RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
TRIM13-202ENST00000378182 CFAP54Q96N23 3096 aa8.51□□□□□ -1.05
TRIM13-202ENST00000378182 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
TRIM13-202ENST00000378182 PRAC1Q96KF2 57 aa8.48□□□□□ -1.05
TRIM13-202ENST00000378182 OXTP01178 125 aa8.47□□□□□ -1.05
TRIM13-202ENST00000378182 FLNBO75369 2602 aaKnown RBP8.45□□□□□ -1.06
TRIM13-202ENST00000378182 ITPR3Q14573 2671 aa8.44□□□□□ -1.06
TRIM13-202ENST00000378182 Q8NDZ9 215 aa8.44□□□□□ -1.06
TRIM13-202ENST00000378182 CELSR3Q9NYQ7 3312 aa8.43□□□□□ -1.06
TRIM13-202ENST00000378182 Q75L30 129 aa8.42□□□□□ -1.06
TRIM13-202ENST00000378182 FLNAP21333 2647 aaKnown RBP8.42□□□□□ -1.06
TRIM13-202ENST00000378182 A0A0A0MQY5 61 aa8.4□□□□□ -1.06
TRIM13-202ENST00000378182 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
TRIM13-202ENST00000378182 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.07
TRIM13-202ENST00000378182 ROMO1P60602 79 aa8.36□□□□□ -1.07
TRIM13-202ENST00000378182 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
TRIM13-202ENST00000378182 MAST4O15021 2626 aa8.34□□□□□ -1.07
TRIM13-202ENST00000378182 ATRQ13535 2644 aa8.34□□□□□ -1.07
TRIM13-202ENST00000378182 A0A0C4DFX4 3053 aa8.34□□□□□ -1.07
TRIM13-202ENST00000378182 LINC00472Q9H8W2 130 aa8.33□□□□□ -1.08
TRIM13-202ENST00000378182 LINC01558Q9Y6Z2 57 aa8.32□□□□□ -1.08
TRIM13-202ENST00000378182 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
TRIM13-202ENST00000378182 LAMA2P24043 3122 aaKnown RBP8.31□□□□□ -1.08
TRIM13-202ENST00000378182 PANO1I0J062 215 aa8.3□□□□□ -1.08
TRIM13-202ENST00000378182 A0A087X002 238 aa8.29□□□□□ -1.08
TRIM13-202ENST00000378182 Q6ZR54 194 aa8.29□□□□□ -1.08
TRIM13-202ENST00000378182 SPRR1AP35321 89 aa8.29□□□□□ -1.08
TRIM13-202ENST00000378182 TRIOO75962 3097 aa8.29□□□□□ -1.08
TRIM13-202ENST00000378182 HELZ2Q9BYK8 2649 aaKnown RBP8.29□□□□□ -1.08
TRIM13-202ENST00000378182 FP248Q71RG6 208 aaPredicted RBP8.29□□□□□ -1.08
TRIM13-202ENST00000378182 BRCA2P51587 3418 aa8.28□□□□□ -1.08
TRIM13-202ENST00000378182 AKAP13Q12802 2813 aa8.28□□□□□ -1.08
TRIM13-202ENST00000378182 DNAH14Q0VDD8 3507 aa8.27□□□□□ -1.09
TRIM13-202ENST00000378182 PRUNE2Q8WUY3 3088 aa8.25□□□□□ -1.09
TRIM13-202ENST00000378182 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
TRIM13-202ENST00000378182 LAMA3Q16787 3333 aa8.24□□□□□ -1.09
TRIM13-202ENST00000378182 CENPEQ02224 2701 aa8.22□□□□□ -1.09
TRIM13-202ENST00000378182 Q5VV11 94 aa8.22□□□□□ -1.09
TRIM13-202ENST00000378182 UNC80Q8N2C7 3258 aa8.22□□□□□ -1.09
TRIM13-202ENST00000378182 REV3LO60673 3130 aa8.21□□□□□ -1.1
TRIM13-202ENST00000378182 CHD7Q9P2D1 2997 aa8.2□□□□□ -1.1
TRIM13-202ENST00000378182 H3BS24 57 aa8.2□□□□□ -1.1
TRIM13-202ENST00000378182 TEX15Q9BXT5 2789 aa8.19□□□□□ -1.1
TRIM13-202ENST00000378182 A8MUU9 505 aa8.19□□□□□ -1.1
TRIM13-202ENST00000378182 FREM2Q5SZK8 3169 aa8.19□□□□□ -1.1
TRIM13-202ENST00000378182 CDH23Q9H251 3354 aa8.18□□□□□ -1.1
TRIM13-202ENST00000378182 SPRR1BP22528 89 aa8.17□□□□□ -1.1
TRIM13-202ENST00000378182 CYSTM1Q9H1C7 97 aa8.17□□□□□ -1.1
TRIM13-202ENST00000378182 MGAQ8IWI9 3026 aa8.14□□□□□ -1.11
TRIM13-202ENST00000378182 SZT2Q5T011 3432 aa8.13□□□□□ -1.11
TRIM13-202ENST00000378182 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
TRIM13-202ENST00000378182 RANBP2P49792 3224 aaKnown RBP8.13□□□□□ -1.11
TRIM13-202ENST00000378182 NOTCH2NLQ7Z3S9 236 aa8.1□□□□□ -1.11
TRIM13-202ENST00000378182 COL6A3P12111 3177 aa8.09□□□□□ -1.12
TRIM13-202ENST00000378182 A8MU10 97 aa8.07□□□□□ -1.12
TRIM13-202ENST00000378182 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
TRIM13-202ENST00000378182 Q5XG85 94 aa8.06□□□□□ -1.12
TRIM13-202ENST00000378182 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
TRIM13-202ENST00000378182 WDFY4Q6ZS81 3184 aa8.04□□□□□ -1.12
TRIM13-202ENST00000378182 STAB1Q9NY15 2570 aa8.04□□□□□ -1.12
TRIM13-202ENST00000378182 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
TRIM13-202ENST00000378182 CRYBG3Q68DQ2 2970 aa8.04□□□□□ -1.12
TRIM13-202ENST00000378182 VPS13AQ96RL7 3174 aa8.03□□□□□ -1.12
TRIM13-202ENST00000378182 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
TRIM13-202ENST00000378182 FRYQ5TBA9 3013 aa8□□□□□ -1.13
TRIM13-202ENST00000378182 TEP1Q99973 2627 aaKnown RBP7.97□□□□□ -1.13
TRIM13-202ENST00000378182 SPEGQ15772 3267 aa7.96□□□□□ -1.14
TRIM13-202ENST00000378182 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
TRIM13-202ENST00000378182 CFAP47Q6ZTR5 3102 aa7.92□□□□□ -1.14
TRIM13-202ENST00000378182 COL6A5A8TX70 2615 aa7.92□□□□□ -1.14
TRIM13-202ENST00000378182 KRTAP10-8P60410 259 aa7.91□□□□□ -1.14
TRIM13-202ENST00000378182 BAHCC1Q9P281 2608 aa7.91□□□□□ -1.14
TRIM13-202ENST00000378182 UNC79Q9P2D8 2635 aa7.91□□□□□ -1.14
TRIM13-202ENST00000378182 KRTAP4-16G5E9R7 235 aaPredicted RBP7.91□□□□□ -1.14
TRIM13-202ENST00000378182 NOTCH1P46531 2555 aa7.9□□□□□ -1.14
TRIM13-202ENST00000378182 TNP1P09430 55 aa7.9□□□□□ -1.14
TRIM13-202ENST00000378182 HTTP42858 3142 aa7.9□□□□□ -1.15
TRIM13-202ENST00000378182 KRTAP13-2Q52LG2 175 aa7.87□□□□□ -1.15
TRIM13-202ENST00000378182 MAP1AP78559 2803 aaPredicted RBP7.86□□□□□ -1.15
TRIM13-202ENST00000378182 VCANP13611 3396 aa7.85□□□□□ -1.15
TRIM13-202ENST00000378182 GCN1Q92616 2671 aaKnown RBP7.85□□□□□ -1.15
TRIM13-202ENST00000378182 Q6ZRN7 208 aaPredicted RBP7.84□□□□□ -1.15
TRIM13-202ENST00000378182 SETXQ7Z333 2677 aaKnown RBP7.84□□□□□ -1.15
TRIM13-202ENST00000378182 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
TRIM13-202ENST00000378182 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
TRIM13-202ENST00000378182 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
TRIM13-202ENST00000378182 CHD9Q3L8U1 2897 aa7.81□□□□□ -1.16
TRIM13-202ENST00000378182 USP34Q70CQ2 3546 aa7.81□□□□□ -1.16
TRIM13-202ENST00000378182 KRTAP16-1A8MUX0 517 aa7.79□□□□□ -1.16
TRIM13-202ENST00000378182 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
TRIM13-202ENST00000378182 TRANK1O15050 2925 aa7.77□□□□□ -1.17
TRIM13-202ENST00000378182 ZNF292O60281 2723 aa7.76□□□□□ -1.17
TRIM13-202ENST00000378182 NBEAL2Q6ZNJ1 2754 aa7.76□□□□□ -1.17
TRIM13-202ENST00000378182 KALRNO60229 2985 aa7.76□□□□□ -1.17
TRIM13-202ENST00000378182 LAMA1P25391 3075 aa7.75□□□□□ -1.17
TRIM13-202ENST00000378182 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
TRIM13-202ENST00000378182 KMT2BQ9UMN6 2715 aaPredicted RBP7.74□□□□□ -1.17
TRIM13-202ENST00000378182 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
TRIM13-202ENST00000378182 STAB2Q8WWQ8 2551 aa7.73□□□□□ -1.17
TRIM13-202ENST00000378182 SPTBN5Q9NRC6 3674 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms