RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 LTN1O94822 1766 aa-1.95□□□□□ -2.72
RNU4-1-201ENST00000363925 CEP290O15078 2479 aa-1.96□□□□□ -2.72
RNU4-1-201ENST00000363925 ATP6V1G2-DDX39BF2Z307 99 aa-1.96□□□□□ -2.72
RNU4-1-201ENST00000363925 ATP10BO94823 1461 aa-1.96□□□□□ -2.72
RNU4-1-201ENST00000363925 ACACBO00763 2458 aa-1.96□□□□□ -2.72
RNU4-1-201ENST00000363925 CMYA5Q8N3K9 4069 aa-1.96□□□□□ -2.72
RNU4-1-201ENST00000363925 PLXNC1O60486 1568 aa-1.97□□□□□ -2.72
RNU4-1-201ENST00000363925 CNTLNQ9NXG0 1405 aa-1.97□□□□□ -2.72
RNU4-1-201ENST00000363925 FANCAO15360 1455 aa-1.97□□□□□ -2.72
RNU4-1-201ENST00000363925 TEX15Q9BXT5 2789 aa-1.98□□□□□ -2.73
RNU4-1-201ENST00000363925 K7EP34 96 aa-1.98□□□□□ -2.73
RNU4-1-201ENST00000363925 POLR1AO95602 1720 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-1-201ENST00000363925 RIF1Q5UIP0 2472 aaKnown RBP-1.98□□□□□ -2.73
RNU4-1-201ENST00000363925 NESP48681 1621 aa-1.99□□□□□ -2.73
RNU4-1-201ENST00000363925 RBP2P50120 134 aa-1.99□□□□□ -2.73
RNU4-1-201ENST00000363925 NWD1Q149M9 1564 aa-2□□□□□ -2.73
RNU4-1-201ENST00000363925 NCMAPQ5T1S8 102 aa-2□□□□□ -2.73
RNU4-1-201ENST00000363925 ACBD7Q8N6N7 88 aa-2□□□□□ -2.73
RNU4-1-201ENST00000363925 TRIOO75962 3097 aa-2□□□□□ -2.73
RNU4-1-201ENST00000363925 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-1-201ENST00000363925 RYR2Q92736 4967 aa-2.02□□□□□ -2.73
RNU4-1-201ENST00000363925 RELNP78509 3460 aa-2.02□□□□□ -2.73
RNU4-1-201ENST00000363925 DNAH7Q8WXX0 4024 aa-2.02□□□□□ -2.73
RNU4-1-201ENST00000363925 RNF213Q63HN8 5207 aa-2.03□□□□□ -2.73
RNU4-1-201ENST00000363925 ACYP1P07311 99 aa-2.03□□□□□ -2.73
RNU4-1-201ENST00000363925 MT1HP80294 61 aa-2.03□□□□□ -2.73
RNU4-1-201ENST00000363925 PLIN4Q96Q06 1357 aa-2.03□□□□□ -2.73
RNU4-1-201ENST00000363925 LAMA3Q16787 3333 aa-2.04□□□□□ -2.74
RNU4-1-201ENST00000363925 GYPAP02724 150 aa-2.04□□□□□ -2.74
RNU4-1-201ENST00000363925 IFI6P09912 130 aa-2.04□□□□□ -2.74
RNU4-1-201ENST00000363925 NEXMIFQ5QGS0 1516 aa-2.04□□□□□ -2.74
RNU4-1-201ENST00000363925 DOT1LQ8TEK3 1739 aa-2.05□□□□□ -2.74
RNU4-1-201ENST00000363925 MYO3AQ8NEV4 1616 aa-2.05□□□□□ -2.74
RNU4-1-201ENST00000363925 NDUFB1O75438 58 aa-2.05□□□□□ -2.74
RNU4-1-201ENST00000363925 DEFB1P60022 68 aa-2.05□□□□□ -2.74
RNU4-1-201ENST00000363925 DEFB106AQ8N104 65 aa-2.05□□□□□ -2.74
RNU4-1-201ENST00000363925 UBR1Q8IWV7 1749 aa-2.05□□□□□ -2.74
RNU4-1-201ENST00000363925 MAGI3Q5TCQ9 1506 aa-2.06□□□□□ -2.74
RNU4-1-201ENST00000363925 MYMXA0A1B0GTQ4 84 aa-2.06□□□□□ -2.74
RNU4-1-201ENST00000363925 M0R143 59 aa-2.06□□□□□ -2.74
RNU4-1-201ENST00000363925 C20orf78Q9BR46 151 aa-2.06□□□□□ -2.74
RNU4-1-201ENST00000363925 DEPDC5O75140 1603 aa-2.06□□□□□ -2.74
RNU4-1-201ENST00000363925 H0YAA0 97 aa-2.07□□□□□ -2.74
RNU4-1-201ENST00000363925 WIZO95785 1651 aa-2.08□□□□□ -2.74
RNU4-1-201ENST00000363925 IAPPP10997 89 aa-2.08□□□□□ -2.74
RNU4-1-201ENST00000363925 DEFB130BP0DP73 79 aa-2.1□□□□□ -2.75
RNU4-1-201ENST00000363925 DEFB130AP0DP74 79 aa-2.1□□□□□ -2.75
RNU4-1-201ENST00000363925 DYNC1H1Q14204 4646 aaKnown RBP-2.11□□□□□ -2.75
RNU4-1-201ENST00000363925 CEBPZOSA8MTT3 80 aa-2.12□□□□□ -2.75
RNU4-1-201ENST00000363925 IFI27P40305 119 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-1-201ENST00000363925 ANKRD26Q9UPS8 1709 aa-2.12□□□□□ -2.75
RNU4-1-201ENST00000363925 RANBP2P49792 3224 aaKnown RBP-2.13□□□□□ -2.75
RNU4-1-201ENST00000363925 AKAP12Q02952 1782 aa-2.13□□□□□ -2.75
RNU4-1-201ENST00000363925 NCOA2Q15596 1464 aa-2.14□□□□□ -2.75
RNU4-1-201ENST00000363925 DDX60LQ5H9U9 1706 aaKnown RBP-2.14□□□□□ -2.75
RNU4-1-201ENST00000363925 LYNX1G3V0Z9 82 aa-2.14□□□□□ -2.75
RNU4-1-201ENST00000363925 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.15□□□□□ -2.75
RNU4-1-201ENST00000363925 ANKRD36CQ5JPF3 1778 aa-2.15□□□□□ -2.75
RNU4-1-201ENST00000363925 USP9XQ93008 2570 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-1-201ENST00000363925 TLN2Q9Y4G6 2542 aa-2.17□□□□□ -2.76
RNU4-1-201ENST00000363925 LCE6AA0A183 80 aa-2.17□□□□□ -2.76
RNU4-1-201ENST00000363925 UMAD1C9J7I0 102 aa-2.17□□□□□ -2.76
RNU4-1-201ENST00000363925 ABCC10Q5T3U5 1492 aa-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 CCNB3Q8WWL7 1395 aa-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 SNRPFP62306 86 aaKnown RBP-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 CEP162Q5TB80 1403 aa-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 FRYQ5TBA9 3013 aa-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 ARFGEF2Q9Y6D5 1785 aa-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 ZNF831Q5JPB2 1677 aa-2.18□□□□□ -2.76
RNU4-1-201ENST00000363925 LINC00643Q86TS7 51 aa-2.19□□□□□ -2.76
RNU4-1-201ENST00000363925 RABAC1Q9UI14 185 aa-2.19□□□□□ -2.76
RNU4-1-201ENST00000363925 URB2Q14146 1524 aaKnown RBP-2.19□□□□□ -2.76
RNU4-1-201ENST00000363925 KRTAP19-5Q3LI72 72 aa-2.2□□□□□ -2.76
RNU4-1-201ENST00000363925 SNHG12Q9BXW3 62 aa-2.2□□□□□ -2.76
RNU4-1-201ENST00000363925 TMEM131LA2VDJ0 1609 aa-2.2□□□□□ -2.76
RNU4-1-201ENST00000363925 NDUFA4O00483 81 aa-2.21□□□□□ -2.76
RNU4-1-201ENST00000363925 C5orf42Q9H799 3197 aa-2.22□□□□□ -2.76
RNU4-1-201ENST00000363925 SPENQ96T58 3664 aaKnown RBP-2.22□□□□□ -2.76
RNU4-1-201ENST00000363925 PKIAP61925 76 aa-2.23□□□□□ -2.77
RNU4-1-201ENST00000363925 S100A16Q96FQ6 103 aaKnown RBP-2.23□□□□□ -2.77
RNU4-1-201ENST00000363925 SPTBN5Q9NRC6 3674 aaKnown RBP-2.23□□□□□ -2.77
RNU4-1-201ENST00000363925 DIP2BQ9P265 1576 aa-2.23□□□□□ -2.77
RNU4-1-201ENST00000363925 PYY3Q5JQD4 70 aa-2.24□□□□□ -2.77
RNU4-1-201ENST00000363925 Q9H521 79 aa-2.24□□□□□ -2.77
RNU4-1-201ENST00000363925 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.24□□□□□ -2.77
RNU4-1-201ENST00000363925 PLCH1Q4KWH8 1693 aa-2.25□□□□□ -2.77
RNU4-1-201ENST00000363925 ITSN1Q15811 1721 aa-2.27□□□□□ -2.77
RNU4-1-201ENST00000363925 BPTFQ12830 3046 aa-2.27□□□□□ -2.77
RNU4-1-201ENST00000363925 S100A8P05109 93 aa-2.28□□□□□ -2.77
RNU4-1-201ENST00000363925 CLPSL2Q6UWE3 100 aa-2.28□□□□□ -2.77
RNU4-1-201ENST00000363925 PIK3C2BO00750 1634 aa-2.28□□□□□ -2.77
RNU4-1-201ENST00000363925 SRCAPQ6ZRS2 3230 aa-2.29□□□□□ -2.78
RNU4-1-201ENST00000363925 NREPQ16612 68 aa-2.29□□□□□ -2.78
RNU4-1-201ENST00000363925 PARP4Q9UKK3 1724 aaKnown RBP-2.3□□□□□ -2.78
RNU4-1-201ENST00000363925 CCDC88BA6NC98 1476 aa-2.31□□□□□ -2.78
RNU4-1-201ENST00000363925 MRPL33O75394 65 aaKnown RBP-2.31□□□□□ -2.78
RNU4-1-201ENST00000363925 VPS8Q8N3P4 1428 aa-2.32□□□□□ -2.78
RNU4-1-201ENST00000363925 PEG3Q9GZU2 1588 aa-2.32□□□□□ -2.78
RNU4-1-201ENST00000363925 COL12A1Q99715 3063 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms