RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 ABCC6O95255 1503 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 HECTD1Q9ULT8 2610 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 H0YGX0 51 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 H3BUA1 57 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 TMEM167BQ9NRX6 74 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 TIMM8BQ9Y5J9 83 aaPredicted RBP0.23□□□□□ -2.37
SYPL1-203ENST00000460770 DDX60LQ5H9U9 1706 aaKnown RBP0.23□□□□□ -2.37
SYPL1-203ENST00000460770 PLCH1Q4KWH8 1693 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 ABCA9Q8IUA7 1624 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 CPS1P31327 1500 aa0.23□□□□□ -2.37
SYPL1-203ENST00000460770 EEA1Q15075 1411 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 PRRC2CQ9Y520 2896 aaKnown RBP0.22□□□□□ -2.37
SYPL1-203ENST00000460770 VWFP04275 2813 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 TENM4Q6N022 2769 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 PRM1P04553 51 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 PRLHP81277 87 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 WT1-ASQ06250 92 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 DEFB106AQ8N104 65 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 NESP48681 1621 aa0.22□□□□□ -2.37
SYPL1-203ENST00000460770 TRANK1O15050 2925 aa0.21□□□□□ -2.38
SYPL1-203ENST00000460770 DEPDC5O75140 1603 aa0.21□□□□□ -2.38
SYPL1-203ENST00000460770 CICQ96RK0 1608 aaPredicted RBP0.21□□□□□ -2.38
SYPL1-203ENST00000460770 INO80Q9ULG1 1556 aaPredicted RBP0.21□□□□□ -2.38
SYPL1-203ENST00000460770 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
SYPL1-203ENST00000460770 LINC00308Q8TCZ7 52 aa0.21□□□□□ -2.38
SYPL1-203ENST00000460770 DSPP15924 2871 aaKnown RBP0.21□□□□□ -2.38
SYPL1-203ENST00000460770 BSNQ9UPA5 3926 aa0.21□□□□□ -2.38
SYPL1-203ENST00000460770 NHSQ6T4R5 1651 aa0.21□□□□□ -2.38
SYPL1-203ENST00000460770 ACACAQ13085 2346 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 THOC2Q8NI27 1593 aaKnown RBP0.2□□□□□ -2.38
SYPL1-203ENST00000460770 FAT2Q9NYQ8 4349 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 SMIM27A0A1W2PRY6 76 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 IGIPA6NJ69 53 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 PLNP26678 52 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 S4R3F8 94 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 AKAP13Q12802 2813 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 PKD1L1Q8TDX9 2849 aa0.2□□□□□ -2.38
SYPL1-203ENST00000460770 EIF2AK4Q9P2K8 1649 aaKnown RBP0.2□□□□□ -2.38
SYPL1-203ENST00000460770 KIAA0586Q9BVV6 1533 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 C4AP0C0L4 1744 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 C4BP0C0L5 1744 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 MTORP42345 2549 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 CEP290O15078 2479 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 WIZO95785 1651 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 PRXQ9BXM0 1461 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 H3BNG1 76 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 RPS27P42677 84 aaKnown RBP0.19□□□□□ -2.38
SYPL1-203ENST00000460770 RPS27LQ71UM5 84 aaKnown RBP0.19□□□□□ -2.38
SYPL1-203ENST00000460770 NOP10Q9NPE3 64 aaKnown RBP0.19□□□□□ -2.38
SYPL1-203ENST00000460770 MAST4O15021 2626 aa0.19□□□□□ -2.38
SYPL1-203ENST00000460770 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
SYPL1-203ENST00000460770 PRKDCP78527 4128 aaKnown RBP0.19□□□□□ -2.38
SYPL1-203ENST00000460770 TJP1Q07157 1748 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 ITSN1Q15811 1721 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 NRAPQ86VF7 1730 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 FLNBO75369 2602 aaKnown RBP0.18□□□□□ -2.38
SYPL1-203ENST00000460770 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 KMT2AQ03164 3969 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 CACNA1AO00555 2505 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 CCDC180Q9P1Z9 1646 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 C9orf92A6NGG3 77 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 SPRR2DP22532 72 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 CMC2Q9NRP2 79 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 PLXNC1O60486 1568 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 ABCA10Q8WWZ4 1543 aa0.18□□□□□ -2.38
SYPL1-203ENST00000460770 FLNAP21333 2647 aaKnown RBP0.17□□□□□ -2.38
SYPL1-203ENST00000460770 EPG5Q9HCE0 2579 aa0.17□□□□□ -2.38
SYPL1-203ENST00000460770 HRNRQ86YZ3 2850 aaPredicted RBP0.17□□□□□ -2.38
SYPL1-203ENST00000460770 SNRPGP15A8MWD9 76 aa0.17□□□□□ -2.38
SYPL1-203ENST00000460770 KAAG1Q9UBP8 84 aa0.17□□□□□ -2.38
SYPL1-203ENST00000460770 FAM186AA6NE01 2351 aa0.17□□□□□ -2.38
SYPL1-203ENST00000460770 ABCA6Q8N139 1617 aa0.16□□□□□ -2.38
SYPL1-203ENST00000460770 TNXBP22105 4242 aa0.16□□□□□ -2.38
SYPL1-203ENST00000460770 UGGT1Q9NYU2 1555 aa0.16□□□□□ -2.38
SYPL1-203ENST00000460770 LRP1Q07954 4544 aaKnown RBP0.16□□□□□ -2.38
SYPL1-203ENST00000460770 HUWE1Q7Z6Z7 4374 aaKnown RBP0.16□□□□□ -2.38
SYPL1-203ENST00000460770 WFDC10BQ8IUB3 73 aa0.16□□□□□ -2.38
SYPL1-203ENST00000460770 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
SYPL1-203ENST00000460770 PARP4Q9UKK3 1724 aaKnown RBP0.16□□□□□ -2.38
SYPL1-203ENST00000460770 MAP1AP78559 2803 aaPredicted RBP0.15□□□□□ -2.38
SYPL1-203ENST00000460770 ALMS1Q8TCU4 4167 aa0.15□□□□□ -2.38
SYPL1-203ENST00000460770 DCHS2Q6V1P9 2916 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 LRRK2Q5S007 2527 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 IGLV5-48A0A075B6I7 105 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 TNRC18O15417 2968 aaPredicted RBP0.15□□□□□ -2.39
SYPL1-203ENST00000460770 SPRR2BP35325 72 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 RIF1Q5UIP0 2472 aaKnown RBP0.15□□□□□ -2.39
SYPL1-203ENST00000460770 CCDC168Q8NDH2 2452 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 LYSTQ99698 3801 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 TIAM1Q13009 1591 aa0.15□□□□□ -2.39
SYPL1-203ENST00000460770 PDZD2O15018 2839 aa0.14□□□□□ -2.39
SYPL1-203ENST00000460770 SONP18583 2426 aaKnown RBP0.14□□□□□ -2.39
SYPL1-203ENST00000460770 KALRNO60229 2985 aa0.14□□□□□ -2.39
SYPL1-203ENST00000460770 FLNCQ14315 2725 aa0.14□□□□□ -2.39
SYPL1-203ENST00000460770 MMP24-AS1A0A0U1RRL7 71 aa0.14□□□□□ -2.39
SYPL1-203ENST00000460770 SETD2Q9BYW2 2564 aaPredicted RBP0.14□□□□□ -2.39
SYPL1-203ENST00000460770 SPTBN4Q9H254 2564 aa0.14□□□□□ -2.39
SYPL1-203ENST00000460770 TENM2Q9NT68 2774 aa0.14□□□□□ -2.39
SYPL1-203ENST00000460770 C3P01024 1663 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 2077.5 ms