RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 SNCGO76070 127 aa11.42□□□□□ -0.58
DDR1-228ENST00000376575 COX6CP09669 75 aa11.42□□□□□ -0.58
DDR1-228ENST00000376575 OCIAD2Q56VL3 154 aa11.42□□□□□ -0.58
DDR1-228ENST00000376575 CLEC2BQ92478 149 aa11.42□□□□□ -0.58
DDR1-228ENST00000376575 RPS29P62273 56 aaKnown RBP11.41□□□□□ -0.58
DDR1-228ENST00000376575 C4orf48Q5BLP8 95 aa11.41□□□□□ -0.58
DDR1-228ENST00000376575 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
DDR1-228ENST00000376575 LRP2P98164 4655 aa11.35□□□□□ -0.59
DDR1-228ENST00000376575 CD164Q04900 197 aa11.35□□□□□ -0.59
DDR1-228ENST00000376575 LPAP08519 4548 aa11.35□□□□□ -0.59
DDR1-228ENST00000376575 LST1O00453 97 aa11.33□□□□□ -0.6
DDR1-228ENST00000376575 TRACP01848 142 aa11.33□□□□□ -0.6
DDR1-228ENST00000376575 GHRHP01286 108 aa11.32□□□□□ -0.6
DDR1-228ENST00000376575 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
DDR1-228ENST00000376575 SNHG12Q9BXW3 62 aa11.32□□□□□ -0.6
DDR1-228ENST00000376575 F8WEM9 126 aa11.31□□□□□ -0.6
DDR1-228ENST00000376575 BATFQ16520 125 aa11.31□□□□□ -0.6
DDR1-228ENST00000376575 A0A0G2JQZ4 141 aa11.29□□□□□ -0.6
DDR1-228ENST00000376575 H3BQ85 93 aa11.29□□□□□ -0.6
DDR1-228ENST00000376575 DNAL4O96015 105 aa11.29□□□□□ -0.6
DDR1-228ENST00000376575 Q6JHZ5 121 aa11.29□□□□□ -0.6
DDR1-228ENST00000376575 RETNLBQ9BQ08 111 aa11.29□□□□□ -0.6
DDR1-228ENST00000376575 NAA38Q9BRA0 125 aaKnown RBP11.29□□□□□ -0.6
DDR1-228ENST00000376575 ORMDL1Q9P0S3 153 aa11.29□□□□□ -0.6
DDR1-228ENST00000376575 NDUFV3P56181 108 aaKnown RBP11.28□□□□□ -0.6
DDR1-228ENST00000376575 PRR4Q16378 134 aa11.27□□□□□ -0.61
DDR1-228ENST00000376575 Q5XG85 94 aa11.27□□□□□ -0.61
DDR1-228ENST00000376575 IGFL1Q6UW32 110 aa11.27□□□□□ -0.61
DDR1-228ENST00000376575 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
DDR1-228ENST00000376575 TCL1BO95988 128 aa11.25□□□□□ -0.61
DDR1-228ENST00000376575 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
DDR1-228ENST00000376575 C9orf118A6NHY6 69 aa11.24□□□□□ -0.61
DDR1-228ENST00000376575 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
DDR1-228ENST00000376575 FABP2P12104 132 aa11.24□□□□□ -0.61
DDR1-228ENST00000376575 FP248Q71RG6 208 aaPredicted RBP11.24□□□□□ -0.61
DDR1-228ENST00000376575 H3BUT2 72 aa11.23□□□□□ -0.61
DDR1-228ENST00000376575 LIMD2Q9BT23 127 aa11.22□□□□□ -0.61
DDR1-228ENST00000376575 UBE2V1Q13404 147 aa11.21□□□□□ -0.61
DDR1-228ENST00000376575 ATXN8Q156A1 80 aa11.21□□□□□ -0.61
DDR1-228ENST00000376575 H3BMG7 143 aa11.2□□□□□ -0.62
DDR1-228ENST00000376575 LYRM7Q5U5X0 104 aa11.2□□□□□ -0.62
DDR1-228ENST00000376575 IGLV7-46A0A075B6I9 117 aa11.18□□□□□ -0.62
DDR1-228ENST00000376575 TRBV20-1A0A075B6N2 111 aa11.18□□□□□ -0.62
DDR1-228ENST00000376575 Q6Q795 121 aa11.18□□□□□ -0.62
DDR1-228ENST00000376575 UBR4Q5T4S7 5183 aa11.18□□□□□ -0.62
DDR1-228ENST00000376575 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
DDR1-228ENST00000376575 A0A1W2PPM0 123 aa11.16□□□□□ -0.62
DDR1-228ENST00000376575 TPRXLQ17RH7 258 aa11.16□□□□□ -0.62
DDR1-228ENST00000376575 BAALC-AS2P0C853 105 aa11.15□□□□□ -0.62
DDR1-228ENST00000376575 ASB16-AS1Q495Z4 193 aa11.13□□□□□ -0.63
DDR1-228ENST00000376575 COL5A1-AS1Q5SY13 56 aa11.13□□□□□ -0.63
DDR1-228ENST00000376575 TEN1Q86WV5 123 aa11.12□□□□□ -0.63
DDR1-228ENST00000376575 C1orf195Q5TG92 126 aa11.11□□□□□ -0.63
DDR1-228ENST00000376575 ANKRD29Q8N6D5 301 aa11.11□□□□□ -0.63
DDR1-228ENST00000376575 PCP4L1A6NKN8 68 aa11.1□□□□□ -0.63
DDR1-228ENST00000376575 A0A1W2PNM2 257 aa11.09□□□□□ -0.63
DDR1-228ENST00000376575 KRTAP13-3Q3SY46 172 aa11.09□□□□□ -0.63
DDR1-228ENST00000376575 TRBV7-4A0A0J9YYF1 115 aa11.07□□□□□ -0.64
DDR1-228ENST00000376575 RBM3P98179 157 aaKnown RBP11.05□□□□□ -0.64
DDR1-228ENST00000376575 A0A1B0GV72 72 aa11.04□□□□□ -0.64
DDR1-228ENST00000376575 C9JAW5 83 aa11.04□□□□□ -0.64
DDR1-228ENST00000376575 MUC17Q685J3 4493 aa11.03□□□□□ -0.64
DDR1-228ENST00000376575 OBSCN-AS1Q96MR7 158 aa11.01□□□□□ -0.65
DDR1-228ENST00000376575 A0A087WSZ3 146 aa11□□□□□ -0.65
DDR1-228ENST00000376575 JMJD7-PLA2G4BH0Y9G9 81 aa11□□□□□ -0.65
DDR1-228ENST00000376575 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
DDR1-228ENST00000376575 SPCS1Q9Y6A9 102 aa11□□□□□ -0.65
DDR1-228ENST00000376575 H3BT86 120 aa10.99□□□□□ -0.65
DDR1-228ENST00000376575 CCKP06307 115 aa10.99□□□□□ -0.65
DDR1-228ENST00000376575 DSCR8Q96T75 97 aa10.99□□□□□ -0.65
DDR1-228ENST00000376575 CDIP1Q9H305 208 aa10.99□□□□□ -0.65
DDR1-228ENST00000376575 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
DDR1-228ENST00000376575 Q96NJ1 140 aa10.95□□□□□ -0.66
DDR1-228ENST00000376575 K7EP34 96 aa10.93□□□□□ -0.66
DDR1-228ENST00000376575 Q6ZQT0 140 aa10.93□□□□□ -0.66
DDR1-228ENST00000376575 MTURNQ8N3F0 131 aa10.93□□□□□ -0.66
DDR1-228ENST00000376575 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
DDR1-228ENST00000376575 PDE6GP18545 87 aa10.91□□□□□ -0.66
DDR1-228ENST00000376575 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
DDR1-228ENST00000376575 XP32Q5T750 250 aa10.9□□□□□ -0.66
DDR1-228ENST00000376575 PRO0461Q9UI25 63 aa10.9□□□□□ -0.66
DDR1-228ENST00000376575 A0A1B0GW54 56 aa10.88□□□□□ -0.67
DDR1-228ENST00000376575 C14orf132Q9NPU4 83 aa10.88□□□□□ -0.67
DDR1-228ENST00000376575 LINC00472Q9H8W2 130 aa10.87□□□□□ -0.67
DDR1-228ENST00000376575 VPS25Q9BRG1 176 aa10.86□□□□□ -0.67
DDR1-228ENST00000376575 C9orf92A6NGG3 77 aa10.85□□□□□ -0.67
DDR1-228ENST00000376575 C21orf62-AS1Q17RA5 79 aa10.85□□□□□ -0.67
DDR1-228ENST00000376575 GTF2H5Q6ZYL4 71 aa10.83□□□□□ -0.68
DDR1-228ENST00000376575 MUC2Q02817 5179 aa10.83□□□□□ -0.68
DDR1-228ENST00000376575 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
DDR1-228ENST00000376575 F8W1H4 67 aa10.75□□□□□ -0.69
DDR1-228ENST00000376575 SEC61BP60468 96 aaKnown RBP10.75□□□□□ -0.69
DDR1-228ENST00000376575 DEFB116Q30KQ4 102 aa10.74□□□□□ -0.69
DDR1-228ENST00000376575 SIGMAR1Q99720 223 aa10.72□□□□□ -0.69
DDR1-228ENST00000376575 RPL37P61927 97 aaKnown RBP10.7□□□□□ -0.7
DDR1-228ENST00000376575 J3KT08 172 aa10.69□□□□□ -0.7
DDR1-228ENST00000376575 Q75L30 129 aa10.66□□□□□ -0.7
DDR1-228ENST00000376575 KRTAP4-1Q9BYQ7 146 aa10.65□□□□□ -0.7
DDR1-228ENST00000376575 DSCR10P59022 87 aa10.64□□□□□ -0.71
DDR1-228ENST00000376575 NREPQ16612 68 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms