RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 IGSF10Q6WRI0 2623 aa8.81□□□□□ -1
VGLL3-202ENST00000398399 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
VGLL3-202ENST00000398399 Q5VV11 94 aa8.81□□□□□ -1
VGLL3-202ENST00000398399 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
VGLL3-202ENST00000398399 IGLV7-43P04211 117 aa8.8□□□□□ -1
VGLL3-202ENST00000398399 C9orf92A6NGG3 77 aa8.8□□□□□ -1
VGLL3-202ENST00000398399 C9orf163Q8N9P6 203 aa8.8□□□□□ -1
VGLL3-202ENST00000398399 CHD9Q3L8U1 2897 aa8.8□□□□□ -1
VGLL3-202ENST00000398399 GIG44P09565 113 aaPredicted RBP8.77□□□□□ -1
VGLL3-202ENST00000398399 PSORS1C2Q9UIG4 136 aa8.76□□□□□ -1.01
VGLL3-202ENST00000398399 PRR26Q8N8Z3 221 aa8.75□□□□□ -1.01
VGLL3-202ENST00000398399 CSAG1Q6PB30 78 aa8.73□□□□□ -1.01
VGLL3-202ENST00000398399 TACC2O95359 2948 aa8.73□□□□□ -1.01
VGLL3-202ENST00000398399 A0A0G2JQZ4 141 aa8.73□□□□□ -1.01
VGLL3-202ENST00000398399 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
VGLL3-202ENST00000398399 HRES1P13985 223 aa8.73□□□□□ -1.01
VGLL3-202ENST00000398399 A0A087WTM6 91 aa8.72□□□□□ -1.01
VGLL3-202ENST00000398399 FLNCQ14315 2725 aa8.71□□□□□ -1.02
VGLL3-202ENST00000398399 KALRNO60229 2985 aa8.7□□□□□ -1.02
VGLL3-202ENST00000398399 WWC2-AS2Q96NR7 200 aa8.69□□□□□ -1.02
VGLL3-202ENST00000398399 C19orf73Q9NVV2 129 aa8.69□□□□□ -1.02
VGLL3-202ENST00000398399 CHD7Q9P2D1 2997 aa8.67□□□□□ -1.02
VGLL3-202ENST00000398399 J3QL48 77 aa8.67□□□□□ -1.02
VGLL3-202ENST00000398399 TNP2Q05952 138 aa8.66□□□□□ -1.02
VGLL3-202ENST00000398399 CAMK2N1Q7Z7J9 78 aa8.65□□□□□ -1.02
VGLL3-202ENST00000398399 TRIOO75962 3097 aa8.65□□□□□ -1.02
VGLL3-202ENST00000398399 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
VGLL3-202ENST00000398399 A0A096LNT2 108 aa8.64□□□□□ -1.03
VGLL3-202ENST00000398399 PRAC1Q96KF2 57 aa8.63□□□□□ -1.03
VGLL3-202ENST00000398399 KRTAP10-11P60412 298 aa8.62□□□□□ -1.03
VGLL3-202ENST00000398399 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
VGLL3-202ENST00000398399 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
VGLL3-202ENST00000398399 ROMO1P60602 79 aa8.61□□□□□ -1.03
VGLL3-202ENST00000398399 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
VGLL3-202ENST00000398399 ZNF575Q86XF7 245 aa8.6□□□□□ -1.03
VGLL3-202ENST00000398399 S4R3F8 94 aa8.6□□□□□ -1.03
VGLL3-202ENST00000398399 NBEAQ8NFP9 2946 aa8.59□□□□□ -1.03
VGLL3-202ENST00000398399 ASH1LQ9NR48 2969 aaKnown RBP8.58□□□□□ -1.04
VGLL3-202ENST00000398399 ZCCHC13Q8WW36 166 aaKnown RBP8.57□□□□□ -1.04
VGLL3-202ENST00000398399 SPINK7P58062 85 aa8.57□□□□□ -1.04
VGLL3-202ENST00000398399 K7EIL1 84 aa8.56□□□□□ -1.04
VGLL3-202ENST00000398399 LINC00472Q9H8W2 130 aa8.54□□□□□ -1.04
VGLL3-202ENST00000398399 Q5W150 140 aa8.53□□□□□ -1.04
VGLL3-202ENST00000398399 Q6ZSA8 131 aa8.52□□□□□ -1.05
VGLL3-202ENST00000398399 NF1P21359 2839 aa8.52□□□□□ -1.05
VGLL3-202ENST00000398399 SPRR1AP35321 89 aa8.51□□□□□ -1.05
VGLL3-202ENST00000398399 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
VGLL3-202ENST00000398399 HIVEP1P15822 2718 aa8.49□□□□□ -1.05
VGLL3-202ENST00000398399 Q6ZR54 194 aa8.48□□□□□ -1.05
VGLL3-202ENST00000398399 KRTAP16-1A8MUX0 517 aa8.48□□□□□ -1.05
VGLL3-202ENST00000398399 OXTP01178 125 aa8.48□□□□□ -1.05
VGLL3-202ENST00000398399 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
VGLL3-202ENST00000398399 CASC10Q5T4H9 136 aa8.45□□□□□ -1.06
VGLL3-202ENST00000398399 SPRR1BP22528 89 aa8.44□□□□□ -1.06
VGLL3-202ENST00000398399 TENM1Q9UKZ4 2725 aa8.43□□□□□ -1.06
VGLL3-202ENST00000398399 CELSR2Q9HCU4 2923 aa8.43□□□□□ -1.06
VGLL3-202ENST00000398399 XIRP2A4UGR9 3374 aa8.42□□□□□ -1.06
VGLL3-202ENST00000398399 R4GN34 69 aa8.42□□□□□ -1.06
VGLL3-202ENST00000398399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
VGLL3-202ENST00000398399 H1FX-AS1Q4G0G2 97 aa8.42□□□□□ -1.06
VGLL3-202ENST00000398399 WDFY4Q6ZS81 3184 aa8.41□□□□□ -1.06
VGLL3-202ENST00000398399 PRUNE2Q8WUY3 3088 aa8.4□□□□□ -1.06
VGLL3-202ENST00000398399 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
VGLL3-202ENST00000398399 COL12A1Q99715 3063 aa8.38□□□□□ -1.07
VGLL3-202ENST00000398399 RANBP2P49792 3224 aaKnown RBP8.36□□□□□ -1.07
VGLL3-202ENST00000398399 ZZEF1O43149 2961 aa8.36□□□□□ -1.07
VGLL3-202ENST00000398399 PDZD2O15018 2839 aa8.36□□□□□ -1.07
VGLL3-202ENST00000398399 SPATA8Q6RVD6 105 aa8.36□□□□□ -1.07
VGLL3-202ENST00000398399 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
VGLL3-202ENST00000398399 FREM2Q5SZK8 3169 aa8.34□□□□□ -1.07
VGLL3-202ENST00000398399 MKI67P46013 3256 aaKnown RBP8.34□□□□□ -1.07
VGLL3-202ENST00000398399 KRTAP10-3P60369 221 aa8.33□□□□□ -1.08
VGLL3-202ENST00000398399 A0A087X002 238 aa8.33□□□□□ -1.08
VGLL3-202ENST00000398399 CRYBG3Q68DQ2 2970 aa8.33□□□□□ -1.08
VGLL3-202ENST00000398399 A6NN06 94 aa8.32□□□□□ -1.08
VGLL3-202ENST00000398399 TENM3Q9P273 2699 aa8.31□□□□□ -1.08
VGLL3-202ENST00000398399 Q8NDZ9 215 aa8.3□□□□□ -1.08
VGLL3-202ENST00000398399 TNRC18O15417 2968 aaPredicted RBP8.3□□□□□ -1.08
VGLL3-202ENST00000398399 KRTAP26-1Q6PEX3 210 aa8.29□□□□□ -1.08
VGLL3-202ENST00000398399 ZANQ9Y493 2812 aa8.27□□□□□ -1.09
VGLL3-202ENST00000398399 USP34Q70CQ2 3546 aa8.27□□□□□ -1.09
VGLL3-202ENST00000398399 DMXL2Q8TDJ6 3036 aa8.27□□□□□ -1.09
VGLL3-202ENST00000398399 KRTAP25-1Q3LHN0 102 aa8.27□□□□□ -1.09
VGLL3-202ENST00000398399 LAMA1P25391 3075 aa8.26□□□□□ -1.09
VGLL3-202ENST00000398399 TGP01266 2768 aa8.25□□□□□ -1.09
VGLL3-202ENST00000398399 M0R2T5 61 aa8.24□□□□□ -1.09
VGLL3-202ENST00000398399 PANO1I0J062 215 aa8.23□□□□□ -1.09
VGLL3-202ENST00000398399 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.1
VGLL3-202ENST00000398399 M0QZ58 72 aa8.21□□□□□ -1.1
VGLL3-202ENST00000398399 REV3LO60673 3130 aa8.21□□□□□ -1.1
VGLL3-202ENST00000398399 LCE6AA0A183 80 aa8.2□□□□□ -1.1
VGLL3-202ENST00000398399 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
VGLL3-202ENST00000398399 CELSR3Q9NYQ7 3312 aa8.17□□□□□ -1.1
VGLL3-202ENST00000398399 KRTAP4-16G5E9R7 235 aaPredicted RBP8.16□□□□□ -1.1
VGLL3-202ENST00000398399 HTTP42858 3142 aa8.16□□□□□ -1.1
VGLL3-202ENST00000398399 KRTAP1-3Q8IUG1 177 aa8.16□□□□□ -1.1
VGLL3-202ENST00000398399 DCHS2Q6V1P9 2916 aa8.14□□□□□ -1.11
VGLL3-202ENST00000398399 DNAH14Q0VDD8 3507 aa8.13□□□□□ -1.11
VGLL3-202ENST00000398399 DMXL1Q9Y485 3027 aa8.13□□□□□ -1.11
VGLL3-202ENST00000398399 SRRM2Q9UQ35 2752 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms