RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 H0YGX0 51 aa7.5□□□□□ -1.21
SMN1-202ENST00000380707 SLC25A20O43772 301 aa7.5□□□□□ -1.21
SMN1-202ENST00000380707 PSMB2P49721 201 aa7.5□□□□□ -1.21
SMN1-202ENST00000380707 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
SMN1-202ENST00000380707 FAM218AQ96MZ4 157 aa7.5□□□□□ -1.21
SMN1-202ENST00000380707 CRYGAP11844 174 aa7.49□□□□□ -1.21
SMN1-202ENST00000380707 KRTAP13-2Q52LG2 175 aa7.49□□□□□ -1.21
SMN1-202ENST00000380707 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
SMN1-202ENST00000380707 DEFB105AQ8NG35 78 aa7.47□□□□□ -1.21
SMN1-202ENST00000380707 LINC01547P58512 204 aaPredicted RBP7.47□□□□□ -1.21
SMN1-202ENST00000380707 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
SMN1-202ENST00000380707 SNHG12Q9BXW3 62 aa7.47□□□□□ -1.21
SMN1-202ENST00000380707 IGLV5-48A0A075B6I7 105 aa7.46□□□□□ -1.22
SMN1-202ENST00000380707 COX6CP09669 75 aa7.46□□□□□ -1.22
SMN1-202ENST00000380707 SPRR1BP22528 89 aa7.46□□□□□ -1.22
SMN1-202ENST00000380707 Q6ZQY7 126 aa7.46□□□□□ -1.22
SMN1-202ENST00000380707 C3orf22Q8N5N4 141 aa7.46□□□□□ -1.22
SMN1-202ENST00000380707 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.22
SMN1-202ENST00000380707 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
SMN1-202ENST00000380707 SCGB1C2P0DMR2 95 aa7.44□□□□□ -1.22
SMN1-202ENST00000380707 Q8N377 158 aa7.44□□□□□ -1.22
SMN1-202ENST00000380707 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
SMN1-202ENST00000380707 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.43□□□□□ -1.22
SMN1-202ENST00000380707 IGLV9-49A0A0B4J1Y8 123 aa7.42□□□□□ -1.22
SMN1-202ENST00000380707 A0A1B0GX51 115 aa7.42□□□□□ -1.22
SMN1-202ENST00000380707 TAX1BP3O14907 124 aa7.42□□□□□ -1.22
SMN1-202ENST00000380707 SNCGO76070 127 aa7.42□□□□□ -1.22
SMN1-202ENST00000380707 SMIM29Q86T20 159 aa7.42□□□□□ -1.22
SMN1-202ENST00000380707 H3BUT2 72 aa7.4□□□□□ -1.22
SMN1-202ENST00000380707 MOBPQ13875 183 aa7.4□□□□□ -1.22
SMN1-202ENST00000380707 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
SMN1-202ENST00000380707 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
SMN1-202ENST00000380707 LST1O00453 97 aa7.39□□□□□ -1.23
SMN1-202ENST00000380707 OCIAD2Q56VL3 154 aa7.38□□□□□ -1.23
SMN1-202ENST00000380707 C9orf153Q5TBE3 101 aa7.38□□□□□ -1.23
SMN1-202ENST00000380707 TCL1BO95988 128 aa7.37□□□□□ -1.23
SMN1-202ENST00000380707 DNAL4O96015 105 aa7.37□□□□□ -1.23
SMN1-202ENST00000380707 COL5A1-AS1Q5SY13 56 aa7.37□□□□□ -1.23
SMN1-202ENST00000380707 Q8NBF4 154 aa7.37□□□□□ -1.23
SMN1-202ENST00000380707 TRACP01848 142 aa7.37□□□□□ -1.23
SMN1-202ENST00000380707 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
SMN1-202ENST00000380707 PPDPFLQ8WWR9 84 aa7.37□□□□□ -1.23
SMN1-202ENST00000380707 LINC00304Q8N9R0 145 aa7.36□□□□□ -1.23
SMN1-202ENST00000380707 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
SMN1-202ENST00000380707 KRTAP4-11Q9BYQ6 195 aa7.35□□□□□ -1.23
SMN1-202ENST00000380707 ORMDL1Q9P0S3 153 aa7.35□□□□□ -1.23
SMN1-202ENST00000380707 HMCN2Q8NDA2 5059 aa7.34□□□□□ -1.23
SMN1-202ENST00000380707 ATXN8Q156A1 80 aa7.34□□□□□ -1.23
SMN1-202ENST00000380707 FABP2P12104 132 aa7.33□□□□□ -1.24
SMN1-202ENST00000380707 LYRM7Q5U5X0 104 aa7.33□□□□□ -1.24
SMN1-202ENST00000380707 TRBV20-1A0A075B6N2 111 aa7.32□□□□□ -1.24
SMN1-202ENST00000380707 A0A0G2JQZ4 141 aa7.32□□□□□ -1.24
SMN1-202ENST00000380707 F8WEM9 126 aa7.32□□□□□ -1.24
SMN1-202ENST00000380707 NDUFV3P56181 108 aaKnown RBP7.32□□□□□ -1.24
SMN1-202ENST00000380707 IGLV8-61A0A075B6I0 122 aa7.3□□□□□ -1.24
SMN1-202ENST00000380707 H3BQ85 93 aa7.3□□□□□ -1.24
SMN1-202ENST00000380707 TMEM256-PLSCR3K7ERE1 68 aa7.3□□□□□ -1.24
SMN1-202ENST00000380707 SPAG11AQ6PDA7 123 aa7.3□□□□□ -1.24
SMN1-202ENST00000380707 BAALC-AS2P0C853 105 aa7.28□□□□□ -1.24
SMN1-202ENST00000380707 H3BMG7 143 aa7.27□□□□□ -1.25
SMN1-202ENST00000380707 SPINK1P00995 79 aa7.27□□□□□ -1.25
SMN1-202ENST00000380707 HRCT1Q6UXD1 115 aa7.27□□□□□ -1.25
SMN1-202ENST00000380707 UBE2V1Q13404 147 aa7.27□□□□□ -1.25
SMN1-202ENST00000380707 IGFL1Q6UW32 110 aa7.27□□□□□ -1.25
SMN1-202ENST00000380707 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.25
SMN1-202ENST00000380707 A0A1B0GV72 72 aa7.26□□□□□ -1.25
SMN1-202ENST00000380707 C9JAW5 83 aa7.26□□□□□ -1.25
SMN1-202ENST00000380707 Q6JHZ5 121 aa7.26□□□□□ -1.25
SMN1-202ENST00000380707 ANKRD29Q8N6D5 301 aa7.25□□□□□ -1.25
SMN1-202ENST00000380707 CD164Q04900 197 aa7.24□□□□□ -1.25
SMN1-202ENST00000380707 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
SMN1-202ENST00000380707 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
SMN1-202ENST00000380707 K7EP34 96 aa7.22□□□□□ -1.25
SMN1-202ENST00000380707 RETNLBQ9BQ08 111 aa7.22□□□□□ -1.25
SMN1-202ENST00000380707 LPAP08519 4548 aa7.21□□□□□ -1.26
SMN1-202ENST00000380707 RBM3P98179 157 aaKnown RBP7.19□□□□□ -1.26
SMN1-202ENST00000380707 LRP2P98164 4655 aa7.19□□□□□ -1.26
SMN1-202ENST00000380707 H3BT86 120 aa7.18□□□□□ -1.26
SMN1-202ENST00000380707 TRBV7-4A0A0J9YYF1 115 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 TRBV7-7A0A0K0K1E9 115 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 A0A1W2PNM2 257 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 Q6Q795 121 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 TEN1Q86WV5 123 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 PRR4Q16378 134 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 Q5XG85 94 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 PRO0461Q9UI25 63 aa7.17□□□□□ -1.26
SMN1-202ENST00000380707 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
SMN1-202ENST00000380707 GTF2H5Q6ZYL4 71 aa7.16□□□□□ -1.26
SMN1-202ENST00000380707 OBSCN-AS1Q96MR7 158 aa7.16□□□□□ -1.26
SMN1-202ENST00000380707 DSCR8Q96T75 97 aa7.16□□□□□ -1.26
SMN1-202ENST00000380707 CCKP06307 115 aa7.14□□□□□ -1.27
SMN1-202ENST00000380707 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
SMN1-202ENST00000380707 A0A087WSZ3 146 aa7.11□□□□□ -1.27
SMN1-202ENST00000380707 C1orf195Q5TG92 126 aa7.11□□□□□ -1.27
SMN1-202ENST00000380707 Q6ZQT0 140 aa7.11□□□□□ -1.27
SMN1-202ENST00000380707 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
SMN1-202ENST00000380707 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
SMN1-202ENST00000380707 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
SMN1-202ENST00000380707 UBR4Q5T4S7 5183 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 272.6 ms