RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CEP295Q9C0D2 2601 aa7.98□□□□□ -1.13
HIPK3-202ENST00000379016 PLAC8Q9NZF1 115 aa7.97□□□□□ -1.13
HIPK3-202ENST00000379016 Q5XG85 94 aa7.96□□□□□ -1.13
HIPK3-202ENST00000379016 STAB1Q9NY15 2570 aa7.96□□□□□ -1.13
HIPK3-202ENST00000379016 UTRNP46939 3433 aa7.95□□□□□ -1.14
HIPK3-202ENST00000379016 A8MUU9 505 aa7.95□□□□□ -1.14
HIPK3-202ENST00000379016 PRRC2CQ9Y520 2896 aaKnown RBP7.95□□□□□ -1.14
HIPK3-202ENST00000379016 OXTP01178 125 aa7.95□□□□□ -1.14
HIPK3-202ENST00000379016 CEP350Q5VT06 3117 aa7.93□□□□□ -1.14
HIPK3-202ENST00000379016 HECTD1Q9ULT8 2610 aa7.92□□□□□ -1.14
HIPK3-202ENST00000379016 SPRR1BP22528 89 aa7.91□□□□□ -1.14
HIPK3-202ENST00000379016 CFAP46Q8IYW2 2715 aa7.91□□□□□ -1.14
HIPK3-202ENST00000379016 P0C880 135 aa7.91□□□□□ -1.14
HIPK3-202ENST00000379016 A0A096LNT2 108 aa7.89□□□□□ -1.15
HIPK3-202ENST00000379016 PANO1I0J062 215 aa7.89□□□□□ -1.15
HIPK3-202ENST00000379016 Q6ZR54 194 aa7.88□□□□□ -1.15
HIPK3-202ENST00000379016 A8MU10 97 aa7.88□□□□□ -1.15
HIPK3-202ENST00000379016 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
HIPK3-202ENST00000379016 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
HIPK3-202ENST00000379016 TNP1P09430 55 aa7.85□□□□□ -1.15
HIPK3-202ENST00000379016 LINC00472Q9H8W2 130 aa7.85□□□□□ -1.15
HIPK3-202ENST00000379016 KRTAP25-1Q3LHN0 102 aa7.84□□□□□ -1.15
HIPK3-202ENST00000379016 C5orf42Q9H799 3197 aa7.83□□□□□ -1.16
HIPK3-202ENST00000379016 KRTAP10-1P60331 282 aa7.82□□□□□ -1.16
HIPK3-202ENST00000379016 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
HIPK3-202ENST00000379016 AKAP13Q12802 2813 aa7.81□□□□□ -1.16
HIPK3-202ENST00000379016 KRTAP26-1Q6PEX3 210 aa7.8□□□□□ -1.16
HIPK3-202ENST00000379016 ATRQ13535 2644 aa7.8□□□□□ -1.16
HIPK3-202ENST00000379016 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
HIPK3-202ENST00000379016 DNAH12Q6ZR08 3092 aa7.79□□□□□ -1.16
HIPK3-202ENST00000379016 STAB2Q8WWQ8 2551 aa7.77□□□□□ -1.17
HIPK3-202ENST00000379016 MAST4O15021 2626 aa7.74□□□□□ -1.17
HIPK3-202ENST00000379016 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
HIPK3-202ENST00000379016 FLNBO75369 2602 aaKnown RBP7.74□□□□□ -1.17
HIPK3-202ENST00000379016 NBEAL1Q6ZS30 2694 aa7.72□□□□□ -1.17
HIPK3-202ENST00000379016 LCE6AA0A183 80 aa7.7□□□□□ -1.18
HIPK3-202ENST00000379016 KRTAP1-5Q9BYS1 174 aa7.69□□□□□ -1.18
HIPK3-202ENST00000379016 ASB16-AS1Q495Z4 193 aa7.67□□□□□ -1.18
HIPK3-202ENST00000379016 SPRR1AP35321 89 aa7.66□□□□□ -1.18
HIPK3-202ENST00000379016 A0A087X002 238 aa7.64□□□□□ -1.19
HIPK3-202ENST00000379016 ITPR3Q14573 2671 aa7.63□□□□□ -1.19
HIPK3-202ENST00000379016 PCNTO95613 3336 aa7.62□□□□□ -1.19
HIPK3-202ENST00000379016 A0A1B0GVY2 172 aa7.6□□□□□ -1.19
HIPK3-202ENST00000379016 BAHCC1Q9P281 2608 aa7.6□□□□□ -1.19
HIPK3-202ENST00000379016 CENPEQ02224 2701 aa7.6□□□□□ -1.19
HIPK3-202ENST00000379016 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
HIPK3-202ENST00000379016 NOTCH1P46531 2555 aa7.55□□□□□ -1.2
HIPK3-202ENST00000379016 CFAP54Q96N23 3096 aa7.54□□□□□ -1.2
HIPK3-202ENST00000379016 HELZ2Q9BYK8 2649 aaKnown RBP7.54□□□□□ -1.2
HIPK3-202ENST00000379016 FREM2Q5SZK8 3169 aa7.5□□□□□ -1.21
HIPK3-202ENST00000379016 A0A0C4DFX4 3053 aa7.49□□□□□ -1.21
HIPK3-202ENST00000379016 FLNAP21333 2647 aaKnown RBP7.48□□□□□ -1.21
HIPK3-202ENST00000379016 XIRP2A4UGR9 3374 aa7.47□□□□□ -1.21
HIPK3-202ENST00000379016 CHD6Q8TD26 2715 aa7.47□□□□□ -1.21
HIPK3-202ENST00000379016 A6NN06 94 aa7.46□□□□□ -1.21
HIPK3-202ENST00000379016 TEX15Q9BXT5 2789 aa7.43□□□□□ -1.22
HIPK3-202ENST00000379016 LAMA2P24043 3122 aaKnown RBP7.42□□□□□ -1.22
HIPK3-202ENST00000379016 KRTAP4-16G5E9R7 235 aaPredicted RBP7.42□□□□□ -1.22
HIPK3-202ENST00000379016 COL6A5A8TX70 2615 aa7.41□□□□□ -1.22
HIPK3-202ENST00000379016 KRTAP11-1Q8IUC1 163 aa7.38□□□□□ -1.23
HIPK3-202ENST00000379016 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
HIPK3-202ENST00000379016 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
HIPK3-202ENST00000379016 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
HIPK3-202ENST00000379016 MKI67P46013 3256 aaKnown RBP7.35□□□□□ -1.23
HIPK3-202ENST00000379016 PRO2289Q9P1D8 64 aa7.35□□□□□ -1.23
HIPK3-202ENST00000379016 UNC79Q9P2D8 2635 aa7.35□□□□□ -1.23
HIPK3-202ENST00000379016 CELSR3Q9NYQ7 3312 aa7.34□□□□□ -1.23
HIPK3-202ENST00000379016 REV3LO60673 3130 aa7.34□□□□□ -1.24
HIPK3-202ENST00000379016 NSD1Q96L73 2696 aaPredicted RBP7.31□□□□□ -1.24
HIPK3-202ENST00000379016 SETXQ7Z333 2677 aaKnown RBP7.29□□□□□ -1.24
HIPK3-202ENST00000379016 TEP1Q99973 2627 aaKnown RBP7.28□□□□□ -1.24
HIPK3-202ENST00000379016 IGSF10Q6WRI0 2623 aa7.25□□□□□ -1.25
HIPK3-202ENST00000379016 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
HIPK3-202ENST00000379016 TRIOO75962 3097 aa7.24□□□□□ -1.25
HIPK3-202ENST00000379016 BRCA2P51587 3418 aa7.23□□□□□ -1.25
HIPK3-202ENST00000379016 FRYQ5TBA9 3013 aa7.23□□□□□ -1.25
HIPK3-202ENST00000379016 Q6ZRN7 208 aaPredicted RBP7.2□□□□□ -1.26
HIPK3-202ENST00000379016 CRYBG3Q68DQ2 2970 aa7.18□□□□□ -1.26
HIPK3-202ENST00000379016 LAMA3Q16787 3333 aa7.17□□□□□ -1.26
HIPK3-202ENST00000379016 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
HIPK3-202ENST00000379016 MGAQ8IWI9 3026 aa7.16□□□□□ -1.26
HIPK3-202ENST00000379016 PRUNE2Q8WUY3 3088 aa7.14□□□□□ -1.27
HIPK3-202ENST00000379016 KMT2BQ9UMN6 2715 aaPredicted RBP7.14□□□□□ -1.27
HIPK3-202ENST00000379016 WDFY4Q6ZS81 3184 aa7.12□□□□□ -1.27
HIPK3-202ENST00000379016 RANBP2P49792 3224 aaKnown RBP7.1□□□□□ -1.27
HIPK3-202ENST00000379016 UNC80Q8N2C7 3258 aa7.07□□□□□ -1.28
HIPK3-202ENST00000379016 NBEAL2Q6ZNJ1 2754 aa7.06□□□□□ -1.28
HIPK3-202ENST00000379016 VPS13AQ96RL7 3174 aa7.05□□□□□ -1.28
HIPK3-202ENST00000379016 CFAP47Q6ZTR5 3102 aa7.05□□□□□ -1.28
HIPK3-202ENST00000379016 APCP25054 2843 aa7.04□□□□□ -1.28
HIPK3-202ENST00000379016 CHD7Q9P2D1 2997 aa7.04□□□□□ -1.28
HIPK3-202ENST00000379016 GCN1Q92616 2671 aaKnown RBP7.04□□□□□ -1.28
HIPK3-202ENST00000379016 DNAH14Q0VDD8 3507 aa7□□□□□ -1.29
HIPK3-202ENST00000379016 H0YAA0 97 aa6.99□□□□□ -1.29
HIPK3-202ENST00000379016 VCANP13611 3396 aa6.99□□□□□ -1.29
HIPK3-202ENST00000379016 SZT2Q5T011 3432 aa6.99□□□□□ -1.29
HIPK3-202ENST00000379016 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
HIPK3-202ENST00000379016 XP32Q5T750 250 aa6.97□□□□□ -1.29
HIPK3-202ENST00000379016 ITPR2Q14571 2701 aa6.97□□□□□ -1.29
HIPK3-202ENST00000379016 CDH23Q9H251 3354 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms