RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 PRR15LQ9BU68 103 aa12.26□□□□□ -0.45
RNF38-202ENST00000350199 SPRR4Q96PI1 79 aa12.26□□□□□ -0.45
RNF38-202ENST00000350199 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
RNF38-202ENST00000350199 TNP2Q05952 138 aa12.26□□□□□ -0.45
RNF38-202ENST00000350199 KRTAP1-5Q9BYS1 174 aa12.26□□□□□ -0.45
RNF38-202ENST00000350199 LINC00313P59037 77 aa12.25□□□□□ -0.45
RNF38-202ENST00000350199 DCHS2Q6V1P9 2916 aa12.25□□□□□ -0.45
RNF38-202ENST00000350199 IGKV2D-30A0A075B6S6 120 aa12.25□□□□□ -0.45
RNF38-202ENST00000350199 IGKV2-30P06310 120 aa12.25□□□□□ -0.45
RNF38-202ENST00000350199 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.24□□□□□ -0.45
RNF38-202ENST00000350199 DCHS1Q96JQ0 3298 aa12.23□□□□□ -0.45
RNF38-202ENST00000350199 SSBP3-AS1Q7Z2R9 100 aa12.22□□□□□ -0.45
RNF38-202ENST00000350199 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
RNF38-202ENST00000350199 A6NED7 52 aa12.22□□□□□ -0.45
RNF38-202ENST00000350199 H3BPC8 53 aa12.22□□□□□ -0.45
RNF38-202ENST00000350199 NBEAL1Q6ZS30 2694 aa12.21□□□□□ -0.45
RNF38-202ENST00000350199 ZFHX4Q86UP3 3567 aa12.19□□□□□ -0.46
RNF38-202ENST00000350199 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
RNF38-202ENST00000350199 NF1P21359 2839 aa12.17□□□□□ -0.46
RNF38-202ENST00000350199 MRPL34Q9BQ48 92 aaKnown RBP12.16□□□□□ -0.46
RNF38-202ENST00000350199 SMR3BP02814 79 aaPredicted RBP12.16□□□□□ -0.46
RNF38-202ENST00000350199 SPRR1AP35321 89 aa12.16□□□□□ -0.46
RNF38-202ENST00000350199 A0A0U1RQV1 116 aa12.15□□□□□ -0.46
RNF38-202ENST00000350199 NIPBLQ6KC79 2804 aaeCLIP12.15□□□□□ -0.46
RNF38-202ENST00000350199 LINC00336Q6ZUF6 198 aa12.14□□□□□ -0.47
RNF38-202ENST00000350199 C8orf87E5RJ46 101 aa12.14□□□□□ -0.47
RNF38-202ENST00000350199 C8orf17Q9NRJ1 99 aa12.14□□□□□ -0.47
RNF38-202ENST00000350199 PSPHP1O15172 72 aa12.14□□□□□ -0.47
RNF38-202ENST00000350199 FBN2P35556 2912 aa12.13□□□□□ -0.47
RNF38-202ENST00000350199 SPINK1P00995 79 aa12.12□□□□□ -0.47
RNF38-202ENST00000350199 RPS28P62857 69 aaKnown RBP12.12□□□□□ -0.47
RNF38-202ENST00000350199 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
RNF38-202ENST00000350199 KMT2BQ9UMN6 2715 aaPredicted RBP12.1□□□□□ -0.47
RNF38-202ENST00000350199 Q96NJ1 140 aa12.1□□□□□ -0.47
RNF38-202ENST00000350199 KLKP1Q107X0 134 aa12.09□□□□□ -0.47
RNF38-202ENST00000350199 DSCR10P59022 87 aa12.07□□□□□ -0.48
RNF38-202ENST00000350199 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
RNF38-202ENST00000350199 C7orf65Q6ZTY9 151 aa12.04□□□□□ -0.48
RNF38-202ENST00000350199 MXRA5Q9NR99 2828 aa12.04□□□□□ -0.48
RNF38-202ENST00000350199 LOC101927531A0A1B0GV80 90 aa12.04□□□□□ -0.48
RNF38-202ENST00000350199 PLAC8Q9NZF1 115 aa12.03□□□□□ -0.48
RNF38-202ENST00000350199 ACYP2P14621 99 aa12.01□□□□□ -0.49
RNF38-202ENST00000350199 SPAG11AQ6PDA7 123 aa12□□□□□ -0.49
RNF38-202ENST00000350199 H7BZZ5 65 aa11.98□□□□□ -0.49
RNF38-202ENST00000350199 K7ERS5 55 aa11.97□□□□□ -0.49
RNF38-202ENST00000350199 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
RNF38-202ENST00000350199 SPRR1BP22528 89 aa11.9□□□□□ -0.5
RNF38-202ENST00000350199 OCR1Q9BZK8 76 aa11.9□□□□□ -0.5
RNF38-202ENST00000350199 SVIPQ8NHG7 77 aa11.9□□□□□ -0.5
RNF38-202ENST00000350199 CD164Q04900 197 aa11.87□□□□□ -0.51
RNF38-202ENST00000350199 KRTAP4-16G5E9R7 235 aaPredicted RBP11.87□□□□□ -0.51
RNF38-202ENST00000350199 IGLV8-61A0A075B6I0 122 aa11.86□□□□□ -0.51
RNF38-202ENST00000350199 C9orf92A6NGG3 77 aa11.86□□□□□ -0.51
RNF38-202ENST00000350199 SMG1Q96Q15 3661 aaKnown RBP11.85□□□□□ -0.51
RNF38-202ENST00000350199 PANO1I0J062 215 aa11.85□□□□□ -0.51
RNF38-202ENST00000350199 ATP11AUNQ6ZP68 121 aa11.85□□□□□ -0.51
RNF38-202ENST00000350199 TENM4Q6N022 2769 aa11.84□□□□□ -0.51
RNF38-202ENST00000350199 COA5Q86WW8 74 aa11.83□□□□□ -0.51
RNF38-202ENST00000350199 STAB2Q8WWQ8 2551 aa11.83□□□□□ -0.52
RNF38-202ENST00000350199 A0A1B0GU69 56 aa11.83□□□□□ -0.52
RNF38-202ENST00000350199 Q6ZR54 194 aa11.83□□□□□ -0.52
RNF38-202ENST00000350199 KRTAP10-2P60368 255 aa11.81□□□□□ -0.52
RNF38-202ENST00000350199 PMAIP1Q13794 54 aa11.8□□□□□ -0.52
RNF38-202ENST00000350199 FAM229BQ4G0N7 80 aa11.79□□□□□ -0.52
RNF38-202ENST00000350199 C1orf195Q5TG92 126 aa11.79□□□□□ -0.52
RNF38-202ENST00000350199 PRR26Q8N8Z3 221 aa11.78□□□□□ -0.52
RNF38-202ENST00000350199 KRTAP10-1P60331 282 aa11.75□□□□□ -0.53
RNF38-202ENST00000350199 LINC00472Q9H8W2 130 aa11.74□□□□□ -0.53
RNF38-202ENST00000350199 Q6ZRN7 208 aaPredicted RBP11.73□□□□□ -0.53
RNF38-202ENST00000350199 PDZD2O15018 2839 aa11.72□□□□□ -0.53
RNF38-202ENST00000350199 MMP24-AS1A0A0U1RRL7 71 aa11.71□□□□□ -0.53
RNF38-202ENST00000350199 J3QL48 77 aa11.71□□□□□ -0.53
RNF38-202ENST00000350199 PRO0628Q9UI54 55 aa11.7□□□□□ -0.54
RNF38-202ENST00000350199 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
RNF38-202ENST00000350199 SPANXA2-OT1Q8N9U9 137 aa11.69□□□□□ -0.54
RNF38-202ENST00000350199 LCE6AA0A183 80 aa11.68□□□□□ -0.54
RNF38-202ENST00000350199 A8MUN3 132 aa11.68□□□□□ -0.54
RNF38-202ENST00000350199 KRTAP11-1Q8IUC1 163 aa11.65□□□□□ -0.54
RNF38-202ENST00000350199 LINC00483Q53H64 154 aa11.64□□□□□ -0.55
RNF38-202ENST00000350199 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
RNF38-202ENST00000350199 CYSTM1Q9H1C7 97 aa11.63□□□□□ -0.55
RNF38-202ENST00000350199 CELSR1Q9NYQ6 3014 aa11.61□□□□□ -0.55
RNF38-202ENST00000350199 SPENQ96T58 3664 aaKnown RBP11.57□□□□□ -0.56
RNF38-202ENST00000350199 CYP4F30PQ9H0H9 118 aa11.53□□□□□ -0.56
RNF38-202ENST00000350199 BSNQ9UPA5 3926 aa11.53□□□□□ -0.56
RNF38-202ENST00000350199 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.56
RNF38-202ENST00000350199 SVEP1Q4LDE5 3571 aa11.52□□□□□ -0.57
RNF38-202ENST00000350199 TENM1Q9UKZ4 2725 aa11.52□□□□□ -0.57
RNF38-202ENST00000350199 Q8N1X5 172 aa11.52□□□□□ -0.57
RNF38-202ENST00000350199 IGLV7-46A0A075B6I9 117 aa11.49□□□□□ -0.57
RNF38-202ENST00000350199 OTOGQ6ZRI0 2925 aa11.49□□□□□ -0.57
RNF38-202ENST00000350199 TENM3Q9P273 2699 aa11.46□□□□□ -0.58
RNF38-202ENST00000350199 KRTAP21-3Q3LHN1 58 aa11.45□□□□□ -0.58
RNF38-202ENST00000350199 HRES1P13985 223 aa11.45□□□□□ -0.58
RNF38-202ENST00000350199 A0A087X002 238 aa11.44□□□□□ -0.58
RNF38-202ENST00000350199 Q8N9P0 234 aaPredicted RBP11.43□□□□□ -0.58
RNF38-202ENST00000350199 UQCR11O14957 56 aa11.42□□□□□ -0.58
RNF38-202ENST00000350199 KRTAP13-1Q8IUC0 172 aa11.4□□□□□ -0.58
RNF38-202ENST00000350199 Q5VSD8 79 aa11.39□□□□□ -0.59
RNF38-202ENST00000350199 ZCCHC13Q8WW36 166 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms