RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 Q8N1X5 172 aa7.36□□□□□ -1.23
PTCHD1-201ENST00000379361 LCA10Q71F78 164 aa7.36□□□□□ -1.23
PTCHD1-201ENST00000379361 S4R3F8 94 aa7.35□□□□□ -1.23
PTCHD1-201ENST00000379361 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
PTCHD1-201ENST00000379361 GOLGB1Q14789 3259 aaKnown RBP7.34□□□□□ -1.23
PTCHD1-201ENST00000379361 PRUNE2Q8WUY3 3088 aa7.34□□□□□ -1.23
PTCHD1-201ENST00000379361 COL12A1Q99715 3063 aa7.34□□□□□ -1.23
PTCHD1-201ENST00000379361 DCHS2Q6V1P9 2916 aa7.34□□□□□ -1.23
PTCHD1-201ENST00000379361 TENM3Q9P273 2699 aa7.33□□□□□ -1.24
PTCHD1-201ENST00000379361 SPRR4Q96PI1 79 aa7.33□□□□□ -1.24
PTCHD1-201ENST00000379361 SMCPP49901 116 aaPredicted RBP7.33□□□□□ -1.24
PTCHD1-201ENST00000379361 TACC2O95359 2948 aa7.32□□□□□ -1.24
PTCHD1-201ENST00000379361 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
PTCHD1-201ENST00000379361 NBEAQ8NFP9 2946 aa7.32□□□□□ -1.24
PTCHD1-201ENST00000379361 KRTAP10-11P60412 298 aa7.31□□□□□ -1.24
PTCHD1-201ENST00000379361 PRR34Q9NV39 138 aa7.31□□□□□ -1.24
PTCHD1-201ENST00000379361 PRO0461Q9UI25 63 aa7.31□□□□□ -1.24
PTCHD1-201ENST00000379361 A0A1B0GU33 70 aa7.29□□□□□ -1.24
PTCHD1-201ENST00000379361 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
PTCHD1-201ENST00000379361 ANAPC11Q9NYG5 84 aa7.29□□□□□ -1.24
PTCHD1-201ENST00000379361 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
PTCHD1-201ENST00000379361 PDZD2O15018 2839 aa7.29□□□□□ -1.24
PTCHD1-201ENST00000379361 C19orf73Q9NVV2 129 aa7.28□□□□□ -1.24
PTCHD1-201ENST00000379361 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
PTCHD1-201ENST00000379361 Q8N377 158 aa7.28□□□□□ -1.24
PTCHD1-201ENST00000379361 VPS13AQ96RL7 3174 aa7.27□□□□□ -1.25
PTCHD1-201ENST00000379361 LAMA1P25391 3075 aa7.26□□□□□ -1.25
PTCHD1-201ENST00000379361 C10orf142B7Z368 130 aa7.25□□□□□ -1.25
PTCHD1-201ENST00000379361 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
PTCHD1-201ENST00000379361 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
PTCHD1-201ENST00000379361 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
PTCHD1-201ENST00000379361 H7BZZ5 65 aa7.23□□□□□ -1.25
PTCHD1-201ENST00000379361 PCNTO95613 3336 aa7.23□□□□□ -1.25
PTCHD1-201ENST00000379361 LITAFQ99732 161 aa7.22□□□□□ -1.25
PTCHD1-201ENST00000379361 FAM229BQ4G0N7 80 aa7.2□□□□□ -1.26
PTCHD1-201ENST00000379361 LINC00612Q8N6U2 182 aa7.2□□□□□ -1.26
PTCHD1-201ENST00000379361 WDFY4Q6ZS81 3184 aa7.2□□□□□ -1.26
PTCHD1-201ENST00000379361 PKD1L1Q8TDX9 2849 aa7.2□□□□□ -1.26
PTCHD1-201ENST00000379361 FREM2Q5SZK8 3169 aa7.18□□□□□ -1.26
PTCHD1-201ENST00000379361 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
PTCHD1-201ENST00000379361 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
PTCHD1-201ENST00000379361 A0A0G2JQZ4 141 aa7.15□□□□□ -1.26
PTCHD1-201ENST00000379361 R4GN34 69 aa7.15□□□□□ -1.26
PTCHD1-201ENST00000379361 CASC10Q5T4H9 136 aa7.15□□□□□ -1.26
PTCHD1-201ENST00000379361 SPINK7P58062 85 aa7.15□□□□□ -1.27
PTCHD1-201ENST00000379361 REV3LO60673 3130 aa7.15□□□□□ -1.27
PTCHD1-201ENST00000379361 KLK9Q2XQG4 91 aa7.14□□□□□ -1.27
PTCHD1-201ENST00000379361 VWFP04275 2813 aa7.13□□□□□ -1.27
PTCHD1-201ENST00000379361 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
PTCHD1-201ENST00000379361 GIG44P09565 113 aaPredicted RBP7.1□□□□□ -1.27
PTCHD1-201ENST00000379361 Q75L30 129 aa7.1□□□□□ -1.27
PTCHD1-201ENST00000379361 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
PTCHD1-201ENST00000379361 TNP2Q05952 138 aa7.08□□□□□ -1.28
PTCHD1-201ENST00000379361 HTTP42858 3142 aa7.07□□□□□ -1.28
PTCHD1-201ENST00000379361 SRRM2Q9UQ35 2752 aaKnown RBP7.07□□□□□ -1.28
PTCHD1-201ENST00000379361 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
PTCHD1-201ENST00000379361 CELSR1Q9NYQ6 3014 aa7.04□□□□□ -1.28
PTCHD1-201ENST00000379361 Q5VSD8 79 aa7.04□□□□□ -1.28
PTCHD1-201ENST00000379361 DMXL1Q9Y485 3027 aa7.02□□□□□ -1.29
PTCHD1-201ENST00000379361 A0A1W2PNM2 257 aa7.01□□□□□ -1.29
PTCHD1-201ENST00000379361 WIPF1O43516 503 aa7.01□□□□□ -1.29
PTCHD1-201ENST00000379361 ATMQ13315 3056 aa7□□□□□ -1.29
PTCHD1-201ENST00000379361 ADGRG4Q8IZF6 3080 aa6.99□□□□□ -1.29
PTCHD1-201ENST00000379361 OXTP01178 125 aa6.99□□□□□ -1.29
PTCHD1-201ENST00000379361 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
PTCHD1-201ENST00000379361 M0QZ58 72 aa6.98□□□□□ -1.29
PTCHD1-201ENST00000379361 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
PTCHD1-201ENST00000379361 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
PTCHD1-201ENST00000379361 ROMO1P60602 79 aa6.97□□□□□ -1.29
PTCHD1-201ENST00000379361 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
PTCHD1-201ENST00000379361 TGP01266 2768 aa6.96□□□□□ -1.29
PTCHD1-201ENST00000379361 BOD1L1Q8NFC6 3051 aa6.96□□□□□ -1.3
PTCHD1-201ENST00000379361 ZANQ9Y493 2812 aa6.95□□□□□ -1.3
PTCHD1-201ENST00000379361 KRTAP10-3P60369 221 aa6.94□□□□□ -1.3
PTCHD1-201ENST00000379361 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
PTCHD1-201ENST00000379361 Q5W150 140 aa6.92□□□□□ -1.3
PTCHD1-201ENST00000379361 FBN2P35556 2912 aa6.91□□□□□ -1.3
PTCHD1-201ENST00000379361 PLAC8Q9NZF1 115 aa6.91□□□□□ -1.3
PTCHD1-201ENST00000379361 H3BS24 57 aa6.91□□□□□ -1.3
PTCHD1-201ENST00000379361 A0A096LNT2 108 aa6.9□□□□□ -1.3
PTCHD1-201ENST00000379361 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
PTCHD1-201ENST00000379361 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
PTCHD1-201ENST00000379361 MXRA5Q9NR99 2828 aa6.84□□□□□ -1.31
PTCHD1-201ENST00000379361 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
PTCHD1-201ENST00000379361 UTRNP46939 3433 aa6.83□□□□□ -1.32
PTCHD1-201ENST00000379361 LCE6AA0A183 80 aa6.81□□□□□ -1.32
PTCHD1-201ENST00000379361 COL7A1Q02388 2944 aa6.8□□□□□ -1.32
PTCHD1-201ENST00000379361 PRAC1Q96KF2 57 aa6.79□□□□□ -1.32
PTCHD1-201ENST00000379361 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
PTCHD1-201ENST00000379361 PANO1I0J062 215 aa6.78□□□□□ -1.32
PTCHD1-201ENST00000379361 KRTAP1-3Q8IUG1 177 aa6.77□□□□□ -1.33
PTCHD1-201ENST00000379361 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
PTCHD1-201ENST00000379361 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
PTCHD1-201ENST00000379361 Q5VV11 94 aa6.75□□□□□ -1.33
PTCHD1-201ENST00000379361 KRTAP1-1Q07627 177 aa6.73□□□□□ -1.33
PTCHD1-201ENST00000379361 RANBP2P49792 3224 aaKnown RBP6.72□□□□□ -1.33
PTCHD1-201ENST00000379361 LINC00472Q9H8W2 130 aa6.72□□□□□ -1.33
PTCHD1-201ENST00000379361 SPRR1BP22528 89 aa6.72□□□□□ -1.33
PTCHD1-201ENST00000379361 COL6A3P12111 3177 aa6.7□□□□□ -1.34
PTCHD1-201ENST00000379361 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms