RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 NBEAQ8NFP9 2946 aa8.66□□□□□ -1.02
C9orf47-203ENST00000375851 COA5Q86WW8 74 aa8.64□□□□□ -1.03
C9orf47-203ENST00000375851 COL12A1Q99715 3063 aa8.63□□□□□ -1.03
C9orf47-203ENST00000375851 H7BZZ5 65 aa8.63□□□□□ -1.03
C9orf47-203ENST00000375851 TNP2Q05952 138 aa8.63□□□□□ -1.03
C9orf47-203ENST00000375851 KALRNO60229 2985 aa8.62□□□□□ -1.03
C9orf47-203ENST00000375851 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
C9orf47-203ENST00000375851 ADGRG4Q8IZF6 3080 aa8.61□□□□□ -1.03
C9orf47-203ENST00000375851 BOD1L1Q8NFC6 3051 aa8.6□□□□□ -1.03
C9orf47-203ENST00000375851 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
C9orf47-203ENST00000375851 A8MUN3 132 aa8.59□□□□□ -1.03
C9orf47-203ENST00000375851 Q8NDZ9 215 aa8.59□□□□□ -1.03
C9orf47-203ENST00000375851 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
C9orf47-203ENST00000375851 DMXL2Q8TDJ6 3036 aa8.58□□□□□ -1.04
C9orf47-203ENST00000375851 C9orf92A6NGG3 77 aa8.57□□□□□ -1.04
C9orf47-203ENST00000375851 ITPR2Q14571 2701 aa8.56□□□□□ -1.04
C9orf47-203ENST00000375851 STAB2Q8WWQ8 2551 aa8.55□□□□□ -1.04
C9orf47-203ENST00000375851 J3QL48 77 aa8.55□□□□□ -1.04
C9orf47-203ENST00000375851 DNAH14Q0VDD8 3507 aa8.53□□□□□ -1.04
C9orf47-203ENST00000375851 SPRR1AP35321 89 aa8.5□□□□□ -1.05
C9orf47-203ENST00000375851 COL6A3P12111 3177 aa8.5□□□□□ -1.05
C9orf47-203ENST00000375851 OCR1Q9BZK8 76 aa8.5□□□□□ -1.05
C9orf47-203ENST00000375851 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
C9orf47-203ENST00000375851 REV3LO60673 3130 aa8.49□□□□□ -1.05
C9orf47-203ENST00000375851 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
C9orf47-203ENST00000375851 UQCR11O14957 56 aa8.46□□□□□ -1.05
C9orf47-203ENST00000375851 ZZEF1O43149 2961 aa8.46□□□□□ -1.06
C9orf47-203ENST00000375851 KRTAP26-1Q6PEX3 210 aa8.46□□□□□ -1.06
C9orf47-203ENST00000375851 LRBAP50851 2863 aa8.45□□□□□ -1.06
C9orf47-203ENST00000375851 CD164Q04900 197 aa8.44□□□□□ -1.06
C9orf47-203ENST00000375851 SPANXA2-OT1Q8N9U9 137 aa8.44□□□□□ -1.06
C9orf47-203ENST00000375851 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
C9orf47-203ENST00000375851 UTP20O75691 2785 aaKnown RBP8.43□□□□□ -1.06
C9orf47-203ENST00000375851 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
C9orf47-203ENST00000375851 HIVEP1P15822 2718 aa8.4□□□□□ -1.06
C9orf47-203ENST00000375851 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.06
C9orf47-203ENST00000375851 COX6B2Q6YFQ2 88 aa8.38□□□□□ -1.07
C9orf47-203ENST00000375851 Q8N1X5 172 aa8.38□□□□□ -1.07
C9orf47-203ENST00000375851 FLG2Q5D862 2391 aaPredicted RBP8.37□□□□□ -1.07
C9orf47-203ENST00000375851 CFAP47Q6ZTR5 3102 aa8.37□□□□□ -1.07
C9orf47-203ENST00000375851 EYSQ5T1H1 3165 aa8.36□□□□□ -1.07
C9orf47-203ENST00000375851 SPRR1BP22528 89 aa8.36□□□□□ -1.07
C9orf47-203ENST00000375851 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
C9orf47-203ENST00000375851 MIR22HGQ0VDD5 57 aa8.36□□□□□ -1.07
C9orf47-203ENST00000375851 NIPBLQ6KC79 2804 aaeCLIP8.34□□□□□ -1.07
C9orf47-203ENST00000375851 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
C9orf47-203ENST00000375851 CELSR2Q9HCU4 2923 aa8.34□□□□□ -1.07
C9orf47-203ENST00000375851 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
C9orf47-203ENST00000375851 KMT2BQ9UMN6 2715 aaPredicted RBP8.32□□□□□ -1.08
C9orf47-203ENST00000375851 APCP25054 2843 aa8.32□□□□□ -1.08
C9orf47-203ENST00000375851 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
C9orf47-203ENST00000375851 SPEGQ15772 3267 aa8.29□□□□□ -1.08
C9orf47-203ENST00000375851 RBM12B-AS1Q9P1G2 102 aa8.28□□□□□ -1.08
C9orf47-203ENST00000375851 IGLV7-46A0A075B6I9 117 aa8.28□□□□□ -1.08
C9orf47-203ENST00000375851 TNRC18O15417 2968 aaPredicted RBP8.27□□□□□ -1.09
C9orf47-203ENST00000375851 TENM4Q6N022 2769 aa8.27□□□□□ -1.09
C9orf47-203ENST00000375851 HRES1P13985 223 aa8.26□□□□□ -1.09
C9orf47-203ENST00000375851 DMXL1Q9Y485 3027 aa8.26□□□□□ -1.09
C9orf47-203ENST00000375851 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
C9orf47-203ENST00000375851 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
C9orf47-203ENST00000375851 Q8N9P0 234 aaPredicted RBP8.23□□□□□ -1.09
C9orf47-203ENST00000375851 KRTAP4-16G5E9R7 235 aaPredicted RBP8.22□□□□□ -1.09
C9orf47-203ENST00000375851 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
C9orf47-203ENST00000375851 PANO1I0J062 215 aa8.22□□□□□ -1.09
C9orf47-203ENST00000375851 DCHS2Q6V1P9 2916 aa8.21□□□□□ -1.09
C9orf47-203ENST00000375851 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
C9orf47-203ENST00000375851 Q1T7F1 81 aa8.2□□□□□ -1.1
C9orf47-203ENST00000375851 Q6ZSA8 131 aa8.19□□□□□ -1.1
C9orf47-203ENST00000375851 ZCCHC13Q8WW36 166 aaKnown RBP8.18□□□□□ -1.1
C9orf47-203ENST00000375851 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
C9orf47-203ENST00000375851 CRYBG3Q68DQ2 2970 aa8.17□□□□□ -1.1
C9orf47-203ENST00000375851 A0A0D9SG42 100 aa8.16□□□□□ -1.1
C9orf47-203ENST00000375851 Q6ZR54 194 aa8.16□□□□□ -1.1
C9orf47-203ENST00000375851 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
C9orf47-203ENST00000375851 LOC400499M0QZD8 3231 aa8.15□□□□□ -1.1
C9orf47-203ENST00000375851 CRIPTQ9P021 101 aa8.15□□□□□ -1.11
C9orf47-203ENST00000375851 LCE6AA0A183 80 aa8.14□□□□□ -1.11
C9orf47-203ENST00000375851 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
C9orf47-203ENST00000375851 NF1P21359 2839 aa8.14□□□□□ -1.11
C9orf47-203ENST00000375851 Q5W150 140 aa8.14□□□□□ -1.11
C9orf47-203ENST00000375851 SPTBN5Q9NRC6 3674 aaKnown RBP8.14□□□□□ -1.11
C9orf47-203ENST00000375851 LINC00483Q53H64 154 aa8.12□□□□□ -1.11
C9orf47-203ENST00000375851 USP34Q70CQ2 3546 aa8.11□□□□□ -1.11
C9orf47-203ENST00000375851 KTN1-AS1Q86SY8 53 aa8.09□□□□□ -1.11
C9orf47-203ENST00000375851 HRNRQ86YZ3 2850 aaPredicted RBP8.08□□□□□ -1.12
C9orf47-203ENST00000375851 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
C9orf47-203ENST00000375851 FBN2P35556 2912 aa8.08□□□□□ -1.12
C9orf47-203ENST00000375851 A0A1B0GU33 70 aa8.07□□□□□ -1.12
C9orf47-203ENST00000375851 SPINK7P58062 85 aa8.07□□□□□ -1.12
C9orf47-203ENST00000375851 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
C9orf47-203ENST00000375851 Q75L30 129 aa8.05□□□□□ -1.12
C9orf47-203ENST00000375851 Q5XG85 94 aa8.05□□□□□ -1.12
C9orf47-203ENST00000375851 Q5VSD8 79 aa8.04□□□□□ -1.12
C9orf47-203ENST00000375851 Q6ZRN7 208 aaPredicted RBP8.04□□□□□ -1.12
C9orf47-203ENST00000375851 KRTAP11-1Q8IUC1 163 aa8.04□□□□□ -1.12
C9orf47-203ENST00000375851 A0A087X002 238 aa8.02□□□□□ -1.13
C9orf47-203ENST00000375851 KRTAP7-1Q8IUC3 87 aa8.02□□□□□ -1.13
C9orf47-203ENST00000375851 LCA10Q71F78 164 aa8.01□□□□□ -1.13
C9orf47-203ENST00000375851 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
C9orf47-203ENST00000375851 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms