RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CASC10Q5T4H9 136 aa7.65□□□□□ -1.19
SMCR8-201ENST00000406438 H3BS24 57 aa7.64□□□□□ -1.19
SMCR8-201ENST00000406438 A0A1B0GU33 70 aa7.64□□□□□ -1.19
SMCR8-201ENST00000406438 MGAQ8IWI9 3026 aa7.64□□□□□ -1.19
SMCR8-201ENST00000406438 ITPR2Q14571 2701 aa7.63□□□□□ -1.19
SMCR8-201ENST00000406438 CHD7Q9P2D1 2997 aa7.63□□□□□ -1.19
SMCR8-201ENST00000406438 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
SMCR8-201ENST00000406438 S4R3F8 94 aa7.6□□□□□ -1.19
SMCR8-201ENST00000406438 OCR1Q9BZK8 76 aa7.6□□□□□ -1.19
SMCR8-201ENST00000406438 PRUNE2Q8WUY3 3088 aa7.59□□□□□ -1.19
SMCR8-201ENST00000406438 FAM229BQ4G0N7 80 aa7.58□□□□□ -1.2
SMCR8-201ENST00000406438 TNP2Q05952 138 aa7.57□□□□□ -1.2
SMCR8-201ENST00000406438 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
SMCR8-201ENST00000406438 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
SMCR8-201ENST00000406438 TEP1Q99973 2627 aaKnown RBP7.54□□□□□ -1.2
SMCR8-201ENST00000406438 Q75L30 129 aa7.54□□□□□ -1.2
SMCR8-201ENST00000406438 FREM2Q5SZK8 3169 aa7.54□□□□□ -1.2
SMCR8-201ENST00000406438 RANBP2P49792 3224 aaKnown RBP7.54□□□□□ -1.2
SMCR8-201ENST00000406438 DNAH14Q0VDD8 3507 aa7.53□□□□□ -1.2
SMCR8-201ENST00000406438 APCP25054 2843 aa7.53□□□□□ -1.2
SMCR8-201ENST00000406438 Q5XG85 94 aa7.52□□□□□ -1.21
SMCR8-201ENST00000406438 FRYQ5TBA9 3013 aa7.52□□□□□ -1.21
SMCR8-201ENST00000406438 STAB2Q8WWQ8 2551 aa7.52□□□□□ -1.21
SMCR8-201ENST00000406438 LAMA3Q16787 3333 aa7.51□□□□□ -1.21
SMCR8-201ENST00000406438 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
SMCR8-201ENST00000406438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.51□□□□□ -1.21
SMCR8-201ENST00000406438 WDFY4Q6ZS81 3184 aa7.5□□□□□ -1.21
SMCR8-201ENST00000406438 ZCCHC13Q8WW36 166 aaKnown RBP7.5□□□□□ -1.21
SMCR8-201ENST00000406438 R4GN34 69 aa7.49□□□□□ -1.21
SMCR8-201ENST00000406438 TRANK1O15050 2925 aa7.49□□□□□ -1.21
SMCR8-201ENST00000406438 BRCA2P51587 3418 aa7.49□□□□□ -1.21
SMCR8-201ENST00000406438 ZNF292O60281 2723 aa7.47□□□□□ -1.21
SMCR8-201ENST00000406438 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
SMCR8-201ENST00000406438 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
SMCR8-201ENST00000406438 SETXQ7Z333 2677 aaKnown RBP7.46□□□□□ -1.22
SMCR8-201ENST00000406438 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
SMCR8-201ENST00000406438 KRTAP1-1Q07627 177 aa7.43□□□□□ -1.22
SMCR8-201ENST00000406438 UNC80Q8N2C7 3258 aa7.42□□□□□ -1.22
SMCR8-201ENST00000406438 DSPP15924 2871 aaKnown RBP7.41□□□□□ -1.22
SMCR8-201ENST00000406438 NBEAL2Q6ZNJ1 2754 aa7.4□□□□□ -1.22
SMCR8-201ENST00000406438 KALRNO60229 2985 aa7.4□□□□□ -1.23
SMCR8-201ENST00000406438 CDH23Q9H251 3354 aa7.39□□□□□ -1.23
SMCR8-201ENST00000406438 MMP24-AS1A0A0U1RRL7 71 aa7.39□□□□□ -1.23
SMCR8-201ENST00000406438 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
SMCR8-201ENST00000406438 Q5W150 140 aa7.37□□□□□ -1.23
SMCR8-201ENST00000406438 SPINK7P58062 85 aa7.37□□□□□ -1.23
SMCR8-201ENST00000406438 Q8N9P0 234 aaPredicted RBP7.36□□□□□ -1.23
SMCR8-201ENST00000406438 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
SMCR8-201ENST00000406438 FRYLO94915 3013 aa7.34□□□□□ -1.23
SMCR8-201ENST00000406438 LAMA1P25391 3075 aa7.34□□□□□ -1.23
SMCR8-201ENST00000406438 LRBAP50851 2863 aa7.34□□□□□ -1.23
SMCR8-201ENST00000406438 BAHCC1Q9P281 2608 aa7.34□□□□□ -1.24
SMCR8-201ENST00000406438 FP248Q71RG6 208 aaPredicted RBP7.34□□□□□ -1.24
SMCR8-201ENST00000406438 Q5VSD8 79 aa7.33□□□□□ -1.24
SMCR8-201ENST00000406438 USP34Q70CQ2 3546 aa7.33□□□□□ -1.24
SMCR8-201ENST00000406438 SPRR1AP35321 89 aa7.32□□□□□ -1.24
SMCR8-201ENST00000406438 LINC00472Q9H8W2 130 aa7.31□□□□□ -1.24
SMCR8-201ENST00000406438 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
SMCR8-201ENST00000406438 ROMO1P60602 79 aa7.3□□□□□ -1.24
SMCR8-201ENST00000406438 ASH1LQ9NR48 2969 aaKnown RBP7.29□□□□□ -1.24
SMCR8-201ENST00000406438 M0QZ58 72 aa7.29□□□□□ -1.24
SMCR8-201ENST00000406438 RPL37P61927 97 aaKnown RBP7.28□□□□□ -1.24
SMCR8-201ENST00000406438 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
SMCR8-201ENST00000406438 CRYBG3Q68DQ2 2970 aa7.28□□□□□ -1.24
SMCR8-201ENST00000406438 Q5VV11 94 aa7.28□□□□□ -1.24
SMCR8-201ENST00000406438 UTP20O75691 2785 aaKnown RBP7.26□□□□□ -1.25
SMCR8-201ENST00000406438 HTTP42858 3142 aa7.25□□□□□ -1.25
SMCR8-201ENST00000406438 COL6A3P12111 3177 aa7.25□□□□□ -1.25
SMCR8-201ENST00000406438 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
SMCR8-201ENST00000406438 SPRR1BP22528 89 aa7.24□□□□□ -1.25
SMCR8-201ENST00000406438 NSD1Q96L73 2696 aaPredicted RBP7.24□□□□□ -1.25
SMCR8-201ENST00000406438 Q8NDZ9 215 aa7.22□□□□□ -1.25
SMCR8-201ENST00000406438 CHD9Q3L8U1 2897 aa7.21□□□□□ -1.26
SMCR8-201ENST00000406438 OXTP01178 125 aa7.21□□□□□ -1.26
SMCR8-201ENST00000406438 ITPR1Q14643 2758 aa7.2□□□□□ -1.26
SMCR8-201ENST00000406438 VCANP13611 3396 aa7.2□□□□□ -1.26
SMCR8-201ENST00000406438 ADM2Q7Z4H4 148 aa7.2□□□□□ -1.26
SMCR8-201ENST00000406438 DMXL2Q8TDJ6 3036 aa7.19□□□□□ -1.26
SMCR8-201ENST00000406438 SPEGQ15772 3267 aa7.19□□□□□ -1.26
SMCR8-201ENST00000406438 IGSF10Q6WRI0 2623 aa7.18□□□□□ -1.26
SMCR8-201ENST00000406438 KRTAP26-1Q6PEX3 210 aa7.17□□□□□ -1.26
SMCR8-201ENST00000406438 UBR5O95071 2799 aaPredicted RBP7.17□□□□□ -1.26
SMCR8-201ENST00000406438 COL12A1Q99715 3063 aa7.16□□□□□ -1.26
SMCR8-201ENST00000406438 BOD1L1Q8NFC6 3051 aa7.16□□□□□ -1.26
SMCR8-201ENST00000406438 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
SMCR8-201ENST00000406438 LCE6AA0A183 80 aa7.14□□□□□ -1.27
SMCR8-201ENST00000406438 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
SMCR8-201ENST00000406438 SZT2Q5T011 3432 aa7.14□□□□□ -1.27
SMCR8-201ENST00000406438 KRTAP1-5Q9BYS1 174 aa7.14□□□□□ -1.27
SMCR8-201ENST00000406438 Q6ZR54 194 aa7.13□□□□□ -1.27
SMCR8-201ENST00000406438 CFAP47Q6ZTR5 3102 aa7.11□□□□□ -1.27
SMCR8-201ENST00000406438 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
SMCR8-201ENST00000406438 TACC2O95359 2948 aa7.11□□□□□ -1.27
SMCR8-201ENST00000406438 PANO1I0J062 215 aa7.08□□□□□ -1.28
SMCR8-201ENST00000406438 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
SMCR8-201ENST00000406438 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
SMCR8-201ENST00000406438 ZZEF1O43149 2961 aa7.06□□□□□ -1.28
SMCR8-201ENST00000406438 ADGRG4Q8IZF6 3080 aa7.03□□□□□ -1.28
SMCR8-201ENST00000406438 NBEAQ8NFP9 2946 aa7.01□□□□□ -1.29
SMCR8-201ENST00000406438 A0A087X002 238 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms