RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 SPINK1P00995 79 aa2.26□□□□□ -2.05
SEMA3C-202ENST00000411788 DEFB123Q8N688 67 aa2.26□□□□□ -2.05
SEMA3C-202ENST00000411788 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.25□□□□□ -2.05
SEMA3C-202ENST00000411788 A0A096LPF7 62 aa2.25□□□□□ -2.05
SEMA3C-202ENST00000411788 CACNA1EQ15878 2313 aa2.24□□□□□ -2.05
SEMA3C-202ENST00000411788 LCE3CQ5T5A8 94 aa2.24□□□□□ -2.05
SEMA3C-202ENST00000411788 KRTAP12-2P59991 146 aa2.23□□□□□ -2.05
SEMA3C-202ENST00000411788 ZFHX2Q9C0A1 2572 aaPredicted RBP2.23□□□□□ -2.05
SEMA3C-202ENST00000411788 H3BNG1 76 aa2.22□□□□□ -2.05
SEMA3C-202ENST00000411788 SPTBN2O15020 2390 aa2.22□□□□□ -2.05
SEMA3C-202ENST00000411788 CHD7Q9P2D1 2997 aa2.22□□□□□ -2.05
SEMA3C-202ENST00000411788 KRTAP1-4P0C5Y4 121 aa2.21□□□□□ -2.06
SEMA3C-202ENST00000411788 TPRP12270 2363 aaKnown RBP2.21□□□□□ -2.06
SEMA3C-202ENST00000411788 NOTCH2Q04721 2471 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 ZZEF1O43149 2961 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 UTRNP46939 3433 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 LINC01556Q5JQF7 62 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 S4R3F8 94 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 CFAP54Q96N23 3096 aa2.2□□□□□ -2.06
SEMA3C-202ENST00000411788 TRANK1O15050 2925 aa2.19□□□□□ -2.06
SEMA3C-202ENST00000411788 PKDREJQ9NTG1 2253 aa2.19□□□□□ -2.06
SEMA3C-202ENST00000411788 AKAP6Q13023 2319 aa2.18□□□□□ -2.06
SEMA3C-202ENST00000411788 SPART-AS1P0CW21 52 aa2.18□□□□□ -2.06
SEMA3C-202ENST00000411788 APLNQ9ULZ1 77 aa2.18□□□□□ -2.06
SEMA3C-202ENST00000411788 HTTP42858 3142 aa2.18□□□□□ -2.06
SEMA3C-202ENST00000411788 ZDBF2Q9HCK1 2354 aa2.17□□□□□ -2.06
SEMA3C-202ENST00000411788 A0A096LNI7 61 aa2.17□□□□□ -2.06
SEMA3C-202ENST00000411788 FAM186AA6NE01 2351 aa2.17□□□□□ -2.06
SEMA3C-202ENST00000411788 IGF2RP11717 2491 aa2.17□□□□□ -2.06
SEMA3C-202ENST00000411788 VPS13AQ96RL7 3174 aa2.16□□□□□ -2.06
SEMA3C-202ENST00000411788 ACACAQ13085 2346 aa2.16□□□□□ -2.06
SEMA3C-202ENST00000411788 DEFB124Q8NES8 71 aa2.16□□□□□ -2.06
SEMA3C-202ENST00000411788 SZT2Q5T011 3432 aa2.16□□□□□ -2.06
SEMA3C-202ENST00000411788 CEP250Q9BV73 2442 aa2.16□□□□□ -2.06
SEMA3C-202ENST00000411788 PCNX1Q96RV3 2341 aa2.16□□□□□ -2.06
SEMA3C-202ENST00000411788 SPINK6Q6UWN8 80 aa2.15□□□□□ -2.07
SEMA3C-202ENST00000411788 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
SEMA3C-202ENST00000411788 CHD9Q3L8U1 2897 aa2.15□□□□□ -2.07
SEMA3C-202ENST00000411788 TENM2Q9NT68 2774 aa2.15□□□□□ -2.07
SEMA3C-202ENST00000411788 FLG2Q5D862 2391 aaPredicted RBP2.14□□□□□ -2.07
SEMA3C-202ENST00000411788 TNRC18O15417 2968 aaPredicted RBP2.14□□□□□ -2.07
SEMA3C-202ENST00000411788 MAP1BP46821 2468 aaKnown RBP2.13□□□□□ -2.07
SEMA3C-202ENST00000411788 CFAP47Q6ZTR5 3102 aa2.13□□□□□ -2.07
SEMA3C-202ENST00000411788 UNC80Q8N2C7 3258 aa2.13□□□□□ -2.07
SEMA3C-202ENST00000411788 GPR179Q6PRD1 2367 aa2.13□□□□□ -2.07
SEMA3C-202ENST00000411788 C5orf42Q9H799 3197 aa2.12□□□□□ -2.07
SEMA3C-202ENST00000411788 A0A0D9SG42 100 aa2.12□□□□□ -2.07
SEMA3C-202ENST00000411788 RANBP2P49792 3224 aaKnown RBP2.12□□□□□ -2.07
SEMA3C-202ENST00000411788 NBEAQ8NFP9 2946 aa2.11□□□□□ -2.07
SEMA3C-202ENST00000411788 MKI67P46013 3256 aaKnown RBP2.11□□□□□ -2.07
SEMA3C-202ENST00000411788 APC2O95996 2303 aa2.11□□□□□ -2.07
SEMA3C-202ENST00000411788 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
SEMA3C-202ENST00000411788 HTN3P15516 51 aa2.11□□□□□ -2.07
SEMA3C-202ENST00000411788 SPTBN5Q9NRC6 3674 aaKnown RBP2.11□□□□□ -2.07
SEMA3C-202ENST00000411788 BRCA2P51587 3418 aa2.11□□□□□ -2.07
SEMA3C-202ENST00000411788 KRTAP10-8P60410 259 aa2.1□□□□□ -2.07
SEMA3C-202ENST00000411788 SPTA1P02549 2419 aa2.1□□□□□ -2.07
SEMA3C-202ENST00000411788 DNAH14Q0VDD8 3507 aa2.09□□□□□ -2.07
SEMA3C-202ENST00000411788 PRUNE2Q8WUY3 3088 aa2.09□□□□□ -2.07
SEMA3C-202ENST00000411788 WDFY4Q6ZS81 3184 aa2.09□□□□□ -2.07
SEMA3C-202ENST00000411788 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
SEMA3C-202ENST00000411788 CHD6Q8TD26 2715 aa2.09□□□□□ -2.08
SEMA3C-202ENST00000411788 LAMA2P24043 3122 aaKnown RBP2.08□□□□□ -2.08
SEMA3C-202ENST00000411788 SPTBN4Q9H254 2564 aa2.08□□□□□ -2.08
SEMA3C-202ENST00000411788 PTPRZ1P23471 2315 aaPredicted RBP2.08□□□□□ -2.08
SEMA3C-202ENST00000411788 FRYLO94915 3013 aa2.08□□□□□ -2.08
SEMA3C-202ENST00000411788 OTOGQ6ZRI0 2925 aa2.07□□□□□ -2.08
SEMA3C-202ENST00000411788 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
SEMA3C-202ENST00000411788 ASH1LQ9NR48 2969 aaKnown RBP2.07□□□□□ -2.08
SEMA3C-202ENST00000411788 DCHS1Q96JQ0 3298 aa2.07□□□□□ -2.08
SEMA3C-202ENST00000411788 XIRP2A4UGR9 3374 aa2.07□□□□□ -2.08
SEMA3C-202ENST00000411788 EP300Q09472 2414 aaPredicted RBP2.07□□□□□ -2.08
SEMA3C-202ENST00000411788 LAMA1P25391 3075 aa2.06□□□□□ -2.08
SEMA3C-202ENST00000411788 M0QZ58 72 aa2.06□□□□□ -2.08
SEMA3C-202ENST00000411788 Q5VSD8 79 aa2.06□□□□□ -2.08
SEMA3C-202ENST00000411788 PIEZO2Q9H5I5 2752 aa2.06□□□□□ -2.08
SEMA3C-202ENST00000411788 CELSR2Q9HCU4 2923 aa2.06□□□□□ -2.08
SEMA3C-202ENST00000411788 DEFB135Q30KP9 77 aa2.05□□□□□ -2.08
SEMA3C-202ENST00000411788 FRYQ5TBA9 3013 aa2.05□□□□□ -2.08
SEMA3C-202ENST00000411788 HIVEP2P31629 2446 aa2.04□□□□□ -2.08
SEMA3C-202ENST00000411788 KALRNO60229 2985 aa2.04□□□□□ -2.08
SEMA3C-202ENST00000411788 ANKHD1Q8IWZ3 2542 aaKnown RBP2.03□□□□□ -2.08
SEMA3C-202ENST00000411788 BOD1L1Q8NFC6 3051 aa2.03□□□□□ -2.08
SEMA3C-202ENST00000411788 AKAP9Q99996 3911 aa2.03□□□□□ -2.08
SEMA3C-202ENST00000411788 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
SEMA3C-202ENST00000411788 ROS1P08922 2347 aa2.03□□□□□ -2.08
SEMA3C-202ENST00000411788 TRIOO75962 3097 aa2.02□□□□□ -2.09
SEMA3C-202ENST00000411788 USP34Q70CQ2 3546 aa2.02□□□□□ -2.09
SEMA3C-202ENST00000411788 DEFB4AO15263 64 aa2.02□□□□□ -2.09
SEMA3C-202ENST00000411788 FN1P02751 2386 aaKnown RBP2.02□□□□□ -2.09
SEMA3C-202ENST00000411788 REV3LO60673 3130 aa2.02□□□□□ -2.09
SEMA3C-202ENST00000411788 RP1L1Q8IWN7 2480 aaPredicted RBP2.01□□□□□ -2.09
SEMA3C-202ENST00000411788 VCANP13611 3396 aa2.01□□□□□ -2.09
SEMA3C-202ENST00000411788 CACNA1HO95180 2353 aa2.01□□□□□ -2.09
SEMA3C-202ENST00000411788 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
SEMA3C-202ENST00000411788 LAMA3Q16787 3333 aa2.01□□□□□ -2.09
SEMA3C-202ENST00000411788 SPEGQ15772 3267 aa2□□□□□ -2.09
SEMA3C-202ENST00000411788 PRRC2CQ9Y520 2896 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms