RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
PRPF40A-202ENST00000410080 CENPEQ02224 2701 aa7.08□□□□□ -1.28
PRPF40A-202ENST00000410080 STAB1Q9NY15 2570 aa7.06□□□□□ -1.28
PRPF40A-202ENST00000410080 HELZ2Q9BYK8 2649 aaKnown RBP7.06□□□□□ -1.28
PRPF40A-202ENST00000410080 VPS13AQ96RL7 3174 aa7.06□□□□□ -1.28
PRPF40A-202ENST00000410080 CHD6Q8TD26 2715 aa7.05□□□□□ -1.28
PRPF40A-202ENST00000410080 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
PRPF40A-202ENST00000410080 FLNBO75369 2602 aaKnown RBP7.04□□□□□ -1.28
PRPF40A-202ENST00000410080 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
PRPF40A-202ENST00000410080 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
PRPF40A-202ENST00000410080 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
PRPF40A-202ENST00000410080 WDFY4Q6ZS81 3184 aa7.02□□□□□ -1.29
PRPF40A-202ENST00000410080 NBEAL1Q6ZS30 2694 aa7.02□□□□□ -1.29
PRPF40A-202ENST00000410080 SZT2Q5T011 3432 aa7.01□□□□□ -1.29
PRPF40A-202ENST00000410080 A0A1W2PNM2 257 aa7.01□□□□□ -1.29
PRPF40A-202ENST00000410080 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
PRPF40A-202ENST00000410080 H7BZZ5 65 aa7□□□□□ -1.29
PRPF40A-202ENST00000410080 A0A0A0MQY5 61 aa6.99□□□□□ -1.29
PRPF40A-202ENST00000410080 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
PRPF40A-202ENST00000410080 DMAC1Q96GE9 116 aa6.98□□□□□ -1.29
PRPF40A-202ENST00000410080 SPINK7P58062 85 aa6.97□□□□□ -1.29
PRPF40A-202ENST00000410080 COL6A5A8TX70 2615 aa6.96□□□□□ -1.3
PRPF40A-202ENST00000410080 SPEGQ15772 3267 aa6.96□□□□□ -1.3
PRPF40A-202ENST00000410080 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.3
PRPF40A-202ENST00000410080 KMT2BQ9UMN6 2715 aaPredicted RBP6.95□□□□□ -1.3
PRPF40A-202ENST00000410080 CRYBG3Q68DQ2 2970 aa6.95□□□□□ -1.3
PRPF40A-202ENST00000410080 FAM229BQ4G0N7 80 aa6.94□□□□□ -1.3
PRPF40A-202ENST00000410080 UNC80Q8N2C7 3258 aa6.94□□□□□ -1.3
PRPF40A-202ENST00000410080 M0QZ58 72 aa6.94□□□□□ -1.3
PRPF40A-202ENST00000410080 USP34Q70CQ2 3546 aa6.92□□□□□ -1.3
PRPF40A-202ENST00000410080 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
PRPF40A-202ENST00000410080 MGAQ8IWI9 3026 aa6.91□□□□□ -1.3
PRPF40A-202ENST00000410080 COL6A3P12111 3177 aa6.9□□□□□ -1.31
PRPF40A-202ENST00000410080 OXTP01178 125 aa6.89□□□□□ -1.31
PRPF40A-202ENST00000410080 UNC79Q9P2D8 2635 aa6.88□□□□□ -1.31
PRPF40A-202ENST00000410080 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
PRPF40A-202ENST00000410080 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
PRPF40A-202ENST00000410080 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
PRPF40A-202ENST00000410080 VCANP13611 3396 aa6.86□□□□□ -1.31
PRPF40A-202ENST00000410080 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
PRPF40A-202ENST00000410080 FRYQ5TBA9 3013 aa6.85□□□□□ -1.31
PRPF40A-202ENST00000410080 Q5W150 140 aa6.83□□□□□ -1.32
PRPF40A-202ENST00000410080 CHD7Q9P2D1 2997 aa6.83□□□□□ -1.32
PRPF40A-202ENST00000410080 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
PRPF40A-202ENST00000410080 ASH1LQ9NR48 2969 aaKnown RBP6.81□□□□□ -1.32
PRPF40A-202ENST00000410080 Q75L30 129 aa6.8□□□□□ -1.32
PRPF40A-202ENST00000410080 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
PRPF40A-202ENST00000410080 CFAP47Q6ZTR5 3102 aa6.79□□□□□ -1.32
PRPF40A-202ENST00000410080 LCE6AA0A183 80 aa6.79□□□□□ -1.32
PRPF40A-202ENST00000410080 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
PRPF40A-202ENST00000410080 HTTP42858 3142 aa6.79□□□□□ -1.32
PRPF40A-202ENST00000410080 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
PRPF40A-202ENST00000410080 SPTBN5Q9NRC6 3674 aaKnown RBP6.78□□□□□ -1.32
PRPF40A-202ENST00000410080 ROMO1P60602 79 aa6.77□□□□□ -1.33
PRPF40A-202ENST00000410080 APCP25054 2843 aa6.77□□□□□ -1.33
PRPF40A-202ENST00000410080 MAP1AP78559 2803 aaPredicted RBP6.77□□□□□ -1.33
PRPF40A-202ENST00000410080 LAMA1P25391 3075 aa6.77□□□□□ -1.33
PRPF40A-202ENST00000410080 DSPP15924 2871 aaKnown RBP6.77□□□□□ -1.33
PRPF40A-202ENST00000410080 MMP24-AS1A0A0U1RRL7 71 aa6.75□□□□□ -1.33
PRPF40A-202ENST00000410080 WDFY3Q8IZQ1 3526 aa6.75□□□□□ -1.33
PRPF40A-202ENST00000410080 BAHCC1Q9P281 2608 aa6.74□□□□□ -1.33
PRPF40A-202ENST00000410080 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
PRPF40A-202ENST00000410080 GCN1Q92616 2671 aaKnown RBP6.74□□□□□ -1.33
PRPF40A-202ENST00000410080 NOTCH1P46531 2555 aa6.73□□□□□ -1.33
PRPF40A-202ENST00000410080 LRBAP50851 2863 aa6.73□□□□□ -1.33
PRPF40A-202ENST00000410080 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
PRPF40A-202ENST00000410080 Q8NDZ9 215 aa6.72□□□□□ -1.33
PRPF40A-202ENST00000410080 KALRNO60229 2985 aa6.71□□□□□ -1.33
PRPF40A-202ENST00000410080 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
PRPF40A-202ENST00000410080 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
PRPF40A-202ENST00000410080 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
PRPF40A-202ENST00000410080 FP248Q71RG6 208 aaPredicted RBP6.7□□□□□ -1.34
PRPF40A-202ENST00000410080 SETXQ7Z333 2677 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-202ENST00000410080 ASPMQ8IZT6 3477 aa6.69□□□□□ -1.34
PRPF40A-202ENST00000410080 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
PRPF40A-202ENST00000410080 TRANK1O15050 2925 aa6.68□□□□□ -1.34
PRPF40A-202ENST00000410080 STAB2Q8WWQ8 2551 aa6.68□□□□□ -1.34
PRPF40A-202ENST00000410080 NBPF19A0A087WUL8 3843 aa6.65□□□□□ -1.34
PRPF40A-202ENST00000410080 NSD1Q96L73 2696 aaPredicted RBP6.65□□□□□ -1.34
PRPF40A-202ENST00000410080 MYO15AQ9UKN7 3530 aa6.65□□□□□ -1.34
PRPF40A-202ENST00000410080 BOD1L1Q8NFC6 3051 aa6.64□□□□□ -1.35
PRPF40A-202ENST00000410080 ZNF292O60281 2723 aa6.63□□□□□ -1.35
PRPF40A-202ENST00000410080 FRYLO94915 3013 aa6.62□□□□□ -1.35
PRPF40A-202ENST00000410080 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
PRPF40A-202ENST00000410080 A8MUU9 505 aa6.6□□□□□ -1.35
PRPF40A-202ENST00000410080 Q5XG85 94 aa6.6□□□□□ -1.35
PRPF40A-202ENST00000410080 Q6ZR54 194 aa6.6□□□□□ -1.35
PRPF40A-202ENST00000410080 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
PRPF40A-202ENST00000410080 Q5VV11 94 aa6.59□□□□□ -1.35
PRPF40A-202ENST00000410080 KRTAP26-1Q6PEX3 210 aa6.58□□□□□ -1.36
PRPF40A-202ENST00000410080 A0A087X002 238 aa6.57□□□□□ -1.36
PRPF40A-202ENST00000410080 COL12A1Q99715 3063 aa6.57□□□□□ -1.36
PRPF40A-202ENST00000410080 ATMQ13315 3056 aa6.56□□□□□ -1.36
PRPF40A-202ENST00000410080 ZZEF1O43149 2961 aa6.56□□□□□ -1.36
PRPF40A-202ENST00000410080 PANO1I0J062 215 aa6.56□□□□□ -1.36
PRPF40A-202ENST00000410080 SPRR1AP35321 89 aa6.56□□□□□ -1.36
PRPF40A-202ENST00000410080 SPRR1BP22528 89 aa6.55□□□□□ -1.36
PRPF40A-202ENST00000410080 DMXL2Q8TDJ6 3036 aa6.55□□□□□ -1.36
PRPF40A-202ENST00000410080 LAMA5O15230 3695 aa6.54□□□□□ -1.36
PRPF40A-202ENST00000410080 CYSTM1Q9H1C7 97 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms