RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 MUC2Q02817 5179 aa11.01□□□□□ -0.65
CDHR4-201ENST00000343366 KRTAP13-2Q52LG2 175 aa11.01□□□□□ -0.65
CDHR4-201ENST00000343366 LINC01547P58512 204 aaPredicted RBP11□□□□□ -0.65
CDHR4-201ENST00000343366 FAM218AQ96MZ4 157 aa10.99□□□□□ -0.65
CDHR4-201ENST00000343366 Q8N377 158 aa10.98□□□□□ -0.65
CDHR4-201ENST00000343366 IGLV9-49A0A0B4J1Y8 123 aa10.97□□□□□ -0.65
CDHR4-201ENST00000343366 TRACP01848 142 aa10.97□□□□□ -0.65
CDHR4-201ENST00000343366 SPAG11AQ6PDA7 123 aa10.97□□□□□ -0.65
CDHR4-201ENST00000343366 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
CDHR4-201ENST00000343366 Q8NBF4 154 aa10.97□□□□□ -0.65
CDHR4-201ENST00000343366 CLEC2BQ92478 149 aa10.97□□□□□ -0.65
CDHR4-201ENST00000343366 F8WEM9 126 aa10.96□□□□□ -0.65
CDHR4-201ENST00000343366 COL5A1-AS1Q5SY13 56 aa10.96□□□□□ -0.65
CDHR4-201ENST00000343366 C9orf153Q5TBE3 101 aa10.96□□□□□ -0.65
CDHR4-201ENST00000343366 SNHG12Q9BXW3 62 aa10.96□□□□□ -0.65
CDHR4-201ENST00000343366 KRTAP9-2Q9BYQ4 174 aa10.96□□□□□ -0.65
CDHR4-201ENST00000343366 C9orf118A6NHY6 69 aa10.95□□□□□ -0.66
CDHR4-201ENST00000343366 LST1O00453 97 aa10.95□□□□□ -0.66
CDHR4-201ENST00000343366 TRBV20-1A0A075B6N2 111 aa10.94□□□□□ -0.66
CDHR4-201ENST00000343366 PCP4L1A6NKN8 68 aa10.94□□□□□ -0.66
CDHR4-201ENST00000343366 MOBPQ13875 183 aa10.94□□□□□ -0.66
CDHR4-201ENST00000343366 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
CDHR4-201ENST00000343366 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
CDHR4-201ENST00000343366 ORMDL1Q9P0S3 153 aa10.94□□□□□ -0.66
CDHR4-201ENST00000343366 ATXN8Q156A1 80 aa10.93□□□□□ -0.66
CDHR4-201ENST00000343366 SMIM29Q86T20 159 aa10.93□□□□□ -0.66
CDHR4-201ENST00000343366 H3BUT2 72 aa10.92□□□□□ -0.66
CDHR4-201ENST00000343366 TMEM256-PLSCR3K7ERE1 68 aa10.92□□□□□ -0.66
CDHR4-201ENST00000343366 TAX1BP3O14907 124 aa10.92□□□□□ -0.66
CDHR4-201ENST00000343366 SPINK1P00995 79 aa10.88□□□□□ -0.67
CDHR4-201ENST00000343366 FABP2P12104 132 aa10.88□□□□□ -0.67
CDHR4-201ENST00000343366 Q6JHZ5 121 aa10.88□□□□□ -0.67
CDHR4-201ENST00000343366 NAA38Q9BRA0 125 aaKnown RBP10.88□□□□□ -0.67
CDHR4-201ENST00000343366 IGLV8-61A0A075B6I0 122 aa10.87□□□□□ -0.67
CDHR4-201ENST00000343366 A0A1W2PPM0 123 aa10.87□□□□□ -0.67
CDHR4-201ENST00000343366 RPS29P62273 56 aaKnown RBP10.87□□□□□ -0.67
CDHR4-201ENST00000343366 FAT4Q6V0I7 4981 aa10.87□□□□□ -0.67
CDHR4-201ENST00000343366 TCL1BO95988 128 aa10.86□□□□□ -0.67
CDHR4-201ENST00000343366 NDUFV3P56181 108 aaKnown RBP10.85□□□□□ -0.67
CDHR4-201ENST00000343366 CD164Q04900 197 aa10.85□□□□□ -0.67
CDHR4-201ENST00000343366 UBE2V1Q13404 147 aa10.84□□□□□ -0.67
CDHR4-201ENST00000343366 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
CDHR4-201ENST00000343366 H3BMG7 143 aa10.78□□□□□ -0.68
CDHR4-201ENST00000343366 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
CDHR4-201ENST00000343366 KRTAP9-6A0A140TA67 174 aa10.77□□□□□ -0.69
CDHR4-201ENST00000343366 SPCS1Q9Y6A9 102 aa10.75□□□□□ -0.69
CDHR4-201ENST00000343366 LCE2AQ5TA79 106 aaPredicted RBP10.74□□□□□ -0.69
CDHR4-201ENST00000343366 IGFL1Q6UW32 110 aa10.74□□□□□ -0.69
CDHR4-201ENST00000343366 ANKRD29Q8N6D5 301 aa10.74□□□□□ -0.69
CDHR4-201ENST00000343366 C9JAW5 83 aa10.73□□□□□ -0.69
CDHR4-201ENST00000343366 JMJD7-PLA2G4BH0Y9G9 81 aa10.72□□□□□ -0.69
CDHR4-201ENST00000343366 H3BT86 120 aa10.72□□□□□ -0.69
CDHR4-201ENST00000343366 Q5XG85 94 aa10.72□□□□□ -0.69
CDHR4-201ENST00000343366 RBM3P98179 157 aaKnown RBP10.71□□□□□ -0.69
CDHR4-201ENST00000343366 Q6Q795 121 aa10.71□□□□□ -0.69
CDHR4-201ENST00000343366 GTF2H5Q6ZYL4 71 aa10.7□□□□□ -0.7
CDHR4-201ENST00000343366 TEN1Q86WV5 123 aa10.7□□□□□ -0.7
CDHR4-201ENST00000343366 C21orf62-AS1Q17RA5 79 aa10.69□□□□□ -0.7
CDHR4-201ENST00000343366 HRCT1Q6UXD1 115 aa10.69□□□□□ -0.7
CDHR4-201ENST00000343366 DSCR8Q96T75 97 aa10.68□□□□□ -0.7
CDHR4-201ENST00000343366 K7EP34 96 aa10.67□□□□□ -0.7
CDHR4-201ENST00000343366 TRBV7-7A0A0K0K1E9 115 aa10.66□□□□□ -0.7
CDHR4-201ENST00000343366 FP248Q71RG6 208 aaPredicted RBP10.66□□□□□ -0.7
CDHR4-201ENST00000343366 PDE6GP18545 87 aa10.65□□□□□ -0.7
CDHR4-201ENST00000343366 TRBV7-4A0A0J9YYF1 115 aa10.64□□□□□ -0.71
CDHR4-201ENST00000343366 SS18L2Q9UHA2 77 aa10.64□□□□□ -0.71
CDHR4-201ENST00000343366 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
CDHR4-201ENST00000343366 PRR4Q16378 134 aa10.62□□□□□ -0.71
CDHR4-201ENST00000343366 ASB16-AS1Q495Z4 193 aa10.62□□□□□ -0.71
CDHR4-201ENST00000343366 A0A0U1RQV1 116 aa10.59□□□□□ -0.71
CDHR4-201ENST00000343366 A0A1B0GV72 72 aa10.59□□□□□ -0.71
CDHR4-201ENST00000343366 A0A1B0GW54 56 aa10.59□□□□□ -0.71
CDHR4-201ENST00000343366 CCKP06307 115 aa10.59□□□□□ -0.71
CDHR4-201ENST00000343366 OBSCN-AS1Q96MR7 158 aa10.59□□□□□ -0.71
CDHR4-201ENST00000343366 LOC110117498A0A087WWA1 95 aa10.58□□□□□ -0.72
CDHR4-201ENST00000343366 RETNLBQ9BQ08 111 aa10.57□□□□□ -0.72
CDHR4-201ENST00000343366 A0A1W2PNM2 257 aa10.56□□□□□ -0.72
CDHR4-201ENST00000343366 F8W1H4 67 aa10.56□□□□□ -0.72
CDHR4-201ENST00000343366 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
CDHR4-201ENST00000343366 MTURNQ8N3F0 131 aa10.54□□□□□ -0.72
CDHR4-201ENST00000343366 A0A087WSZ3 146 aa10.53□□□□□ -0.72
CDHR4-201ENST00000343366 Q6ZQT0 140 aa10.53□□□□□ -0.72
CDHR4-201ENST00000343366 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
CDHR4-201ENST00000343366 VPS25Q9BRG1 176 aa10.52□□□□□ -0.73
CDHR4-201ENST00000343366 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
CDHR4-201ENST00000343366 C1orf195Q5TG92 126 aa10.51□□□□□ -0.73
CDHR4-201ENST00000343366 C14orf132Q9NPU4 83 aa10.51□□□□□ -0.73
CDHR4-201ENST00000343366 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
CDHR4-201ENST00000343366 MUC17Q685J3 4493 aa10.48□□□□□ -0.73
CDHR4-201ENST00000343366 KRTAP13-3Q3SY46 172 aa10.39□□□□□ -0.75
CDHR4-201ENST00000343366 CDIP1Q9H305 208 aa10.39□□□□□ -0.75
CDHR4-201ENST00000343366 A0A1B0GV90 55 aa10.37□□□□□ -0.75
CDHR4-201ENST00000343366 Q96NJ1 140 aa10.37□□□□□ -0.75
CDHR4-201ENST00000343366 J3KT08 172 aa10.36□□□□□ -0.75
CDHR4-201ENST00000343366 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
CDHR4-201ENST00000343366 LINC00472Q9H8W2 130 aa10.36□□□□□ -0.75
CDHR4-201ENST00000343366 IGKV4-1P06312 121 aa10.33□□□□□ -0.76
CDHR4-201ENST00000343366 NREPQ16612 68 aa10.33□□□□□ -0.76
CDHR4-201ENST00000343366 FSIP2Q5CZC0 6907 aa10.32□□□□□ -0.76
CDHR4-201ENST00000343366 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms