RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 FP248Q71RG6 208 aaPredicted RBP13.35□□□□□ -0.27
R3HCC1-202ENST00000411463 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.33□□□□□ -0.28
R3HCC1-202ENST00000411463 H0YGX0 51 aa13.32□□□□□ -0.28
R3HCC1-202ENST00000411463 TPRXLQ17RH7 258 aa13.32□□□□□ -0.28
R3HCC1-202ENST00000411463 HRCT1Q6UXD1 115 aa13.32□□□□□ -0.28
R3HCC1-202ENST00000411463 SNCGO76070 127 aa13.29□□□□□ -0.28
R3HCC1-202ENST00000411463 CD164Q04900 197 aa13.29□□□□□ -0.28
R3HCC1-202ENST00000411463 F8WEM9 126 aa13.28□□□□□ -0.28
R3HCC1-202ENST00000411463 LIMD2Q9BT23 127 aa13.27□□□□□ -0.29
R3HCC1-202ENST00000411463 M0R143 59 aa13.26□□□□□ -0.29
R3HCC1-202ENST00000411463 PPDPFLQ8WWR9 84 aa13.25□□□□□ -0.29
R3HCC1-202ENST00000411463 FAM218AQ96MZ4 157 aa13.25□□□□□ -0.29
R3HCC1-202ENST00000411463 CDIP1Q9H305 208 aa13.25□□□□□ -0.29
R3HCC1-202ENST00000411463 A0A0G2JQZ4 141 aa13.24□□□□□ -0.29
R3HCC1-202ENST00000411463 K7ERJ3 54 aa13.24□□□□□ -0.29
R3HCC1-202ENST00000411463 RNF213Q63HN8 5207 aa13.24□□□□□ -0.29
R3HCC1-202ENST00000411463 SNHG12Q9BXW3 62 aa13.23□□□□□ -0.29
R3HCC1-202ENST00000411463 TRIAP1O43715 76 aa13.23□□□□□ -0.29
R3HCC1-202ENST00000411463 OCIAD2Q56VL3 154 aa13.21□□□□□ -0.3
R3HCC1-202ENST00000411463 A0A1B0GX51 115 aa13.19□□□□□ -0.3
R3HCC1-202ENST00000411463 IGLV8-61A0A075B6I0 122 aa13.18□□□□□ -0.3
R3HCC1-202ENST00000411463 PSMB2P49721 201 aa13.18□□□□□ -0.3
R3HCC1-202ENST00000411463 KRTAP13-3Q3SY46 172 aa13.18□□□□□ -0.3
R3HCC1-202ENST00000411463 Q6JHZ5 121 aa13.17□□□□□ -0.3
R3HCC1-202ENST00000411463 BATFQ16520 125 aa13.16□□□□□ -0.3
R3HCC1-202ENST00000411463 Q5XG85 94 aa13.16□□□□□ -0.3
R3HCC1-202ENST00000411463 COX6CP09669 75 aa13.14□□□□□ -0.31
R3HCC1-202ENST00000411463 CLEC2BQ92478 149 aa13.14□□□□□ -0.31
R3HCC1-202ENST00000411463 GHRHP01286 108 aa13.13□□□□□ -0.31
R3HCC1-202ENST00000411463 IGFL1Q6UW32 110 aa13.12□□□□□ -0.31
R3HCC1-202ENST00000411463 COL5A1-AS1Q5SY13 56 aa13.1□□□□□ -0.31
R3HCC1-202ENST00000411463 H3BUT2 72 aa13.09□□□□□ -0.31
R3HCC1-202ENST00000411463 NDUFV3P56181 108 aaKnown RBP13.09□□□□□ -0.31
R3HCC1-202ENST00000411463 DNAL4O96015 105 aa13.07□□□□□ -0.32
R3HCC1-202ENST00000411463 FABP2P12104 132 aa13.07□□□□□ -0.32
R3HCC1-202ENST00000411463 TCL1BO95988 128 aa13.06□□□□□ -0.32
R3HCC1-202ENST00000411463 C1orf195Q5TG92 126 aa13.05□□□□□ -0.32
R3HCC1-202ENST00000411463 TRBV7-7A0A0K0K1E9 115 aa13.04□□□□□ -0.32
R3HCC1-202ENST00000411463 SCGB1C2P0DMR2 95 aa13.03□□□□□ -0.32
R3HCC1-202ENST00000411463 ORMDL1Q9P0S3 153 aa13.03□□□□□ -0.32
R3HCC1-202ENST00000411463 H3BMG7 143 aa13.01□□□□□ -0.33
R3HCC1-202ENST00000411463 TAX1BP3O14907 124 aa13.01□□□□□ -0.33
R3HCC1-202ENST00000411463 H3BQ85 93 aa13□□□□□ -0.33
R3HCC1-202ENST00000411463 MUC2Q02817 5179 aa12.98□□□□□ -0.33
R3HCC1-202ENST00000411463 ASB16-AS1Q495Z4 193 aa12.97□□□□□ -0.33
R3HCC1-202ENST00000411463 TMEM256-PLSCR3K7ERE1 68 aa12.96□□□□□ -0.34
R3HCC1-202ENST00000411463 TRACP01848 142 aa12.96□□□□□ -0.34
R3HCC1-202ENST00000411463 LST1O00453 97 aa12.95□□□□□ -0.34
R3HCC1-202ENST00000411463 XP32Q5T750 250 aa12.95□□□□□ -0.34
R3HCC1-202ENST00000411463 Q6Q795 121 aa12.95□□□□□ -0.34
R3HCC1-202ENST00000411463 C9orf118A6NHY6 69 aa12.94□□□□□ -0.34
R3HCC1-202ENST00000411463 TEN1Q86WV5 123 aa12.93□□□□□ -0.34
R3HCC1-202ENST00000411463 C9orf92A6NGG3 77 aa12.92□□□□□ -0.34
R3HCC1-202ENST00000411463 SEC61BP60468 96 aaKnown RBP12.9□□□□□ -0.34
R3HCC1-202ENST00000411463 NAA38Q9BRA0 125 aaKnown RBP12.89□□□□□ -0.35
R3HCC1-202ENST00000411463 UBE2V1Q13404 147 aa12.88□□□□□ -0.35
R3HCC1-202ENST00000411463 MUC17Q685J3 4493 aa12.88□□□□□ -0.35
R3HCC1-202ENST00000411463 A0A1B0GV72 72 aa12.87□□□□□ -0.35
R3HCC1-202ENST00000411463 SS18L2Q9UHA2 77 aa12.87□□□□□ -0.35
R3HCC1-202ENST00000411463 ANKRD29Q8N6D5 301 aa12.86□□□□□ -0.35
R3HCC1-202ENST00000411463 A0A087WSZ3 146 aa12.84□□□□□ -0.35
R3HCC1-202ENST00000411463 A0A1W2PNM2 257 aa12.84□□□□□ -0.35
R3HCC1-202ENST00000411463 A0A1W2PPM0 123 aa12.83□□□□□ -0.36
R3HCC1-202ENST00000411463 A0A1B0GV90 55 aa12.82□□□□□ -0.36
R3HCC1-202ENST00000411463 ATXN8Q156A1 80 aa12.82□□□□□ -0.36
R3HCC1-202ENST00000411463 BAALC-AS2P0C853 105 aa12.81□□□□□ -0.36
R3HCC1-202ENST00000411463 A0A0U1RQV1 116 aa12.8□□□□□ -0.36
R3HCC1-202ENST00000411463 TRBV7-4A0A0J9YYF1 115 aa12.78□□□□□ -0.36
R3HCC1-202ENST00000411463 LYRM7Q5U5X0 104 aa12.77□□□□□ -0.37
R3HCC1-202ENST00000411463 CCKP06307 115 aa12.75□□□□□ -0.37
R3HCC1-202ENST00000411463 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
R3HCC1-202ENST00000411463 DSCR8Q96T75 97 aa12.72□□□□□ -0.37
R3HCC1-202ENST00000411463 KRTAP4-1Q9BYQ7 146 aa12.72□□□□□ -0.37
R3HCC1-202ENST00000411463 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.38
R3HCC1-202ENST00000411463 Q96NJ1 140 aa12.71□□□□□ -0.38
R3HCC1-202ENST00000411463 SPCS1Q9Y6A9 102 aa12.71□□□□□ -0.38
R3HCC1-202ENST00000411463 PCOTHQ58A44 107 aa12.7□□□□□ -0.38
R3HCC1-202ENST00000411463 K7EP34 96 aa12.69□□□□□ -0.38
R3HCC1-202ENST00000411463 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
R3HCC1-202ENST00000411463 RPL37P61927 97 aaKnown RBP12.67□□□□□ -0.38
R3HCC1-202ENST00000411463 OBSCN-AS1Q96MR7 158 aa12.67□□□□□ -0.38
R3HCC1-202ENST00000411463 VPS25Q9BRG1 176 aa12.67□□□□□ -0.38
R3HCC1-202ENST00000411463 C9JAW5 83 aa12.65□□□□□ -0.38
R3HCC1-202ENST00000411463 JMJD7-PLA2G4BH0Y9G9 81 aa12.63□□□□□ -0.39
R3HCC1-202ENST00000411463 SIGMAR1Q99720 223 aa12.61□□□□□ -0.39
R3HCC1-202ENST00000411463 IGKV4-1P06312 121 aa12.59□□□□□ -0.39
R3HCC1-202ENST00000411463 LINC00472Q9H8W2 130 aa12.59□□□□□ -0.39
R3HCC1-202ENST00000411463 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
R3HCC1-202ENST00000411463 DEFB116Q30KQ4 102 aa12.56□□□□□ -0.4
R3HCC1-202ENST00000411463 FAT4Q6V0I7 4981 aa12.55□□□□□ -0.4
R3HCC1-202ENST00000411463 LOC110117498A0A087WWA1 95 aa12.55□□□□□ -0.4
R3HCC1-202ENST00000411463 Q6ZQT0 140 aa12.55□□□□□ -0.4
R3HCC1-202ENST00000411463 Q75L30 129 aa12.54□□□□□ -0.4
R3HCC1-202ENST00000411463 PDE6GP18545 87 aa12.53□□□□□ -0.4
R3HCC1-202ENST00000411463 C14orf132Q9NPU4 83 aa12.52□□□□□ -0.41
R3HCC1-202ENST00000411463 F8W1H4 67 aa12.51□□□□□ -0.41
R3HCC1-202ENST00000411463 DSCR10P59022 87 aa12.51□□□□□ -0.41
R3HCC1-202ENST00000411463 H3BT86 120 aa12.5□□□□□ -0.41
R3HCC1-202ENST00000411463 PRO0461Q9UI25 63 aa12.5□□□□□ -0.41
R3HCC1-202ENST00000411463 LCE2AQ5TA79 106 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms