RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 ZNF861PO60384 105 aa3.74□□□□□ -1.81
VRK2-206ENST00000435505 IGLV1-51P01701 117 aa3.74□□□□□ -1.81
VRK2-206ENST00000435505 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
VRK2-206ENST00000435505 HRES1P13985 223 aa3.73□□□□□ -1.81
VRK2-206ENST00000435505 C4orf3Q8WVX3 66 aa3.73□□□□□ -1.81
VRK2-206ENST00000435505 NBEAL2Q6ZNJ1 2754 aa3.73□□□□□ -1.81
VRK2-206ENST00000435505 Q6ZR54 194 aa3.73□□□□□ -1.81
VRK2-206ENST00000435505 UTP20O75691 2785 aaKnown RBP3.72□□□□□ -1.81
VRK2-206ENST00000435505 MSMBP08118 114 aa3.72□□□□□ -1.81
VRK2-206ENST00000435505 ASB16-AS1Q495Z4 193 aa3.72□□□□□ -1.81
VRK2-206ENST00000435505 Q6ZRX8 168 aa3.72□□□□□ -1.81
VRK2-206ENST00000435505 PRO0255Q9UI72 69 aa3.72□□□□□ -1.81
VRK2-206ENST00000435505 A0A087WSZ3 146 aa3.71□□□□□ -1.82
VRK2-206ENST00000435505 FN1P02751 2386 aaKnown RBP3.71□□□□□ -1.82
VRK2-206ENST00000435505 MXRA5Q9NR99 2828 aa3.71□□□□□ -1.82
VRK2-206ENST00000435505 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
VRK2-206ENST00000435505 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
VRK2-206ENST00000435505 GCN1Q92616 2671 aaKnown RBP3.7□□□□□ -1.82
VRK2-206ENST00000435505 PTPN13Q12923 2485 aa3.7□□□□□ -1.82
VRK2-206ENST00000435505 PANO1I0J062 215 aa3.7□□□□□ -1.82
VRK2-206ENST00000435505 ZANQ9Y493 2812 aa3.7□□□□□ -1.82
VRK2-206ENST00000435505 PRR34Q9NV39 138 aa3.7□□□□□ -1.82
VRK2-206ENST00000435505 FBN2P35556 2912 aa3.69□□□□□ -1.82
VRK2-206ENST00000435505 IGF2RP11717 2491 aa3.68□□□□□ -1.82
VRK2-206ENST00000435505 C1orf134Q5TEV5 83 aa3.68□□□□□ -1.82
VRK2-206ENST00000435505 ALMS1Q8TCU4 4167 aa3.68□□□□□ -1.82
VRK2-206ENST00000435505 MYO9AB2RTY4 2548 aa3.68□□□□□ -1.82
VRK2-206ENST00000435505 OTOGLQ3ZCN5 2332 aa3.68□□□□□ -1.82
VRK2-206ENST00000435505 SPTBN4Q9H254 2564 aa3.68□□□□□ -1.82
VRK2-206ENST00000435505 MMP24-AS1A0A0U1RRL7 71 aa3.68□□□□□ -1.82
VRK2-206ENST00000435505 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 Q5W150 140 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 ZFYVE26Q68DK2 2539 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 BDP1A6H8Y1 2624 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 CEP295Q9C0D2 2601 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 CFAP46Q8IYW2 2715 aa3.66□□□□□ -1.82
VRK2-206ENST00000435505 DEFB4AO15263 64 aa3.65□□□□□ -1.82
VRK2-206ENST00000435505 SPRR1AP35321 89 aa3.65□□□□□ -1.82
VRK2-206ENST00000435505 LELP1Q5T871 98 aa3.65□□□□□ -1.82
VRK2-206ENST00000435505 TENM2Q9NT68 2774 aa3.65□□□□□ -1.83
VRK2-206ENST00000435505 HIVEP3Q5T1R4 2406 aa3.65□□□□□ -1.83
VRK2-206ENST00000435505 KRTAP26-1Q6PEX3 210 aa3.65□□□□□ -1.83
VRK2-206ENST00000435505 SPATA8Q6RVD6 105 aa3.65□□□□□ -1.83
VRK2-206ENST00000435505 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
VRK2-206ENST00000435505 CCL19Q99731 98 aa3.64□□□□□ -1.83
VRK2-206ENST00000435505 USP9XQ93008 2570 aaPredicted RBP3.64□□□□□ -1.83
VRK2-206ENST00000435505 KRTAP17-1Q9BYP8 105 aa3.64□□□□□ -1.83
VRK2-206ENST00000435505 UBR5O95071 2799 aaPredicted RBP3.64□□□□□ -1.83
VRK2-206ENST00000435505 DEFB131BA0A096LNP1 70 aa3.63□□□□□ -1.83
VRK2-206ENST00000435505 MAPK1IP1LQ8NDC0 245 aa3.63□□□□□ -1.83
VRK2-206ENST00000435505 LINC00472Q9H8W2 130 aa3.63□□□□□ -1.83
VRK2-206ENST00000435505 MUC6Q6W4X9 2439 aa3.62□□□□□ -1.83
VRK2-206ENST00000435505 HTN3P15516 51 aa3.62□□□□□ -1.83
VRK2-206ENST00000435505 ROMO1P60602 79 aa3.62□□□□□ -1.83
VRK2-206ENST00000435505 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
VRK2-206ENST00000435505 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
VRK2-206ENST00000435505 ZNF292O60281 2723 aa3.62□□□□□ -1.83
VRK2-206ENST00000435505 SONP18583 2426 aaKnown RBP3.62□□□□□ -1.83
VRK2-206ENST00000435505 F8P00451 2351 aa3.62□□□□□ -1.83
VRK2-206ENST00000435505 CSMD3Q7Z407 3707 aa3.61□□□□□ -1.83
VRK2-206ENST00000435505 A0A1B0GU69 56 aa3.61□□□□□ -1.83
VRK2-206ENST00000435505 DNAH10OSP0CZ25 163 aa3.6□□□□□ -1.83
VRK2-206ENST00000435505 TP53AIP1Q9HCN2 124 aa3.6□□□□□ -1.83
VRK2-206ENST00000435505 PRLHP81277 87 aa3.59□□□□□ -1.84
VRK2-206ENST00000435505 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
VRK2-206ENST00000435505 ANK3Q12955 4377 aaKnown RBP3.58□□□□□ -1.84
VRK2-206ENST00000435505 SETD2Q9BYW2 2564 aaPredicted RBP3.58□□□□□ -1.84
VRK2-206ENST00000435505 K7EIL1 84 aa3.58□□□□□ -1.84
VRK2-206ENST00000435505 UQCR11O14957 56 aa3.58□□□□□ -1.84
VRK2-206ENST00000435505 P0C880 135 aa3.58□□□□□ -1.84
VRK2-206ENST00000435505 DEFB135Q30KP9 77 aa3.58□□□□□ -1.84
VRK2-206ENST00000435505 USP9YO00507 2555 aaPredicted RBP3.57□□□□□ -1.84
VRK2-206ENST00000435505 LRRK2Q5S007 2527 aa3.57□□□□□ -1.84
VRK2-206ENST00000435505 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
VRK2-206ENST00000435505 CENPEQ02224 2701 aa3.56□□□□□ -1.84
VRK2-206ENST00000435505 SRRM2Q9UQ35 2752 aaKnown RBP3.56□□□□□ -1.84
VRK2-206ENST00000435505 UNC79Q9P2D8 2635 aa3.56□□□□□ -1.84
VRK2-206ENST00000435505 ACYP2P14621 99 aa3.55□□□□□ -1.84
VRK2-206ENST00000435505 Q96NJ1 140 aa3.55□□□□□ -1.84
VRK2-206ENST00000435505 BAHCC1Q9P281 2608 aa3.55□□□□□ -1.84
VRK2-206ENST00000435505 A0A096LNI7 61 aa3.54□□□□□ -1.84
VRK2-206ENST00000435505 IGLV7-43P04211 117 aa3.54□□□□□ -1.84
VRK2-206ENST00000435505 CHD8Q9HCK8 2581 aa3.54□□□□□ -1.84
VRK2-206ENST00000435505 NAV2Q8IVL1 2488 aa3.54□□□□□ -1.84
VRK2-206ENST00000435505 MTORP42345 2549 aa3.54□□□□□ -1.84
VRK2-206ENST00000435505 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
VRK2-206ENST00000435505 TRRAPQ9Y4A5 3859 aa3.53□□□□□ -1.84
VRK2-206ENST00000435505 POLQO75417 2590 aa3.53□□□□□ -1.84
VRK2-206ENST00000435505 HIVEP1P15822 2718 aa3.53□□□□□ -1.84
VRK2-206ENST00000435505 MRPL34Q9BQ48 92 aaKnown RBP3.52□□□□□ -1.85
VRK2-206ENST00000435505 KRTAP13-3Q3SY46 172 aa3.52□□□□□ -1.85
VRK2-206ENST00000435505 LINC00483Q53H64 154 aa3.52□□□□□ -1.85
VRK2-206ENST00000435505 ZFHX2Q9C0A1 2572 aaPredicted RBP3.52□□□□□ -1.85
VRK2-206ENST00000435505 PKD1L2Q7Z442 2459 aa3.5□□□□□ -1.85
VRK2-206ENST00000435505 PKD1L1Q8TDX9 2849 aa3.5□□□□□ -1.85
VRK2-206ENST00000435505 SPART-AS1P0CW21 52 aa3.5□□□□□ -1.85
VRK2-206ENST00000435505 DNAH1Q9P2D7 4330 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms