RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TPRXLQ17RH7 258 aa7.96□□□□□ -1.14
HLA-DQB1-202ENST00000399079 HRCT1Q6UXD1 115 aa7.96□□□□□ -1.14
HLA-DQB1-202ENST00000399079 CEND1Q8N111 149 aa7.94□□□□□ -1.14
HLA-DQB1-202ENST00000399079 RAB37Q96AX2 223 aa7.94□□□□□ -1.14
HLA-DQB1-202ENST00000399079 A0A0G2JQZ4 141 aa7.93□□□□□ -1.14
HLA-DQB1-202ENST00000399079 hADV29S1A0JD25 119 aa7.93□□□□□ -1.14
HLA-DQB1-202ENST00000399079 FP248Q71RG6 208 aaPredicted RBP7.93□□□□□ -1.14
HLA-DQB1-202ENST00000399079 CDIP1Q9H305 208 aa7.93□□□□□ -1.14
HLA-DQB1-202ENST00000399079 Q6ZQY7 126 aa7.93□□□□□ -1.14
HLA-DQB1-202ENST00000399079 MUC2Q02817 5179 aa7.92□□□□□ -1.14
HLA-DQB1-202ENST00000399079 A0A0B4J2C4 111 aa7.92□□□□□ -1.14
HLA-DQB1-202ENST00000399079 FXYD2P54710 66 aa7.92□□□□□ -1.14
HLA-DQB1-202ENST00000399079 BVES-AS1Q5T3Y7 98 aa7.92□□□□□ -1.14
HLA-DQB1-202ENST00000399079 UQCR10Q9UDW1 63 aa7.92□□□□□ -1.14
HLA-DQB1-202ENST00000399079 M0R143 59 aa7.89□□□□□ -1.15
HLA-DQB1-202ENST00000399079 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
HLA-DQB1-202ENST00000399079 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
HLA-DQB1-202ENST00000399079 A6NJY4 79 aa7.88□□□□□ -1.15
HLA-DQB1-202ENST00000399079 PRO1854Q9UHT4 67 aa7.88□□□□□ -1.15
HLA-DQB1-202ENST00000399079 CD164Q04900 197 aa7.86□□□□□ -1.15
HLA-DQB1-202ENST00000399079 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.86□□□□□ -1.15
HLA-DQB1-202ENST00000399079 FAM218AQ96MZ4 157 aa7.86□□□□□ -1.15
HLA-DQB1-202ENST00000399079 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
HLA-DQB1-202ENST00000399079 HSD52Q0P140 79 aa7.85□□□□□ -1.15
HLA-DQB1-202ENST00000399079 F8WEM9 126 aa7.84□□□□□ -1.15
HLA-DQB1-202ENST00000399079 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
HLA-DQB1-202ENST00000399079 H0YGX0 51 aa7.83□□□□□ -1.16
HLA-DQB1-202ENST00000399079 K7ERJ3 54 aa7.83□□□□□ -1.16
HLA-DQB1-202ENST00000399079 TRIAP1O43715 76 aa7.81□□□□□ -1.16
HLA-DQB1-202ENST00000399079 OCIAD2Q56VL3 154 aa7.81□□□□□ -1.16
HLA-DQB1-202ENST00000399079 SNHG12Q9BXW3 62 aa7.81□□□□□ -1.16
HLA-DQB1-202ENST00000399079 IGLV8-61A0A075B6I0 122 aa7.8□□□□□ -1.16
HLA-DQB1-202ENST00000399079 SNCGO76070 127 aa7.79□□□□□ -1.16
HLA-DQB1-202ENST00000399079 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
HLA-DQB1-202ENST00000399079 Q5XG85 94 aa7.79□□□□□ -1.16
HLA-DQB1-202ENST00000399079 IGFL1Q6UW32 110 aa7.79□□□□□ -1.16
HLA-DQB1-202ENST00000399079 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
HLA-DQB1-202ENST00000399079 CLEC2BQ92478 149 aa7.78□□□□□ -1.16
HLA-DQB1-202ENST00000399079 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
HLA-DQB1-202ENST00000399079 H3BUT2 72 aa7.78□□□□□ -1.16
HLA-DQB1-202ENST00000399079 C1orf195Q5TG92 126 aa7.78□□□□□ -1.16
HLA-DQB1-202ENST00000399079 Q6JHZ5 121 aa7.78□□□□□ -1.16
HLA-DQB1-202ENST00000399079 PSMB2P49721 201 aa7.76□□□□□ -1.17
HLA-DQB1-202ENST00000399079 A0A1B0GX51 115 aa7.75□□□□□ -1.17
HLA-DQB1-202ENST00000399079 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
HLA-DQB1-202ENST00000399079 A0A1B0GV90 55 aa7.74□□□□□ -1.17
HLA-DQB1-202ENST00000399079 NDUFV3P56181 108 aaKnown RBP7.74□□□□□ -1.17
HLA-DQB1-202ENST00000399079 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQB1-202ENST00000399079 TCL1BO95988 128 aa7.73□□□□□ -1.17
HLA-DQB1-202ENST00000399079 BATFQ16520 125 aa7.73□□□□□ -1.17
HLA-DQB1-202ENST00000399079 TRBV7-7A0A0K0K1E9 115 aa7.73□□□□□ -1.17
HLA-DQB1-202ENST00000399079 FABP2P12104 132 aa7.73□□□□□ -1.17
HLA-DQB1-202ENST00000399079 ASB16-AS1Q495Z4 193 aa7.73□□□□□ -1.17
HLA-DQB1-202ENST00000399079 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
HLA-DQB1-202ENST00000399079 COX6CP09669 75 aa7.71□□□□□ -1.18
HLA-DQB1-202ENST00000399079 H3BMG7 143 aa7.7□□□□□ -1.18
HLA-DQB1-202ENST00000399079 DNAL4O96015 105 aa7.69□□□□□ -1.18
HLA-DQB1-202ENST00000399079 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
HLA-DQB1-202ENST00000399079 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
HLA-DQB1-202ENST00000399079 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
HLA-DQB1-202ENST00000399079 GHRHP01286 108 aa7.68□□□□□ -1.18
HLA-DQB1-202ENST00000399079 ORMDL1Q9P0S3 153 aa7.68□□□□□ -1.18
HLA-DQB1-202ENST00000399079 A0A0U1RQV1 116 aa7.66□□□□□ -1.18
HLA-DQB1-202ENST00000399079 A0A1B0GV72 72 aa7.66□□□□□ -1.18
HLA-DQB1-202ENST00000399079 SCGB1C2P0DMR2 95 aa7.66□□□□□ -1.18
HLA-DQB1-202ENST00000399079 Q6Q795 121 aa7.65□□□□□ -1.18
HLA-DQB1-202ENST00000399079 TEN1Q86WV5 123 aa7.65□□□□□ -1.18
HLA-DQB1-202ENST00000399079 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
HLA-DQB1-202ENST00000399079 TMEM256-PLSCR3K7ERE1 68 aa7.62□□□□□ -1.19
HLA-DQB1-202ENST00000399079 LST1O00453 97 aa7.62□□□□□ -1.19
HLA-DQB1-202ENST00000399079 NAA38Q9BRA0 125 aaKnown RBP7.62□□□□□ -1.19
HLA-DQB1-202ENST00000399079 A0A087WSZ3 146 aa7.62□□□□□ -1.19
HLA-DQB1-202ENST00000399079 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
HLA-DQB1-202ENST00000399079 TRACP01848 142 aa7.62□□□□□ -1.19
HLA-DQB1-202ENST00000399079 PCOTHQ58A44 107 aa7.61□□□□□ -1.19
HLA-DQB1-202ENST00000399079 H3BQ85 93 aa7.6□□□□□ -1.19
HLA-DQB1-202ENST00000399079 SS18L2Q9UHA2 77 aa7.6□□□□□ -1.19
HLA-DQB1-202ENST00000399079 ANKRD29Q8N6D5 301 aa7.59□□□□□ -1.19
HLA-DQB1-202ENST00000399079 TAX1BP3O14907 124 aa7.58□□□□□ -1.2
HLA-DQB1-202ENST00000399079 UBE2V1Q13404 147 aa7.57□□□□□ -1.2
HLA-DQB1-202ENST00000399079 Q96NJ1 140 aa7.57□□□□□ -1.2
HLA-DQB1-202ENST00000399079 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
HLA-DQB1-202ENST00000399079 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
HLA-DQB1-202ENST00000399079 BAALC-AS2P0C853 105 aa7.55□□□□□ -1.2
HLA-DQB1-202ENST00000399079 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
HLA-DQB1-202ENST00000399079 TRBV7-4A0A0J9YYF1 115 aa7.54□□□□□ -1.2
HLA-DQB1-202ENST00000399079 CCKP06307 115 aa7.54□□□□□ -1.2
HLA-DQB1-202ENST00000399079 GTF2H5Q6ZYL4 71 aa7.54□□□□□ -1.2
HLA-DQB1-202ENST00000399079 ATXN8Q156A1 80 aa7.52□□□□□ -1.2
HLA-DQB1-202ENST00000399079 RBM3P98179 157 aaKnown RBP7.52□□□□□ -1.21
HLA-DQB1-202ENST00000399079 VPS25Q9BRG1 176 aa7.5□□□□□ -1.21
HLA-DQB1-202ENST00000399079 DSCR8Q96T75 97 aa7.49□□□□□ -1.21
HLA-DQB1-202ENST00000399079 A0A1W2PPM0 123 aa7.48□□□□□ -1.21
HLA-DQB1-202ENST00000399079 DEFB116Q30KQ4 102 aa7.48□□□□□ -1.21
HLA-DQB1-202ENST00000399079 LYRM7Q5U5X0 104 aa7.48□□□□□ -1.21
HLA-DQB1-202ENST00000399079 SIGMAR1Q99720 223 aa7.48□□□□□ -1.21
HLA-DQB1-202ENST00000399079 K7EP34 96 aa7.47□□□□□ -1.21
HLA-DQB1-202ENST00000399079 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
HLA-DQB1-202ENST00000399079 LCE3BQ5TA77 95 aa7.47□□□□□ -1.21
HLA-DQB1-202ENST00000399079 C9JAW5 83 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms