST00000461154 SNHG12Q9BXW3 62 aa9.3□□□□□ -0.92
SHANK1-205ENST00000461154 CD164Q04900 197 aa9.29□□□□□ -0.92
SHANK1-205ENST00000461154 RETNLBQ9BQ08 111 aa9.29□□□□□ -0.92
SHANK1-205ENST00000461154 DNAL4O96015 105 aa9.28□□□□□ -0.92
SHANK1-205ENST00000461154 CLEC2BQ92478 149 aa9.28□□□□□ -0.92
SHANK1-205ENST00000461154 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
SHANK1-205ENST00000461154 LIMD2Q9BT23 127 aa9.27□□□□□ -0.93
SHANK1-205ENST00000461154 Q6JHZ5 121 aa9.26□□□□□ -0.93
SHANK1-205ENST00000461154 HRCT1Q6UXD1 115 aa9.26□□□□□ -0.93
SHANK1-205ENST00000461154 IGLV8-61A0A075B6I0 122 aa9.24□□□□□ -0.93
SHANK1-205ENST00000461154 H3BQ85 93 aa9.24□□□□□ -0.93
SHANK1-205ENST00000461154 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
SHANK1-205ENST00000461154 ORMDL1Q9P0S3 153 aa9.23□□□□□ -0.93
SHANK1-205ENST00000461154 LRP2P98164 4655 aa9.23□□□□□ -0.93
SHANK1-205ENST00000461154 IGLV7-46A0A075B6I9 117 aa9.22□□□□□ -0.93
SHANK1-205ENST00000461154 BATFQ16520 125 aa9.22□□□□□ -0.93
SHANK1-205ENST00000461154 TRACP01848 142 aa9.21□□□□□ -0.94
SHANK1-205ENST00000461154 FABP2P12104 132 aa9.21□□□□□ -0.94
SHANK1-205ENST00000461154 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.94
SHANK1-205ENST00000461154 LST1O00453 97 aa9.2□□□□□ -0.94
SHANK1-205ENST00000461154 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
SHANK1-205ENST00000461154 IGFL1Q6UW32 110 aa9.19□□□□□ -0.94
SHANK1-205ENST00000461154 TMEM256-PLSCR3K7ERE1 68 aa9.18□□□□□ -0.94
SHANK1-205ENST00000461154 H3BUT2 72 aa9.17□□□□□ -0.94
SHANK1-205ENST00000461154 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
SHANK1-205ENST00000461154 LYRM7Q5U5X0 104 aa9.17□□□□□ -0.94
SHANK1-205ENST00000461154 Q5XG85 94 aa9.17□□□□□ -0.94
SHANK1-205ENST00000461154 H3BMG7 143 aa9.16□□□□□ -0.94
SHANK1-205ENST00000461154 NAA38Q9BRA0 125 aaKnown RBP9.15□□□□□ -0.94
SHANK1-205ENST00000461154 TCL1BO95988 128 aa9.14□□□□□ -0.95
SHANK1-205ENST00000461154 ATXN8Q156A1 80 aa9.14□□□□□ -0.95
SHANK1-205ENST00000461154 LPAP08519 4548 aa9.13□□□□□ -0.95
SHANK1-205ENST00000461154 TRBV7-7A0A0K0K1E9 115 aa9.12□□□□□ -0.95
SHANK1-205ENST00000461154 UBE2V1Q13404 147 aa9.11□□□□□ -0.95
SHANK1-205ENST00000461154 CDIP1Q9H305 208 aa9.11□□□□□ -0.95
SHANK1-205ENST00000461154 TRBV20-1A0A075B6N2 111 aa9.09□□□□□ -0.95
SHANK1-205ENST00000461154 C9orf118A6NHY6 69 aa9.09□□□□□ -0.95
SHANK1-205ENST00000461154 Q6Q795 121 aa9.09□□□□□ -0.95
SHANK1-205ENST00000461154 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
SHANK1-205ENST00000461154 TAX1BP3O14907 124 aa9.07□□□□□ -0.96
SHANK1-205ENST00000461154 BAALC-AS2P0C853 105 aa9.07□□□□□ -0.96
SHANK1-205ENST00000461154 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
SHANK1-205ENST00000461154 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
SHANK1-205ENST00000461154 ANKRD29Q8N6D5 301 aa9.07□□□□□ -0.96
SHANK1-205ENST00000461154 RNF213Q63HN8 5207 aa9.06□□□□□ -0.96
SHANK1-205ENST00000461154 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
SHANK1-205ENST00000461154 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
SHANK1-205ENST00000461154 A0A1B0GV72 72 aa9.05□□□□□ -0.96
SHANK1-205ENST00000461154 A0A1W2PPM0 123 aa9.03□□□□□ -0.96
SHANK1-205ENST00000461154 RBM3P98179 157 aaKnown RBP9.02□□□□□ -0.97
SHANK1-205ENST00000461154 COL5A1-AS1Q5SY13 56 aa9.02□□□□□ -0.97
SHANK1-205ENST00000461154 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
SHANK1-205ENST00000461154 DSCR8Q96T75 97 aa9.01□□□□□ -0.97
SHANK1-205ENST00000461154 A0A087WSZ3 146 aa9□□□□□ -0.97
SHANK1-205ENST00000461154 TRBV7-4A0A0J9YYF1 115 aa9□□□□□ -0.97
SHANK1-205ENST00000461154 PCP4L1A6NKN8 68 aa8.99□□□□□ -0.97
SHANK1-205ENST00000461154 C9JAW5 83 aa8.99□□□□□ -0.97
SHANK1-205ENST00000461154 JMJD7-PLA2G4BH0Y9G9 81 aa8.98□□□□□ -0.97
SHANK1-205ENST00000461154 CCKP06307 115 aa8.98□□□□□ -0.97
SHANK1-205ENST00000461154 C9orf92A6NGG3 77 aa8.94□□□□□ -0.98
SHANK1-205ENST00000461154 VPS25Q9BRG1 176 aa8.94□□□□□ -0.98
SHANK1-205ENST00000461154 SPCS1Q9Y6A9 102 aa8.94□□□□□ -0.98
SHANK1-205ENST00000461154 H3BT86 120 aa8.93□□□□□ -0.98
SHANK1-205ENST00000461154 XP32Q5T750 250 aa8.93□□□□□ -0.98
SHANK1-205ENST00000461154 PDE6GP18545 87 aa8.92□□□□□ -0.98
SHANK1-205ENST00000461154 C21orf62-AS1Q17RA5 79 aa8.92□□□□□ -0.98
SHANK1-205ENST00000461154 A0A0U1RQV1 116 aa8.9□□□□□ -0.98
SHANK1-205ENST00000461154 LOC110117498A0A087WWA1 95 aa8.89□□□□□ -0.99
SHANK1-205ENST00000461154 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
SHANK1-205ENST00000461154 Q6ZQT0 140 aa8.88□□□□□ -0.99
SHANK1-205ENST00000461154 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
SHANK1-205ENST00000461154 Q96NJ1 140 aa8.88□□□□□ -0.99
SHANK1-205ENST00000461154 MTURNQ8N3F0 131 aa8.87□□□□□ -0.99
SHANK1-205ENST00000461154 A0A1B0GW54 56 aa8.86□□□□□ -0.99
SHANK1-205ENST00000461154 C14orf132Q9NPU4 83 aa8.86□□□□□ -0.99
SHANK1-205ENST00000461154 SIGMAR1Q99720 223 aa8.85□□□□□ -0.99
SHANK1-205ENST00000461154 K7EP34 96 aa8.84□□□□□ -0.99
SHANK1-205ENST00000461154 IGKV4-1P06312 121 aa8.83□□□□□ -1
SHANK1-205ENST00000461154 MUC17Q685J3 4493 aa8.82□□□□□ -1
SHANK1-205ENST00000461154 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
SHANK1-205ENST00000461154 GTF2H5Q6ZYL4 71 aa8.81□□□□□ -1
SHANK1-205ENST00000461154 J3KT08 172 aa8.77□□□□□ -1.01
SHANK1-205ENST00000461154 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
SHANK1-205ENST00000461154 DEFB116Q30KQ4 102 aa8.77□□□□□ -1.01
SHANK1-205ENST00000461154 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
SHANK1-205ENST00000461154 KRTAP9-2Q9BYQ4 174 aa8.76□□□□□ -1.01
SHANK1-205ENST00000461154 MUC2Q02817 5179 aa8.76□□□□□ -1.01
SHANK1-205ENST00000461154 PRO0461Q9UI25 63 aa8.75□□□□□ -1.01
SHANK1-205ENST00000461154 PCOTHQ58A44 107 aa8.74□□□□□ -1.01
SHANK1-205ENST00000461154 LINC00313P59037 77 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms