RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 FRYQ5TBA9 3013 aa7.97□□□□□ -1.13
KCNQ3-201ENST00000388996 KLKP1Q107X0 134 aa7.97□□□□□ -1.13
KCNQ3-201ENST00000388996 MIR22HGQ0VDD5 57 aa7.96□□□□□ -1.13
KCNQ3-201ENST00000388996 TACC2O95359 2948 aa7.95□□□□□ -1.14
KCNQ3-201ENST00000388996 A8MUN3 132 aa7.95□□□□□ -1.14
KCNQ3-201ENST00000388996 CASC10Q5T4H9 136 aa7.93□□□□□ -1.14
KCNQ3-201ENST00000388996 RBM12B-AS1Q9P1G2 102 aa7.93□□□□□ -1.14
KCNQ3-201ENST00000388996 IGLV5-37A0A075B6J1 123 aa7.92□□□□□ -1.14
KCNQ3-201ENST00000388996 KRTAP1-3Q8IUG1 177 aa7.91□□□□□ -1.14
KCNQ3-201ENST00000388996 ZNF575Q86XF7 245 aa7.91□□□□□ -1.14
KCNQ3-201ENST00000388996 TENM4Q6N022 2769 aa7.91□□□□□ -1.14
KCNQ3-201ENST00000388996 ZZEF1O43149 2961 aa7.9□□□□□ -1.14
KCNQ3-201ENST00000388996 KRTAP1-1Q07627 177 aa7.89□□□□□ -1.15
KCNQ3-201ENST00000388996 Q8N1X5 172 aa7.88□□□□□ -1.15
KCNQ3-201ENST00000388996 H7BZZ5 65 aa7.88□□□□□ -1.15
KCNQ3-201ENST00000388996 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
KCNQ3-201ENST00000388996 IGLV5-48A0A075B6I7 105 aa7.87□□□□□ -1.15
KCNQ3-201ENST00000388996 RANBP2P49792 3224 aaKnown RBP7.86□□□□□ -1.15
KCNQ3-201ENST00000388996 VPS13AQ96RL7 3174 aa7.86□□□□□ -1.15
KCNQ3-201ENST00000388996 A0A0D9SG42 100 aa7.86□□□□□ -1.15
KCNQ3-201ENST00000388996 PRUNE2Q8WUY3 3088 aa7.86□□□□□ -1.15
KCNQ3-201ENST00000388996 FAM104AQ969W3 186 aa7.85□□□□□ -1.15
KCNQ3-201ENST00000388996 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
KCNQ3-201ENST00000388996 CD164Q04900 197 aa7.85□□□□□ -1.15
KCNQ3-201ENST00000388996 H3BS24 57 aa7.84□□□□□ -1.15
KCNQ3-201ENST00000388996 TNRC18O15417 2968 aaPredicted RBP7.84□□□□□ -1.15
KCNQ3-201ENST00000388996 NBEAQ8NFP9 2946 aa7.84□□□□□ -1.16
KCNQ3-201ENST00000388996 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
KCNQ3-201ENST00000388996 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
KCNQ3-201ENST00000388996 UTRNP46939 3433 aa7.82□□□□□ -1.16
KCNQ3-201ENST00000388996 CDC42SE1Q9NRR8 79 aa7.82□□□□□ -1.16
KCNQ3-201ENST00000388996 COL12A1Q99715 3063 aa7.81□□□□□ -1.16
KCNQ3-201ENST00000388996 KTN1-AS1Q86SY8 53 aa7.8□□□□□ -1.16
KCNQ3-201ENST00000388996 WDFY4Q6ZS81 3184 aa7.78□□□□□ -1.16
KCNQ3-201ENST00000388996 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
KCNQ3-201ENST00000388996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
KCNQ3-201ENST00000388996 Q6ZSA8 131 aa7.75□□□□□ -1.17
KCNQ3-201ENST00000388996 FREM2Q5SZK8 3169 aa7.74□□□□□ -1.17
KCNQ3-201ENST00000388996 TNP2Q05952 138 aa7.74□□□□□ -1.17
KCNQ3-201ENST00000388996 IGLV7-46A0A075B6I9 117 aa7.73□□□□□ -1.17
KCNQ3-201ENST00000388996 DMXL2Q8TDJ6 3036 aa7.72□□□□□ -1.17
KCNQ3-201ENST00000388996 OCR1Q9BZK8 76 aa7.72□□□□□ -1.17
KCNQ3-201ENST00000388996 PRR26Q8N8Z3 221 aa7.72□□□□□ -1.17
KCNQ3-201ENST00000388996 WIPF1O43516 503 aa7.7□□□□□ -1.18
KCNQ3-201ENST00000388996 Q1T7F1 81 aa7.69□□□□□ -1.18
KCNQ3-201ENST00000388996 LCA10Q71F78 164 aa7.69□□□□□ -1.18
KCNQ3-201ENST00000388996 VWFP04275 2813 aa7.68□□□□□ -1.18
KCNQ3-201ENST00000388996 PKD1L1Q8TDX9 2849 aa7.67□□□□□ -1.18
KCNQ3-201ENST00000388996 M0R2T5 61 aa7.66□□□□□ -1.18
KCNQ3-201ENST00000388996 FBN2P35556 2912 aa7.65□□□□□ -1.18
KCNQ3-201ENST00000388996 MXRA5Q9NR99 2828 aa7.65□□□□□ -1.19
KCNQ3-201ENST00000388996 A0A1B0GU33 70 aa7.64□□□□□ -1.19
KCNQ3-201ENST00000388996 HRES1P13985 223 aa7.64□□□□□ -1.19
KCNQ3-201ENST00000388996 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
KCNQ3-201ENST00000388996 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
KCNQ3-201ENST00000388996 ZCCHC13Q8WW36 166 aaKnown RBP7.62□□□□□ -1.19
KCNQ3-201ENST00000388996 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
KCNQ3-201ENST00000388996 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
KCNQ3-201ENST00000388996 S4R3F8 94 aa7.6□□□□□ -1.19
KCNQ3-201ENST00000388996 Q75L30 129 aa7.58□□□□□ -1.2
KCNQ3-201ENST00000388996 LAMA1P25391 3075 aa7.58□□□□□ -1.2
KCNQ3-201ENST00000388996 TGP01266 2768 aa7.58□□□□□ -1.2
KCNQ3-201ENST00000388996 HRNRQ86YZ3 2850 aaPredicted RBP7.56□□□□□ -1.2
KCNQ3-201ENST00000388996 MMP24-AS1A0A0U1RRL7 71 aa7.56□□□□□ -1.2
KCNQ3-201ENST00000388996 REV3LO60673 3130 aa7.55□□□□□ -1.2
KCNQ3-201ENST00000388996 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
KCNQ3-201ENST00000388996 HTTP42858 3142 aa7.54□□□□□ -1.2
KCNQ3-201ENST00000388996 Q5W150 140 aa7.52□□□□□ -1.21
KCNQ3-201ENST00000388996 SPRR1AP35321 89 aa7.51□□□□□ -1.21
KCNQ3-201ENST00000388996 Q5VSD8 79 aa7.49□□□□□ -1.21
KCNQ3-201ENST00000388996 Q8NDZ9 215 aa7.49□□□□□ -1.21
KCNQ3-201ENST00000388996 PRAC1Q96KF2 57 aa7.49□□□□□ -1.21
KCNQ3-201ENST00000388996 Q8N9P0 234 aaPredicted RBP7.49□□□□□ -1.21
KCNQ3-201ENST00000388996 KRTAP1-5Q9BYS1 174 aa7.49□□□□□ -1.21
KCNQ3-201ENST00000388996 ADGRG4Q8IZF6 3080 aa7.48□□□□□ -1.21
KCNQ3-201ENST00000388996 DMAC1Q96GE9 116 aa7.47□□□□□ -1.21
KCNQ3-201ENST00000388996 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
KCNQ3-201ENST00000388996 LINC00472Q9H8W2 130 aa7.46□□□□□ -1.22
KCNQ3-201ENST00000388996 ATMQ13315 3056 aa7.45□□□□□ -1.22
KCNQ3-201ENST00000388996 SPRR1BP22528 89 aa7.45□□□□□ -1.22
KCNQ3-201ENST00000388996 TENM2Q9NT68 2774 aa7.43□□□□□ -1.22
KCNQ3-201ENST00000388996 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
KCNQ3-201ENST00000388996 DMXL1Q9Y485 3027 aa7.42□□□□□ -1.22
KCNQ3-201ENST00000388996 SPINK7P58062 85 aa7.41□□□□□ -1.22
KCNQ3-201ENST00000388996 LCE6AA0A183 80 aa7.4□□□□□ -1.22
KCNQ3-201ENST00000388996 R4GN34 69 aa7.4□□□□□ -1.22
KCNQ3-201ENST00000388996 KRTAP10-1P60331 282 aa7.4□□□□□ -1.22
KCNQ3-201ENST00000388996 BOD1L1Q8NFC6 3051 aa7.39□□□□□ -1.23
KCNQ3-201ENST00000388996 LAMA3Q16787 3333 aa7.38□□□□□ -1.23
KCNQ3-201ENST00000388996 KRTAP10-2P60368 255 aa7.35□□□□□ -1.23
KCNQ3-201ENST00000388996 CELSR1Q9NYQ6 3014 aa7.34□□□□□ -1.23
KCNQ3-201ENST00000388996 Q5VV11 94 aa7.34□□□□□ -1.23
KCNQ3-201ENST00000388996 KRTAP26-1Q6PEX3 210 aa7.34□□□□□ -1.24
KCNQ3-201ENST00000388996 A0A0A0MQY5 61 aa7.33□□□□□ -1.24
KCNQ3-201ENST00000388996 MKI67P46013 3256 aaKnown RBP7.32□□□□□ -1.24
KCNQ3-201ENST00000388996 CYSTM1Q9H1C7 97 aa7.32□□□□□ -1.24
KCNQ3-201ENST00000388996 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
KCNQ3-201ENST00000388996 Q5XG85 94 aa7.31□□□□□ -1.24
KCNQ3-201ENST00000388996 M0QZ58 72 aa7.29□□□□□ -1.24
KCNQ3-201ENST00000388996 BRCA2P51587 3418 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms