RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
SNED1-205ENST00000405547 REV3LO60673 3130 aa8.53□□□□□ -1.04
SNED1-205ENST00000405547 VCANP13611 3396 aa8.52□□□□□ -1.05
SNED1-205ENST00000405547 PSORS1C2Q9UIG4 136 aa8.52□□□□□ -1.05
SNED1-205ENST00000405547 CRIPTQ9P021 101 aa8.51□□□□□ -1.05
SNED1-205ENST00000405547 ITPR2Q14571 2701 aa8.51□□□□□ -1.05
SNED1-205ENST00000405547 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
SNED1-205ENST00000405547 FRYLO94915 3013 aa8.51□□□□□ -1.05
SNED1-205ENST00000405547 WWC2-AS2Q96NR7 200 aa8.5□□□□□ -1.05
SNED1-205ENST00000405547 STAB2Q8WWQ8 2551 aa8.5□□□□□ -1.05
SNED1-205ENST00000405547 KRTAP1-3Q8IUG1 177 aa8.49□□□□□ -1.05
SNED1-205ENST00000405547 ITPR1Q14643 2758 aa8.48□□□□□ -1.05
SNED1-205ENST00000405547 IGLV7-46A0A075B6I9 117 aa8.48□□□□□ -1.05
SNED1-205ENST00000405547 CASC10Q5T4H9 136 aa8.48□□□□□ -1.05
SNED1-205ENST00000405547 APCP25054 2843 aa8.48□□□□□ -1.05
SNED1-205ENST00000405547 LRBAP50851 2863 aa8.47□□□□□ -1.05
SNED1-205ENST00000405547 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
SNED1-205ENST00000405547 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
SNED1-205ENST00000405547 TACC2O95359 2948 aa8.44□□□□□ -1.06
SNED1-205ENST00000405547 Q75L30 129 aa8.44□□□□□ -1.06
SNED1-205ENST00000405547 Q5XG85 94 aa8.43□□□□□ -1.06
SNED1-205ENST00000405547 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
SNED1-205ENST00000405547 UBR5O95071 2799 aaPredicted RBP8.42□□□□□ -1.06
SNED1-205ENST00000405547 KRTAP1-1Q07627 177 aa8.41□□□□□ -1.06
SNED1-205ENST00000405547 CYSTM1Q9H1C7 97 aa8.4□□□□□ -1.07
SNED1-205ENST00000405547 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.07
SNED1-205ENST00000405547 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
SNED1-205ENST00000405547 BOD1L1Q8NFC6 3051 aa8.39□□□□□ -1.07
SNED1-205ENST00000405547 ADGRG4Q8IZF6 3080 aa8.39□□□□□ -1.07
SNED1-205ENST00000405547 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
SNED1-205ENST00000405547 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
SNED1-205ENST00000405547 SPRR1AP35321 89 aa8.37□□□□□ -1.07
SNED1-205ENST00000405547 DMXL2Q8TDJ6 3036 aa8.37□□□□□ -1.07
SNED1-205ENST00000405547 ASH1LQ9NR48 2969 aaKnown RBP8.36□□□□□ -1.07
SNED1-205ENST00000405547 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
SNED1-205ENST00000405547 IGSF10Q6WRI0 2623 aa8.35□□□□□ -1.07
SNED1-205ENST00000405547 Q8NDZ9 215 aa8.35□□□□□ -1.07
SNED1-205ENST00000405547 Q8N1X5 172 aa8.35□□□□□ -1.07
SNED1-205ENST00000405547 COL6A3P12111 3177 aa8.35□□□□□ -1.07
SNED1-205ENST00000405547 UTP20O75691 2785 aaKnown RBP8.32□□□□□ -1.08
SNED1-205ENST00000405547 SZT2Q5T011 3432 aa8.32□□□□□ -1.08
SNED1-205ENST00000405547 LINC01558Q9Y6Z2 57 aa8.32□□□□□ -1.08
SNED1-205ENST00000405547 MMP24-AS1A0A0U1RRL7 71 aa8.3□□□□□ -1.08
SNED1-205ENST00000405547 FLNCQ14315 2725 aa8.3□□□□□ -1.08
SNED1-205ENST00000405547 HRES1P13985 223 aa8.3□□□□□ -1.08
SNED1-205ENST00000405547 NSD1Q96L73 2696 aaPredicted RBP8.29□□□□□ -1.08
SNED1-205ENST00000405547 RBM12B-AS1Q9P1G2 102 aa8.29□□□□□ -1.08
SNED1-205ENST00000405547 LINC00472Q9H8W2 130 aa8.27□□□□□ -1.09
SNED1-205ENST00000405547 CFAP47Q6ZTR5 3102 aa8.26□□□□□ -1.09
SNED1-205ENST00000405547 Q5VV11 94 aa8.26□□□□□ -1.09
SNED1-205ENST00000405547 A0A1B0GU33 70 aa8.25□□□□□ -1.09
SNED1-205ENST00000405547 A0A0D9SG42 100 aa8.25□□□□□ -1.09
SNED1-205ENST00000405547 SPRR1BP22528 89 aa8.24□□□□□ -1.09
SNED1-205ENST00000405547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
SNED1-205ENST00000405547 BAHCC1Q9P281 2608 aa8.24□□□□□ -1.09
SNED1-205ENST00000405547 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
SNED1-205ENST00000405547 ZZEF1O43149 2961 aa8.23□□□□□ -1.09
SNED1-205ENST00000405547 COX6B2Q6YFQ2 88 aa8.21□□□□□ -1.09
SNED1-205ENST00000405547 USP34Q70CQ2 3546 aa8.21□□□□□ -1.1
SNED1-205ENST00000405547 OXTP01178 125 aa8.2□□□□□ -1.1
SNED1-205ENST00000405547 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
SNED1-205ENST00000405547 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
SNED1-205ENST00000405547 ATMQ13315 3056 aa8.18□□□□□ -1.1
SNED1-205ENST00000405547 LINC01554Q52M75 96 aa8.18□□□□□ -1.1
SNED1-205ENST00000405547 J3QL48 77 aa8.18□□□□□ -1.1
SNED1-205ENST00000405547 LUZP6Q538Z0 58 aa8.16□□□□□ -1.1
SNED1-205ENST00000405547 TNP2Q05952 138 aa8.16□□□□□ -1.1
SNED1-205ENST00000405547 CELSR2Q9HCU4 2923 aa8.15□□□□□ -1.1
SNED1-205ENST00000405547 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.11
SNED1-205ENST00000405547 DMXL1Q9Y485 3027 aa8.14□□□□□ -1.11
SNED1-205ENST00000405547 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
SNED1-205ENST00000405547 Q5W150 140 aa8.13□□□□□ -1.11
SNED1-205ENST00000405547 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
SNED1-205ENST00000405547 SPINK7P58062 85 aa8.1□□□□□ -1.11
SNED1-205ENST00000405547 SPEGQ15772 3267 aa8.1□□□□□ -1.11
SNED1-205ENST00000405547 TNRC18O15417 2968 aaPredicted RBP8.09□□□□□ -1.11
SNED1-205ENST00000405547 KRTAP4-16G5E9R7 235 aaPredicted RBP8.08□□□□□ -1.12
SNED1-205ENST00000405547 EYSQ5T1H1 3165 aa8.07□□□□□ -1.12
SNED1-205ENST00000405547 Q6ZR54 194 aa8.07□□□□□ -1.12
SNED1-205ENST00000405547 HIVEP1P15822 2718 aa8.06□□□□□ -1.12
SNED1-205ENST00000405547 ZANQ9Y493 2812 aa8.05□□□□□ -1.12
SNED1-205ENST00000405547 PRAC1Q96KF2 57 aa8.04□□□□□ -1.12
SNED1-205ENST00000405547 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
SNED1-205ENST00000405547 Q6ZSA8 131 aa8.03□□□□□ -1.12
SNED1-205ENST00000405547 LINC00483Q53H64 154 aa8.03□□□□□ -1.12
SNED1-205ENST00000405547 NIPBLQ6KC79 2804 aaeCLIP8.03□□□□□ -1.12
SNED1-205ENST00000405547 H3BS24 57 aa8.02□□□□□ -1.13
SNED1-205ENST00000405547 SPTBN5Q9NRC6 3674 aaKnown RBP8.01□□□□□ -1.13
SNED1-205ENST00000405547 ASB16-AS1Q495Z4 193 aa8.01□□□□□ -1.13
SNED1-205ENST00000405547 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
SNED1-205ENST00000405547 KRTAP1-5Q9BYS1 174 aa8.01□□□□□ -1.13
SNED1-205ENST00000405547 NF1P21359 2839 aa7.98□□□□□ -1.13
SNED1-205ENST00000405547 S4R3F8 94 aa7.98□□□□□ -1.13
SNED1-205ENST00000405547 LOC400499M0QZD8 3231 aa7.97□□□□□ -1.13
SNED1-205ENST00000405547 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
SNED1-205ENST00000405547 DCHS2Q6V1P9 2916 aa7.95□□□□□ -1.14
SNED1-205ENST00000405547 FBN2P35556 2912 aa7.95□□□□□ -1.14
SNED1-205ENST00000405547 CRYBG3Q68DQ2 2970 aa7.94□□□□□ -1.14
SNED1-205ENST00000405547 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
SNED1-205ENST00000405547 LCE6AA0A183 80 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms