RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 Q8NDZ9 215 aa12.38□□□□□ -0.43
CDC42BPB-201ENST00000361246 ZCCHC13Q8WW36 166 aaKnown RBP12.38□□□□□ -0.43
CDC42BPB-201ENST00000361246 KLKP1Q107X0 134 aa12.38□□□□□ -0.43
CDC42BPB-201ENST00000361246 MAST4O15021 2626 aa12.37□□□□□ -0.43
CDC42BPB-201ENST00000361246 Q8N9P0 234 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPB-201ENST00000361246 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
CDC42BPB-201ENST00000361246 CSAG1Q6PB30 78 aa12.33□□□□□ -0.44
CDC42BPB-201ENST00000361246 A0A1B0GU33 70 aa12.33□□□□□ -0.44
CDC42BPB-201ENST00000361246 FREM2Q5SZK8 3169 aa12.32□□□□□ -0.44
CDC42BPB-201ENST00000361246 SEC61BP60468 96 aaKnown RBP12.3□□□□□ -0.44
CDC42BPB-201ENST00000361246 COL6A3P12111 3177 aa12.29□□□□□ -0.44
CDC42BPB-201ENST00000361246 SPINK7P58062 85 aa12.28□□□□□ -0.44
CDC42BPB-201ENST00000361246 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
CDC42BPB-201ENST00000361246 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
CDC42BPB-201ENST00000361246 R4GN34 69 aa12.25□□□□□ -0.45
CDC42BPB-201ENST00000361246 WIPF1O43516 503 aa12.25□□□□□ -0.45
CDC42BPB-201ENST00000361246 TEX15Q9BXT5 2789 aa12.24□□□□□ -0.45
CDC42BPB-201ENST00000361246 LUZP6Q538Z0 58 aa12.24□□□□□ -0.45
CDC42BPB-201ENST00000361246 SPANXA2-OT1Q8N9U9 137 aa12.23□□□□□ -0.45
CDC42BPB-201ENST00000361246 VPS13AQ96RL7 3174 aa12.22□□□□□ -0.45
CDC42BPB-201ENST00000361246 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
CDC42BPB-201ENST00000361246 MMP24-AS1A0A0U1RRL7 71 aa12.2□□□□□ -0.46
CDC42BPB-201ENST00000361246 Q5W150 140 aa12.19□□□□□ -0.46
CDC42BPB-201ENST00000361246 OCR1Q9BZK8 76 aa12.19□□□□□ -0.46
CDC42BPB-201ENST00000361246 PANO1I0J062 215 aa12.19□□□□□ -0.46
CDC42BPB-201ENST00000361246 CENPEQ02224 2701 aa12.17□□□□□ -0.46
CDC42BPB-201ENST00000361246 TEP1Q99973 2627 aaKnown RBP12.16□□□□□ -0.46
CDC42BPB-201ENST00000361246 CHD6Q8TD26 2715 aa12.15□□□□□ -0.46
CDC42BPB-201ENST00000361246 Q1T7F1 81 aa12.15□□□□□ -0.46
CDC42BPB-201ENST00000361246 VCANP13611 3396 aa12.12□□□□□ -0.47
CDC42BPB-201ENST00000361246 KTN1-AS1Q86SY8 53 aa12.09□□□□□ -0.47
CDC42BPB-201ENST00000361246 M0QZ58 72 aa12.07□□□□□ -0.48
CDC42BPB-201ENST00000361246 LCA10Q71F78 164 aa12.06□□□□□ -0.48
CDC42BPB-201ENST00000361246 FRYQ5TBA9 3013 aa12.05□□□□□ -0.48
CDC42BPB-201ENST00000361246 SPRR1AP35321 89 aa12.03□□□□□ -0.48
CDC42BPB-201ENST00000361246 REV3LO60673 3130 aa12.02□□□□□ -0.49
CDC42BPB-201ENST00000361246 A0A087X002 238 aa12.02□□□□□ -0.49
CDC42BPB-201ENST00000361246 SPEGQ15772 3267 aa12.01□□□□□ -0.49
CDC42BPB-201ENST00000361246 ADM2Q7Z4H4 148 aa12□□□□□ -0.49
CDC42BPB-201ENST00000361246 DMAC1Q96GE9 116 aa12□□□□□ -0.49
CDC42BPB-201ENST00000361246 CFAP47Q6ZTR5 3102 aa12□□□□□ -0.49
CDC42BPB-201ENST00000361246 LAMA1P25391 3075 aa12□□□□□ -0.49
CDC42BPB-201ENST00000361246 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
CDC42BPB-201ENST00000361246 PLAC4Q8WY50 150 aa11.98□□□□□ -0.49
CDC42BPB-201ENST00000361246 LINC00472Q9H8W2 130 aa11.98□□□□□ -0.49
CDC42BPB-201ENST00000361246 TRANK1O15050 2925 aa11.97□□□□□ -0.49
CDC42BPB-201ENST00000361246 FLG2Q5D862 2391 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPB-201ENST00000361246 BAHCC1Q9P281 2608 aa11.97□□□□□ -0.49
CDC42BPB-201ENST00000361246 OXTP01178 125 aa11.96□□□□□ -0.49
CDC42BPB-201ENST00000361246 SPTBN5Q9NRC6 3674 aaKnown RBP11.95□□□□□ -0.5
CDC42BPB-201ENST00000361246 CRYBG3Q68DQ2 2970 aa11.95□□□□□ -0.5
CDC42BPB-201ENST00000361246 SETXQ7Z333 2677 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-201ENST00000361246 PRAC1Q96KF2 57 aa11.9□□□□□ -0.5
CDC42BPB-201ENST00000361246 DSPP15924 2871 aaKnown RBP11.9□□□□□ -0.51
CDC42BPB-201ENST00000361246 STAB1Q9NY15 2570 aa11.88□□□□□ -0.51
CDC42BPB-201ENST00000361246 SPATA8Q6RVD6 105 aa11.87□□□□□ -0.51
CDC42BPB-201ENST00000361246 Q6ZR54 194 aa11.84□□□□□ -0.51
CDC42BPB-201ENST00000361246 SPRR1BP22528 89 aa11.82□□□□□ -0.52
CDC42BPB-201ENST00000361246 NBEAL1Q6ZS30 2694 aa11.81□□□□□ -0.52
CDC42BPB-201ENST00000361246 CYSTM1Q9H1C7 97 aa11.81□□□□□ -0.52
CDC42BPB-201ENST00000361246 Q75L30 129 aa11.8□□□□□ -0.52
CDC42BPB-201ENST00000361246 KRTAP11-1Q8IUC1 163 aa11.79□□□□□ -0.52
CDC42BPB-201ENST00000361246 MAP1AP78559 2803 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPB-201ENST00000361246 EYSQ5T1H1 3165 aa11.77□□□□□ -0.52
CDC42BPB-201ENST00000361246 FP248Q71RG6 208 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPB-201ENST00000361246 USP34Q70CQ2 3546 aa11.76□□□□□ -0.53
CDC42BPB-201ENST00000361246 UNC79Q9P2D8 2635 aa11.76□□□□□ -0.53
CDC42BPB-201ENST00000361246 NOTCH2NLQ7Z3S9 236 aa11.75□□□□□ -0.53
CDC42BPB-201ENST00000361246 LINC01558Q9Y6Z2 57 aa11.73□□□□□ -0.53
CDC42BPB-201ENST00000361246 H1FX-AS1Q4G0G2 97 aa11.73□□□□□ -0.53
CDC42BPB-201ENST00000361246 KALRNO60229 2985 aa11.73□□□□□ -0.53
CDC42BPB-201ENST00000361246 BOD1L1Q8NFC6 3051 aa11.71□□□□□ -0.53
CDC42BPB-201ENST00000361246 COL6A5A8TX70 2615 aa11.7□□□□□ -0.54
CDC42BPB-201ENST00000361246 LRBAP50851 2863 aa11.7□□□□□ -0.54
CDC42BPB-201ENST00000361246 GCN1Q92616 2671 aaKnown RBP11.69□□□□□ -0.54
CDC42BPB-201ENST00000361246 NBEAL2Q6ZNJ1 2754 aa11.69□□□□□ -0.54
CDC42BPB-201ENST00000361246 RPL37P61927 97 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-201ENST00000361246 ITPR2Q14571 2701 aa11.65□□□□□ -0.54
CDC42BPB-201ENST00000361246 ZNF292O60281 2723 aa11.63□□□□□ -0.55
CDC42BPB-201ENST00000361246 Q5VV11 94 aa11.63□□□□□ -0.55
CDC42BPB-201ENST00000361246 MYO15AQ9UKN7 3530 aa11.62□□□□□ -0.55
CDC42BPB-201ENST00000361246 ROMO1P60602 79 aa11.61□□□□□ -0.55
CDC42BPB-201ENST00000361246 DMXL2Q8TDJ6 3036 aa11.6□□□□□ -0.55
CDC42BPB-201ENST00000361246 FRYLO94915 3013 aa11.59□□□□□ -0.55
CDC42BPB-201ENST00000361246 C20orf166-AS1Q96NR2 134 aa11.58□□□□□ -0.56
CDC42BPB-201ENST00000361246 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
CDC42BPB-201ENST00000361246 KRTAP4-16G5E9R7 235 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPB-201ENST00000361246 Q6ZRN7 208 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPB-201ENST00000361246 A8MUU9 505 aa11.53□□□□□ -0.56
CDC42BPB-201ENST00000361246 DMBT1Q9UGM3 2413 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPB-201ENST00000361246 NOTCH1P46531 2555 aa11.49□□□□□ -0.57
CDC42BPB-201ENST00000361246 TACC2O95359 2948 aa11.48□□□□□ -0.57
CDC42BPB-201ENST00000361246 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
CDC42BPB-201ENST00000361246 KRTAP13-2Q52LG2 175 aa11.47□□□□□ -0.57
CDC42BPB-201ENST00000361246 Q5XG85 94 aa11.47□□□□□ -0.57
CDC42BPB-201ENST00000361246 ATMQ13315 3056 aa11.47□□□□□ -0.57
CDC42BPB-201ENST00000361246 COL12A1Q99715 3063 aa11.46□□□□□ -0.58
CDC42BPB-201ENST00000361246 A8MU10 97 aa11.45□□□□□ -0.58
CDC42BPB-201ENST00000361246 ASPMQ8IZT6 3477 aa11.44□□□□□ -0.58
CDC42BPB-201ENST00000361246 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms