RNA–Protein interactions for RNA: ENST00000379997.7

C9orf72-202, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2 BASIC

Gene C9orf72, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-202ENST00000379997 IGKCP01834 107 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 PLNP26678 52 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 UBE2D3P61077 147 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 UBE2D2P62837 147 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 RPL39P62891 51 aaKnown RBP1.58□□□□□ -2.16
C9orf72-202ENST00000379997 MRPS36P82909 103 aaKnown RBP1.58□□□□□ -2.16
C9orf72-202ENST00000379997 DEFB121Q5J5C9 76 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 SBSPONQ8IVN8 264 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 AMELXQ99217 191 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 C2orf88Q9BSF0 95 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 SNHG12Q9BXW3 62 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 UBE2D4Q9Y2X8 147 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 PKD1P98161 4303 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 TRGV2A0A075B6R0 118 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 IGKV2D-26A0A0A0MRZ7 120 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 IBA57-AS1B1ANH7 110 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 M0R143 59 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 MIFP14174 115 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 SPANXA1Q9NS26 97 aa1.58□□□□□ -2.16
C9orf72-202ENST00000379997 DEFB135Q30KP9 77 aa1.57□□□□□ -2.16
C9orf72-202ENST00000379997 C7orf65Q6ZTY9 151 aa1.57□□□□□ -2.16
C9orf72-202ENST00000379997 DEFB104AQ8WTQ1 72 aa1.57□□□□□ -2.16
C9orf72-202ENST00000379997 PRADC1Q9BSG0 188 aa1.57□□□□□ -2.16
C9orf72-202ENST00000379997 HIGD1BQ9P298 99 aa1.57□□□□□ -2.16
C9orf72-202ENST00000379997 PRO0255Q9UI72 69 aa1.57□□□□□ -2.16
C9orf72-202ENST00000379997 TRBV25-1A0A075B6N4 114 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 TRBV6-8A0A0A6YYG3 113 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 H3BNG1 76 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 SPART-AS1P0CW21 52 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 DEFB130BP0DP73 79 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 DEFB130AP0DP74 79 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 CRYGAP11844 174 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 ZNF25P17030 456 aaPredicted RBP1.56□□□□□ -2.16
C9orf72-202ENST00000379997 UBE2D1P51668 147 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 FXYD2P54710 66 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 BVES-AS1Q5T3Y7 98 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 COA5Q86WW8 74 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 CDC42SE2Q9NRR3 84 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.56□□□□□ -2.16
C9orf72-202ENST00000379997 MYMXA0A1B0GTQ4 84 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 IGKV2-29A2NJV5 120 aaPredicted RBP1.56□□□□□ -2.16
C9orf72-202ENST00000379997 DEFB4AO15263 64 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 HSD52Q0P140 79 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 COL5A1-AS1Q5SY13 56 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 Q6ZUT4 128 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 ATP6V0E2Q8NHE4 81 aa1.56□□□□□ -2.16
C9orf72-202ENST00000379997 IGHV1-58A0A0C4DH39 117 aa1.55□□□□□ -2.16
C9orf72-202ENST00000379997 A0A0J9YY99 117 aa1.55□□□□□ -2.16
C9orf72-202ENST00000379997 SEC11AP67812 179 aa1.55□□□□□ -2.16
C9orf72-202ENST00000379997 COX6A2Q02221 97 aa1.55□□□□□ -2.16
C9orf72-202ENST00000379997 TMEM170BQ5T4T1 132 aa1.55□□□□□ -2.16
C9orf72-202ENST00000379997 OR5A1Q8NGJ0 315 aa1.55□□□□□ -2.16
C9orf72-202ENST00000379997 CDKN2A-AS1Q9UH64 79 aa1.55□□□□□ -2.16
C9orf72-202ENST00000379997 A0A096LPF7 62 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 A0A1B0GV90 55 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 TAX1BP3O14907 124 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 CCL25O15444 150 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 TCTAP57738 103 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 LINC01554Q52M75 96 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 LYPD5Q6UWN5 251 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 Q6ZQT0 140 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 C10orf126Q8N4M7 172 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 PLEKHB2Q96CS7 222 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 TRAV13-1A0A0B4J241 112 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 LINC00959A0A1B0GUT2 108 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 ZNF815PA8K554 130 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 H3BRM9 83 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 K7EP13 123 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 TIMM17BO60830 172 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 LY6G6CO95867 125 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 IGHV3-30P01768 117 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 IGHV3-30-5P0DP03 117 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 Q1T7F1 81 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 Q6Q795 121 aa1.54□□□□□ -2.16
C9orf72-202ENST00000379997 NDUFA1O15239 70 aa1.53□□□□□ -2.16
C9orf72-202ENST00000379997 SPINK8P0C7L1 97 aa1.53□□□□□ -2.16
C9orf72-202ENST00000379997 NDUFA12Q9UI09 145 aa1.53□□□□□ -2.16
C9orf72-202ENST00000379997 LRP1Q07954 4544 aaKnown RBP1.53□□□□□ -2.16
C9orf72-202ENST00000379997 USH2AO75445 5202 aa1.53□□□□□ -2.17
C9orf72-202ENST00000379997 DEFB131BA0A096LNP1 70 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 SMIM13P0DJ93 91 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 ESRGQ1W209 222 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 KRTAP26-1Q6PEX3 210 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 LCA10Q71F78 164 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 FP248Q71RG6 208 aaPredicted RBP1.52□□□□□ -2.17
C9orf72-202ENST00000379997 LINC00269Q8N2A0 174 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 SPANXDQ9BXN6 97 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 SPANXCQ9NY87 97 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 TRAV10A0A0B4J240 114 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 LOC107984156A0A0G2JMH3 177 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 A0A1W2PPM0 123 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 TMEM238C9JI98 176 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 TMEM262E9PQX1 116 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 K7ERJ3 54 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 CRPP02741 224 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 IFITM1P13164 125 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 HTN3P15516 51 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 LINC01556Q5JQF7 62 aa1.52□□□□□ -2.17
C9orf72-202ENST00000379997 SFTA2Q6UW10 78 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms