RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CSAG1Q6PB30 78 aa8.41□□□□□ -1.06
VAPA-202ENST00000400000 CDH23Q9H251 3354 aa8.41□□□□□ -1.06
VAPA-202ENST00000400000 KRTAP10-2P60368 255 aa8.41□□□□□ -1.06
VAPA-202ENST00000400000 RANBP2P49792 3224 aaKnown RBP8.41□□□□□ -1.06
VAPA-202ENST00000400000 R4GN34 69 aa8.4□□□□□ -1.06
VAPA-202ENST00000400000 FREM2Q5SZK8 3169 aa8.4□□□□□ -1.06
VAPA-202ENST00000400000 UNC80Q8N2C7 3258 aa8.39□□□□□ -1.07
VAPA-202ENST00000400000 SPINK7P58062 85 aa8.38□□□□□ -1.07
VAPA-202ENST00000400000 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
VAPA-202ENST00000400000 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
VAPA-202ENST00000400000 MAST4O15021 2626 aa8.36□□□□□ -1.07
VAPA-202ENST00000400000 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
VAPA-202ENST00000400000 DNAH14Q0VDD8 3507 aa8.36□□□□□ -1.07
VAPA-202ENST00000400000 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
VAPA-202ENST00000400000 Q5W150 140 aa8.35□□□□□ -1.07
VAPA-202ENST00000400000 CFAP46Q8IYW2 2715 aa8.35□□□□□ -1.07
VAPA-202ENST00000400000 SZT2Q5T011 3432 aa8.32□□□□□ -1.08
VAPA-202ENST00000400000 MGAQ8IWI9 3026 aa8.32□□□□□ -1.08
VAPA-202ENST00000400000 WDFY4Q6ZS81 3184 aa8.31□□□□□ -1.08
VAPA-202ENST00000400000 HELZ2Q9BYK8 2649 aaKnown RBP8.31□□□□□ -1.08
VAPA-202ENST00000400000 M0QZ58 72 aa8.29□□□□□ -1.08
VAPA-202ENST00000400000 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
VAPA-202ENST00000400000 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
VAPA-202ENST00000400000 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
VAPA-202ENST00000400000 LCE6AA0A183 80 aa8.26□□□□□ -1.09
VAPA-202ENST00000400000 AKAP13Q12802 2813 aa8.25□□□□□ -1.09
VAPA-202ENST00000400000 HTTP42858 3142 aa8.25□□□□□ -1.09
VAPA-202ENST00000400000 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
VAPA-202ENST00000400000 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
VAPA-202ENST00000400000 ADM2Q7Z4H4 148 aa8.23□□□□□ -1.09
VAPA-202ENST00000400000 Q75L30 129 aa8.23□□□□□ -1.09
VAPA-202ENST00000400000 PANO1I0J062 215 aa8.22□□□□□ -1.09
VAPA-202ENST00000400000 TEX15Q9BXT5 2789 aa8.21□□□□□ -1.1
VAPA-202ENST00000400000 VPS13AQ96RL7 3174 aa8.2□□□□□ -1.1
VAPA-202ENST00000400000 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
VAPA-202ENST00000400000 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
VAPA-202ENST00000400000 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
VAPA-202ENST00000400000 CENPEQ02224 2701 aa8.17□□□□□ -1.1
VAPA-202ENST00000400000 LINC00472Q9H8W2 130 aa8.17□□□□□ -1.1
VAPA-202ENST00000400000 TEP1Q99973 2627 aaKnown RBP8.16□□□□□ -1.1
VAPA-202ENST00000400000 COL6A3P12111 3177 aa8.15□□□□□ -1.1
VAPA-202ENST00000400000 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.1
VAPA-202ENST00000400000 LINC01558Q9Y6Z2 57 aa8.15□□□□□ -1.1
VAPA-202ENST00000400000 Q5VV11 94 aa8.14□□□□□ -1.11
VAPA-202ENST00000400000 SPRR1AP35321 89 aa8.13□□□□□ -1.11
VAPA-202ENST00000400000 A0A087X002 238 aa8.12□□□□□ -1.11
VAPA-202ENST00000400000 H3BS24 57 aa8.12□□□□□ -1.11
VAPA-202ENST00000400000 FRYQ5TBA9 3013 aa8.11□□□□□ -1.11
VAPA-202ENST00000400000 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
VAPA-202ENST00000400000 Q5XG85 94 aa8.1□□□□□ -1.11
VAPA-202ENST00000400000 REV3LO60673 3130 aa8.09□□□□□ -1.11
VAPA-202ENST00000400000 ROMO1P60602 79 aa8.08□□□□□ -1.12
VAPA-202ENST00000400000 RPL37P61927 97 aaKnown RBP8.08□□□□□ -1.12
VAPA-202ENST00000400000 Q6ZR54 194 aa8.08□□□□□ -1.12
VAPA-202ENST00000400000 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
VAPA-202ENST00000400000 VCANP13611 3396 aa8.06□□□□□ -1.12
VAPA-202ENST00000400000 STAB1Q9NY15 2570 aa8.05□□□□□ -1.12
VAPA-202ENST00000400000 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
VAPA-202ENST00000400000 SETXQ7Z333 2677 aaKnown RBP8.04□□□□□ -1.12
VAPA-202ENST00000400000 A0A0A0MQY5 61 aa8.04□□□□□ -1.12
VAPA-202ENST00000400000 CHD9Q3L8U1 2897 aa8.04□□□□□ -1.12
VAPA-202ENST00000400000 CRYBG3Q68DQ2 2970 aa8.03□□□□□ -1.12
VAPA-202ENST00000400000 SPEGQ15772 3267 aa8.02□□□□□ -1.13
VAPA-202ENST00000400000 NBEAL1Q6ZS30 2694 aa8.01□□□□□ -1.13
VAPA-202ENST00000400000 SPRR1BP22528 89 aa7.98□□□□□ -1.13
VAPA-202ENST00000400000 A8MU10 97 aa7.97□□□□□ -1.13
VAPA-202ENST00000400000 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
VAPA-202ENST00000400000 OXTP01178 125 aa7.97□□□□□ -1.13
VAPA-202ENST00000400000 MAP1AP78559 2803 aaPredicted RBP7.94□□□□□ -1.14
VAPA-202ENST00000400000 LAMA1P25391 3075 aa7.93□□□□□ -1.14
VAPA-202ENST00000400000 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
VAPA-202ENST00000400000 UNC79Q9P2D8 2635 aa7.91□□□□□ -1.14
VAPA-202ENST00000400000 DSPP15924 2871 aaKnown RBP7.9□□□□□ -1.14
VAPA-202ENST00000400000 COL6A5A8TX70 2615 aa7.89□□□□□ -1.15
VAPA-202ENST00000400000 NBEAL2Q6ZNJ1 2754 aa7.89□□□□□ -1.15
VAPA-202ENST00000400000 BAHCC1Q9P281 2608 aa7.89□□□□□ -1.15
VAPA-202ENST00000400000 DMBT1Q9UGM3 2413 aaPredicted RBP7.89□□□□□ -1.15
VAPA-202ENST00000400000 GCN1Q92616 2671 aaKnown RBP7.88□□□□□ -1.15
VAPA-202ENST00000400000 A8MUU9 505 aa7.88□□□□□ -1.15
VAPA-202ENST00000400000 KALRNO60229 2985 aa7.86□□□□□ -1.15
VAPA-202ENST00000400000 DMXL2Q8TDJ6 3036 aa7.84□□□□□ -1.15
VAPA-202ENST00000400000 SPTBN5Q9NRC6 3674 aaKnown RBP7.82□□□□□ -1.16
VAPA-202ENST00000400000 KRTAP4-16G5E9R7 235 aaPredicted RBP7.81□□□□□ -1.16
VAPA-202ENST00000400000 BOD1L1Q8NFC6 3051 aa7.8□□□□□ -1.16
VAPA-202ENST00000400000 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
VAPA-202ENST00000400000 TRANK1O15050 2925 aa7.79□□□□□ -1.16
VAPA-202ENST00000400000 LRBAP50851 2863 aa7.77□□□□□ -1.16
VAPA-202ENST00000400000 EYSQ5T1H1 3165 aa7.75□□□□□ -1.17
VAPA-202ENST00000400000 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
VAPA-202ENST00000400000 NOTCH1P46531 2555 aa7.74□□□□□ -1.17
VAPA-202ENST00000400000 STAB2Q8WWQ8 2551 aa7.74□□□□□ -1.17
VAPA-202ENST00000400000 USP34Q70CQ2 3546 aa7.74□□□□□ -1.17
VAPA-202ENST00000400000 KRTAP13-2Q52LG2 175 aa7.73□□□□□ -1.17
VAPA-202ENST00000400000 MYO15AQ9UKN7 3530 aa7.73□□□□□ -1.17
VAPA-202ENST00000400000 TACC2O95359 2948 aa7.71□□□□□ -1.17
VAPA-202ENST00000400000 ITPR2Q14571 2701 aa7.71□□□□□ -1.18
VAPA-202ENST00000400000 ZNF292O60281 2723 aa7.7□□□□□ -1.18
VAPA-202ENST00000400000 KRTAP7-1Q8IUC3 87 aa7.7□□□□□ -1.18
VAPA-202ENST00000400000 Q6ZRN7 208 aaPredicted RBP7.69□□□□□ -1.18
VAPA-202ENST00000400000 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms