RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 RP1L1Q8IWN7 2480 aaPredicted RBP1.16□□□□□ -2.22
CTDSPL-203ENST00000416688 PKD1L2Q7Z442 2459 aa1.15□□□□□ -2.22
CTDSPL-203ENST00000416688 PRLHP81277 87 aa1.15□□□□□ -2.23
CTDSPL-203ENST00000416688 LINC01590Q5TEZ4 76 aa1.15□□□□□ -2.23
CTDSPL-203ENST00000416688 DSPP15924 2871 aaKnown RBP1.15□□□□□ -2.23
CTDSPL-203ENST00000416688 SPTBN1Q01082 2364 aaKnown RBP1.14□□□□□ -2.23
CTDSPL-203ENST00000416688 DEFB106AQ8N104 65 aa1.14□□□□□ -2.23
CTDSPL-203ENST00000416688 LCE3DQ9BYE3 92 aa1.14□□□□□ -2.23
CTDSPL-203ENST00000416688 TTTY10Q9BZA0 68 aa1.14□□□□□ -2.23
CTDSPL-203ENST00000416688 S4R3F8 94 aa1.14□□□□□ -2.23
CTDSPL-203ENST00000416688 MEGF8Q7Z7M0 2845 aa1.14□□□□□ -2.23
CTDSPL-203ENST00000416688 CHD9Q3L8U1 2897 aa1.13□□□□□ -2.23
CTDSPL-203ENST00000416688 IGF2RP11717 2491 aa1.12□□□□□ -2.23
CTDSPL-203ENST00000416688 ZNF292O60281 2723 aa1.12□□□□□ -2.23
CTDSPL-203ENST00000416688 CACNA1HO95180 2353 aa1.11□□□□□ -2.23
CTDSPL-203ENST00000416688 PRCDQ00LT1 54 aa1.11□□□□□ -2.23
CTDSPL-203ENST00000416688 HIVEP2P31629 2446 aa1.11□□□□□ -2.23
CTDSPL-203ENST00000416688 PCNX1Q96RV3 2341 aa1.11□□□□□ -2.23
CTDSPL-203ENST00000416688 KRTAP12-3P60328 96 aa1.1□□□□□ -2.23
CTDSPL-203ENST00000416688 KRTAP4-3Q9BYR4 195 aa1.1□□□□□ -2.23
CTDSPL-203ENST00000416688 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
CTDSPL-203ENST00000416688 CELSR2Q9HCU4 2923 aa1.09□□□□□ -2.23
CTDSPL-203ENST00000416688 M0QY20 66 aa1.09□□□□□ -2.23
CTDSPL-203ENST00000416688 ABCA12Q86UK0 2595 aa1.08□□□□□ -2.24
CTDSPL-203ENST00000416688 A8MTW9 85 aa1.08□□□□□ -2.24
CTDSPL-203ENST00000416688 LEAP2Q969E1 77 aa1.08□□□□□ -2.24
CTDSPL-203ENST00000416688 MUC6Q6W4X9 2439 aa1.08□□□□□ -2.24
CTDSPL-203ENST00000416688 GVINP1Q7Z2Y8 2422 aa1.08□□□□□ -2.24
CTDSPL-203ENST00000416688 TTC28Q96AY4 2481 aa1.07□□□□□ -2.24
CTDSPL-203ENST00000416688 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
CTDSPL-203ENST00000416688 CLPSL2Q6UWE3 100 aa1.07□□□□□ -2.24
CTDSPL-203ENST00000416688 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
CTDSPL-203ENST00000416688 POLQO75417 2590 aa1.07□□□□□ -2.24
CTDSPL-203ENST00000416688 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
CTDSPL-203ENST00000416688 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
CTDSPL-203ENST00000416688 CSPG4Q6UVK1 2322 aa1.06□□□□□ -2.24
CTDSPL-203ENST00000416688 H0YGG7 62 aa1.06□□□□□ -2.24
CTDSPL-203ENST00000416688 H3BSH0 61 aa1.06□□□□□ -2.24
CTDSPL-203ENST00000416688 LCE3AQ5TA76 89 aa1.05□□□□□ -2.24
CTDSPL-203ENST00000416688 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
CTDSPL-203ENST00000416688 F8P00451 2351 aa1.05□□□□□ -2.24
CTDSPL-203ENST00000416688 NOTCH2Q04721 2471 aa1.04□□□□□ -2.24
CTDSPL-203ENST00000416688 SPINK1P00995 79 aa1.04□□□□□ -2.24
CTDSPL-203ENST00000416688 OBSCNQ5VST9 7968 aa1.04□□□□□ -2.24
CTDSPL-203ENST00000416688 USP24Q9UPU5 2620 aa1.03□□□□□ -2.24
CTDSPL-203ENST00000416688 GPR98Q8WXG9 6306 aa1.02□□□□□ -2.25
CTDSPL-203ENST00000416688 KRTAP5-5Q701N2 237 aaPredicted RBP1.01□□□□□ -2.25
CTDSPL-203ENST00000416688 AKAP13Q12802 2813 aa1.01□□□□□ -2.25
CTDSPL-203ENST00000416688 HECTD1Q9ULT8 2610 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 K7EIM0 57 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 M0QZ58 72 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 DEFB135Q30KP9 77 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 CSMD3Q7Z407 3707 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 CEP290O15078 2479 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 AKAP6Q13023 2319 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 PCLOQ9Y6V0 5065 aa1□□□□□ -2.25
CTDSPL-203ENST00000416688 HELZ2Q9BYK8 2649 aaKnown RBP0.99□□□□□ -2.25
CTDSPL-203ENST00000416688 TMEM167AQ8TBQ9 72 aa0.99□□□□□ -2.25
CTDSPL-203ENST00000416688 TENM4Q6N022 2769 aa0.99□□□□□ -2.25
CTDSPL-203ENST00000416688 SRRM2Q9UQ35 2752 aaKnown RBP0.99□□□□□ -2.25
CTDSPL-203ENST00000416688 CHD7Q9P2D1 2997 aa0.98□□□□□ -2.25
CTDSPL-203ENST00000416688 SPTA1P02549 2419 aa0.98□□□□□ -2.25
CTDSPL-203ENST00000416688 ATRQ13535 2644 aa0.98□□□□□ -2.25
CTDSPL-203ENST00000416688 SPINK6Q6UWN8 80 aa0.97□□□□□ -2.25
CTDSPL-203ENST00000416688 PIEZO1Q92508 2521 aa0.96□□□□□ -2.26
CTDSPL-203ENST00000416688 COL6A3P12111 3177 aa0.96□□□□□ -2.26
CTDSPL-203ENST00000416688 BDP1A6H8Y1 2624 aa0.96□□□□□ -2.26
CTDSPL-203ENST00000416688 M0R2T5 61 aa0.96□□□□□ -2.26
CTDSPL-203ENST00000416688 VWFP04275 2813 aa0.96□□□□□ -2.26
CTDSPL-203ENST00000416688 KIAA1109Q2LD37 5005 aa0.96□□□□□ -2.26
CTDSPL-203ENST00000416688 CELSR1Q9NYQ6 3014 aa0.95□□□□□ -2.26
CTDSPL-203ENST00000416688 UBR5O95071 2799 aaPredicted RBP0.95□□□□□ -2.26
CTDSPL-203ENST00000416688 ANK2Q01484 3957 aa0.95□□□□□ -2.26
CTDSPL-203ENST00000416688 CREBBPQ92793 2442 aa0.95□□□□□ -2.26
CTDSPL-203ENST00000416688 SRCAPQ6ZRS2 3230 aa0.94□□□□□ -2.26
CTDSPL-203ENST00000416688 OTOGQ6ZRI0 2925 aa0.94□□□□□ -2.26
CTDSPL-203ENST00000416688 DEFB104AQ8WTQ1 72 aa0.94□□□□□ -2.26
CTDSPL-203ENST00000416688 MUC2Q02817 5179 aa0.94□□□□□ -2.26
CTDSPL-203ENST00000416688 CHD6Q8TD26 2715 aa0.94□□□□□ -2.26
CTDSPL-203ENST00000416688 LCE1CQ5T751 118 aa0.93□□□□□ -2.26
CTDSPL-203ENST00000416688 LCE1BQ5T7P3 118 aa0.93□□□□□ -2.26
CTDSPL-203ENST00000416688 APCP25054 2843 aa0.93□□□□□ -2.26
CTDSPL-203ENST00000416688 TNRC18O15417 2968 aaPredicted RBP0.92□□□□□ -2.26
CTDSPL-203ENST00000416688 C9orf92A6NGG3 77 aa0.92□□□□□ -2.26
CTDSPL-203ENST00000416688 FRYQ5TBA9 3013 aa0.91□□□□□ -2.26
CTDSPL-203ENST00000416688 TNP1P09430 55 aa0.91□□□□□ -2.26
CTDSPL-203ENST00000416688 CHD8Q9HCK8 2581 aa0.91□□□□□ -2.26
CTDSPL-203ENST00000416688 RPL39P5Q59GN2 51 aa0.9□□□□□ -2.27
CTDSPL-203ENST00000416688 SMR3AQ99954 134 aa0.9□□□□□ -2.27
CTDSPL-203ENST00000416688 EP300Q09472 2414 aaPredicted RBP0.9□□□□□ -2.27
CTDSPL-203ENST00000416688 U3KQA8 63 aa0.89□□□□□ -2.27
CTDSPL-203ENST00000416688 CRYBG3Q68DQ2 2970 aa0.89□□□□□ -2.27
CTDSPL-203ENST00000416688 MGAQ8IWI9 3026 aa0.89□□□□□ -2.27
CTDSPL-203ENST00000416688 NCOR1O75376 2440 aa0.88□□□□□ -2.27
CTDSPL-203ENST00000416688 FBN2P35556 2912 aa0.88□□□□□ -2.27
CTDSPL-203ENST00000416688 NBASA2RRP1 2371 aa0.88□□□□□ -2.27
CTDSPL-203ENST00000416688 WNK1Q9H4A3 2382 aa0.88□□□□□ -2.27
CTDSPL-203ENST00000416688 NF1P21359 2839 aa0.87□□□□□ -2.27
CTDSPL-203ENST00000416688 MAP1BP46821 2468 aaKnown RBP0.87□□□□□ -2.27
CTDSPL-203ENST00000416688 NAV2Q8IVL1 2488 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms