RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SPRR1AP35321 89 aa8.09□□□□□ -1.11
HERC3-203ENST00000407637 LINC00313P59037 77 aa8.09□□□□□ -1.11
HERC3-203ENST00000407637 PCOTHQ58A44 107 aa8.09□□□□□ -1.11
HERC3-203ENST00000407637 ITPR3Q14573 2671 aa8.08□□□□□ -1.12
HERC3-203ENST00000407637 H3BS24 57 aa8.07□□□□□ -1.12
HERC3-203ENST00000407637 HIVEP1P15822 2718 aa8.05□□□□□ -1.12
HERC3-203ENST00000407637 VWFP04275 2813 aa8.05□□□□□ -1.12
HERC3-203ENST00000407637 Q8NAQ8 132 aa8.05□□□□□ -1.12
HERC3-203ENST00000407637 ADM2Q7Z4H4 148 aa8.04□□□□□ -1.12
HERC3-203ENST00000407637 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
HERC3-203ENST00000407637 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
HERC3-203ENST00000407637 TENM4Q6N022 2769 aa8.03□□□□□ -1.12
HERC3-203ENST00000407637 FLNAP21333 2647 aaKnown RBP8.03□□□□□ -1.12
HERC3-203ENST00000407637 SPART-AS1P0CW21 52 aa8.02□□□□□ -1.12
HERC3-203ENST00000407637 PKD1L1Q8TDX9 2849 aa8.02□□□□□ -1.13
HERC3-203ENST00000407637 HELZ2Q9BYK8 2649 aaKnown RBP8.01□□□□□ -1.13
HERC3-203ENST00000407637 BAHCC1Q9P281 2608 aa8.01□□□□□ -1.13
HERC3-203ENST00000407637 PLA2G2DQ9UNK4 145 aa8.01□□□□□ -1.13
HERC3-203ENST00000407637 A8MWP4 228 aa8□□□□□ -1.13
HERC3-203ENST00000407637 TRRAPQ9Y4A5 3859 aa8□□□□□ -1.13
HERC3-203ENST00000407637 KRTAP10-9P60411 292 aa7.99□□□□□ -1.13
HERC3-203ENST00000407637 HRES1P13985 223 aa7.98□□□□□ -1.13
HERC3-203ENST00000407637 KMT2BQ9UMN6 2715 aaPredicted RBP7.98□□□□□ -1.13
HERC3-203ENST00000407637 UBR5O95071 2799 aaPredicted RBP7.98□□□□□ -1.13
HERC3-203ENST00000407637 FASNP49327 2511 aaKnown RBP7.98□□□□□ -1.13
HERC3-203ENST00000407637 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
HERC3-203ENST00000407637 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
HERC3-203ENST00000407637 ACANP16112 2415 aa7.97□□□□□ -1.13
HERC3-203ENST00000407637 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
HERC3-203ENST00000407637 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
HERC3-203ENST00000407637 H0Y9J4 135 aa7.97□□□□□ -1.13
HERC3-203ENST00000407637 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
HERC3-203ENST00000407637 MDFIQ99750 246 aa7.97□□□□□ -1.13
HERC3-203ENST00000407637 PRLHP81277 87 aa7.96□□□□□ -1.14
HERC3-203ENST00000407637 TENM2Q9NT68 2774 aa7.96□□□□□ -1.14
HERC3-203ENST00000407637 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
HERC3-203ENST00000407637 LINC00472Q9H8W2 130 aa7.96□□□□□ -1.14
HERC3-203ENST00000407637 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
HERC3-203ENST00000407637 DEFB113Q30KQ7 82 aa7.93□□□□□ -1.14
HERC3-203ENST00000407637 HECTD1Q9ULT8 2610 aa7.92□□□□□ -1.14
HERC3-203ENST00000407637 IGKV2-24A0A0C4DH68 120 aa7.91□□□□□ -1.14
HERC3-203ENST00000407637 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
HERC3-203ENST00000407637 KRTAP10-3P60369 221 aa7.9□□□□□ -1.14
HERC3-203ENST00000407637 PRR26Q8N8Z3 221 aa7.9□□□□□ -1.15
HERC3-203ENST00000407637 CASC10Q5T4H9 136 aa7.89□□□□□ -1.15
HERC3-203ENST00000407637 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
HERC3-203ENST00000407637 LINC01556Q5JQF7 62 aa7.88□□□□□ -1.15
HERC3-203ENST00000407637 NOTCH2Q04721 2471 aa7.88□□□□□ -1.15
HERC3-203ENST00000407637 ITPR2Q14571 2701 aa7.87□□□□□ -1.15
HERC3-203ENST00000407637 Q6ZR54 194 aa7.86□□□□□ -1.15
HERC3-203ENST00000407637 A0A096LNI7 61 aa7.86□□□□□ -1.15
HERC3-203ENST00000407637 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
HERC3-203ENST00000407637 ALMS1Q8TCU4 4167 aa7.85□□□□□ -1.15
HERC3-203ENST00000407637 RTL8CO15255 209 aa7.83□□□□□ -1.16
HERC3-203ENST00000407637 DNAH1Q9P2D7 4330 aa7.83□□□□□ -1.16
HERC3-203ENST00000407637 H3BNG1 76 aa7.82□□□□□ -1.16
HERC3-203ENST00000407637 ASB16-AS1Q495Z4 193 aa7.82□□□□□ -1.16
HERC3-203ENST00000407637 TEP1Q99973 2627 aaKnown RBP7.81□□□□□ -1.16
HERC3-203ENST00000407637 DEFB131BA0A096LNP1 70 aa7.81□□□□□ -1.16
HERC3-203ENST00000407637 PDZD2O15018 2839 aa7.8□□□□□ -1.16
HERC3-203ENST00000407637 C8orf17Q9NRJ1 99 aa7.8□□□□□ -1.16
HERC3-203ENST00000407637 TENM3Q9P273 2699 aa7.79□□□□□ -1.16
HERC3-203ENST00000407637 FLNBO75369 2602 aaKnown RBP7.79□□□□□ -1.16
HERC3-203ENST00000407637 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
HERC3-203ENST00000407637 Q96NJ1 140 aa7.78□□□□□ -1.16
HERC3-203ENST00000407637 FBN1P35555 2871 aaKnown RBP7.78□□□□□ -1.16
HERC3-203ENST00000407637 IGHV6-1A0A0B4J1U7 121 aa7.76□□□□□ -1.17
HERC3-203ENST00000407637 K7EIL1 84 aa7.76□□□□□ -1.17
HERC3-203ENST00000407637 DNAH10OSP0CZ25 163 aa7.76□□□□□ -1.17
HERC3-203ENST00000407637 CSAG1Q6PB30 78 aa7.76□□□□□ -1.17
HERC3-203ENST00000407637 SPRR1BP22528 89 aa7.75□□□□□ -1.17
HERC3-203ENST00000407637 RETNLBQ9BQ08 111 aa7.75□□□□□ -1.17
HERC3-203ENST00000407637 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
HERC3-203ENST00000407637 KRTAP1-1Q07627 177 aa7.74□□□□□ -1.17
HERC3-203ENST00000407637 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
HERC3-203ENST00000407637 SPATA8Q6RVD6 105 aa7.73□□□□□ -1.17
HERC3-203ENST00000407637 A0A1B0GU69 56 aa7.72□□□□□ -1.17
HERC3-203ENST00000407637 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.17
HERC3-203ENST00000407637 ANK2Q01484 3957 aa7.71□□□□□ -1.18
HERC3-203ENST00000407637 A0A1B0GVX0 72 aa7.7□□□□□ -1.18
HERC3-203ENST00000407637 A0A087X002 238 aa7.69□□□□□ -1.18
HERC3-203ENST00000407637 ACYP2P14621 99 aa7.69□□□□□ -1.18
HERC3-203ENST00000407637 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
HERC3-203ENST00000407637 MIR22HGQ0VDD5 57 aa7.69□□□□□ -1.18
HERC3-203ENST00000407637 ATRQ13535 2644 aa7.68□□□□□ -1.18
HERC3-203ENST00000407637 IGLV9-49A0A0B4J1Y8 123 aa7.67□□□□□ -1.18
HERC3-203ENST00000407637 Q5W150 140 aa7.66□□□□□ -1.18
HERC3-203ENST00000407637 J3QKU1 62 aa7.65□□□□□ -1.18
HERC3-203ENST00000407637 COL7A1Q02388 2944 aa7.65□□□□□ -1.18
HERC3-203ENST00000407637 LYSTQ99698 3801 aa7.65□□□□□ -1.19
HERC3-203ENST00000407637 CDK2AP2O75956 126 aa7.64□□□□□ -1.19
HERC3-203ENST00000407637 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
HERC3-203ENST00000407637 UQCR11O14957 56 aa7.63□□□□□ -1.19
HERC3-203ENST00000407637 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
HERC3-203ENST00000407637 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
HERC3-203ENST00000407637 SMR3AQ99954 134 aa7.58□□□□□ -1.2
HERC3-203ENST00000407637 C1orf134Q5TEV5 83 aa7.58□□□□□ -1.2
HERC3-203ENST00000407637 ZNF861PO60384 105 aa7.57□□□□□ -1.2
HERC3-203ENST00000407637 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
HERC3-203ENST00000407637 ZNF706Q9Y5V0 76 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms