RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 LAMA1P25391 3075 aa3.05□□□□□ -1.92
SYNE2-203ENST00000357395 ZNF861PO60384 105 aa3.05□□□□□ -1.92
SYNE2-203ENST00000357395 SPATA8Q6RVD6 105 aa3.05□□□□□ -1.92
SYNE2-203ENST00000357395 C9orf129Q5T035 196 aaKnown RBP3.05□□□□□ -1.92
SYNE2-203ENST00000357395 NIPBLQ6KC79 2804 aaeCLIP3.05□□□□□ -1.92
SYNE2-203ENST00000357395 DMXL1Q9Y485 3027 aa3.05□□□□□ -1.92
SYNE2-203ENST00000357395 A6NN06 94 aa3.05□□□□□ -1.92
SYNE2-203ENST00000357395 PRR26Q8N8Z3 221 aa3.04□□□□□ -1.92
SYNE2-203ENST00000357395 ZNF575Q86XF7 245 aa3.04□□□□□ -1.92
SYNE2-203ENST00000357395 BOD1L1Q8NFC6 3051 aa3.04□□□□□ -1.92
SYNE2-203ENST00000357395 CHD9Q3L8U1 2897 aa3.04□□□□□ -1.92
SYNE2-203ENST00000357395 SPRR1AP35321 89 aa3.03□□□□□ -1.92
SYNE2-203ENST00000357395 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
SYNE2-203ENST00000357395 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
SYNE2-203ENST00000357395 CRYBG3Q68DQ2 2970 aa3.03□□□□□ -1.92
SYNE2-203ENST00000357395 NBEAL2Q6ZNJ1 2754 aa3.03□□□□□ -1.92
SYNE2-203ENST00000357395 KMT2BQ9UMN6 2715 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-203ENST00000357395 SPRR1BP22528 89 aa3.03□□□□□ -1.92
SYNE2-203ENST00000357395 APCP25054 2843 aa3.02□□□□□ -1.93
SYNE2-203ENST00000357395 ZCCHC13Q8WW36 166 aaKnown RBP3.02□□□□□ -1.93
SYNE2-203ENST00000357395 ITPR2Q14571 2701 aa3.02□□□□□ -1.93
SYNE2-203ENST00000357395 C19orf73Q9NVV2 129 aa3.01□□□□□ -1.93
SYNE2-203ENST00000357395 C9orf163Q8N9P6 203 aa3.01□□□□□ -1.93
SYNE2-203ENST00000357395 COL12A1Q99715 3063 aa3□□□□□ -1.93
SYNE2-203ENST00000357395 DSCR10P59022 87 aa3□□□□□ -1.93
SYNE2-203ENST00000357395 C10orf99Q6UWK7 81 aa3□□□□□ -1.93
SYNE2-203ENST00000357395 CSAG1Q6PB30 78 aa3□□□□□ -1.93
SYNE2-203ENST00000357395 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
SYNE2-203ENST00000357395 A0A1W2PNM2 257 aa2.99□□□□□ -1.93
SYNE2-203ENST00000357395 RPS29P62273 56 aaKnown RBP2.99□□□□□ -1.93
SYNE2-203ENST00000357395 LRBAP50851 2863 aa2.99□□□□□ -1.93
SYNE2-203ENST00000357395 TRANK1O15050 2925 aa2.99□□□□□ -1.93
SYNE2-203ENST00000357395 CHD7Q9P2D1 2997 aa2.99□□□□□ -1.93
SYNE2-203ENST00000357395 APLNQ9ULZ1 77 aa2.99□□□□□ -1.93
SYNE2-203ENST00000357395 C18orf65Q6ZTR6 163 aa2.98□□□□□ -1.93
SYNE2-203ENST00000357395 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
SYNE2-203ENST00000357395 COL6A3P12111 3177 aa2.98□□□□□ -1.93
SYNE2-203ENST00000357395 CELSR2Q9HCU4 2923 aa2.98□□□□□ -1.93
SYNE2-203ENST00000357395 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
SYNE2-203ENST00000357395 SPINK7P58062 85 aa2.97□□□□□ -1.93
SYNE2-203ENST00000357395 LINC00472Q9H8W2 130 aa2.97□□□□□ -1.93
SYNE2-203ENST00000357395 TACC2O95359 2948 aa2.97□□□□□ -1.93
SYNE2-203ENST00000357395 Q96NJ1 140 aa2.97□□□□□ -1.93
SYNE2-203ENST00000357395 CFAP47Q6ZTR5 3102 aa2.97□□□□□ -1.93
SYNE2-203ENST00000357395 LINC00304Q8N9R0 145 aa2.96□□□□□ -1.93
SYNE2-203ENST00000357395 M0QZ58 72 aa2.96□□□□□ -1.94
SYNE2-203ENST00000357395 OXTP01178 125 aa2.96□□□□□ -1.94
SYNE2-203ENST00000357395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.96□□□□□ -1.94
SYNE2-203ENST00000357395 NBDYA0A0U1RRE5 68 aa2.96□□□□□ -1.94
SYNE2-203ENST00000357395 DCHS2Q6V1P9 2916 aa2.95□□□□□ -1.94
SYNE2-203ENST00000357395 A0A096LNT2 108 aa2.94□□□□□ -1.94
SYNE2-203ENST00000357395 MMP24-AS1A0A0U1RRL7 71 aa2.94□□□□□ -1.94
SYNE2-203ENST00000357395 UNC80Q8N2C7 3258 aa2.94□□□□□ -1.94
SYNE2-203ENST00000357395 PSORS1C2Q9UIG4 136 aa2.93□□□□□ -1.94
SYNE2-203ENST00000357395 ZZEF1O43149 2961 aa2.93□□□□□ -1.94
SYNE2-203ENST00000357395 A0A1W2PPR1 153 aa2.93□□□□□ -1.94
SYNE2-203ENST00000357395 NF1P21359 2839 aa2.92□□□□□ -1.94
SYNE2-203ENST00000357395 H1FX-AS1Q4G0G2 97 aa2.92□□□□□ -1.94
SYNE2-203ENST00000357395 KRTAP29-1A8MX34 341 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-203ENST00000357395 RTL8CO15255 209 aa2.92□□□□□ -1.94
SYNE2-203ENST00000357395 SPACA4Q8TDM5 124 aa2.92□□□□□ -1.94
SYNE2-203ENST00000357395 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
SYNE2-203ENST00000357395 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
SYNE2-203ENST00000357395 PDZD2O15018 2839 aa2.91□□□□□ -1.94
SYNE2-203ENST00000357395 HIVEP1P15822 2718 aa2.9□□□□□ -1.94
SYNE2-203ENST00000357395 WDFY4Q6ZS81 3184 aa2.9□□□□□ -1.94
SYNE2-203ENST00000357395 TENM3Q9P273 2699 aa2.9□□□□□ -1.95
SYNE2-203ENST00000357395 ATMQ13315 3056 aa2.9□□□□□ -1.95
SYNE2-203ENST00000357395 Q5W150 140 aa2.89□□□□□ -1.95
SYNE2-203ENST00000357395 CASC10Q5T4H9 136 aa2.88□□□□□ -1.95
SYNE2-203ENST00000357395 S4R3F8 94 aa2.88□□□□□ -1.95
SYNE2-203ENST00000357395 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
SYNE2-203ENST00000357395 GIG44P09565 113 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-203ENST00000357395 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
SYNE2-203ENST00000357395 PANO1I0J062 215 aa2.87□□□□□ -1.95
SYNE2-203ENST00000357395 HTTP42858 3142 aa2.87□□□□□ -1.95
SYNE2-203ENST00000357395 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
SYNE2-203ENST00000357395 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
SYNE2-203ENST00000357395 RANBP2P49792 3224 aaKnown RBP2.86□□□□□ -1.95
SYNE2-203ENST00000357395 CELSR1Q9NYQ6 3014 aa2.86□□□□□ -1.95
SYNE2-203ENST00000357395 A0A1W2PNN7 141 aa2.85□□□□□ -1.95
SYNE2-203ENST00000357395 FLNCQ14315 2725 aa2.85□□□□□ -1.95
SYNE2-203ENST00000357395 A8MUU9 505 aa2.85□□□□□ -1.95
SYNE2-203ENST00000357395 MKI67P46013 3256 aaKnown RBP2.84□□□□□ -1.95
SYNE2-203ENST00000357395 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.96
SYNE2-203ENST00000357395 UTRNP46939 3433 aa2.83□□□□□ -1.96
SYNE2-203ENST00000357395 PLAC8Q9NZF1 115 aa2.82□□□□□ -1.96
SYNE2-203ENST00000357395 R4GN34 69 aa2.81□□□□□ -1.96
SYNE2-203ENST00000357395 A0A087WTM6 91 aa2.8□□□□□ -1.96
SYNE2-203ENST00000357395 XIRP2A4UGR9 3374 aa2.8□□□□□ -1.96
SYNE2-203ENST00000357395 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
SYNE2-203ENST00000357395 A0A0D9SG42 100 aa2.8□□□□□ -1.96
SYNE2-203ENST00000357395 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
SYNE2-203ENST00000357395 Q6ZSA8 131 aa2.79□□□□□ -1.96
SYNE2-203ENST00000357395 TENM1Q9UKZ4 2725 aa2.79□□□□□ -1.96
SYNE2-203ENST00000357395 SRRM2Q9UQ35 2752 aaKnown RBP2.77□□□□□ -1.97
SYNE2-203ENST00000357395 KRTAP26-1Q6PEX3 210 aa2.77□□□□□ -1.97
SYNE2-203ENST00000357395 C9orf92A6NGG3 77 aa2.77□□□□□ -1.97
SYNE2-203ENST00000357395 Q8N1X5 172 aa2.77□□□□□ -1.97
SYNE2-203ENST00000357395 TGP01266 2768 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms