RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 NOTCH1P46531 2555 aa4.74□□□□□ -1.65
EPHA3-201ENST00000336596 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
EPHA3-201ENST00000336596 ZZEF1O43149 2961 aa4.74□□□□□ -1.65
EPHA3-201ENST00000336596 DSCR10P59022 87 aa4.74□□□□□ -1.65
EPHA3-201ENST00000336596 LINC00846Q9NV44 126 aa4.74□□□□□ -1.65
EPHA3-201ENST00000336596 IGFL1Q6UW32 110 aa4.74□□□□□ -1.65
EPHA3-201ENST00000336596 C9orf129Q5T035 196 aaKnown RBP4.73□□□□□ -1.65
EPHA3-201ENST00000336596 APCP25054 2843 aa4.73□□□□□ -1.65
EPHA3-201ENST00000336596 LOC400499M0QZD8 3231 aa4.73□□□□□ -1.65
EPHA3-201ENST00000336596 FP248Q71RG6 208 aaPredicted RBP4.73□□□□□ -1.65
EPHA3-201ENST00000336596 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
EPHA3-201ENST00000336596 HIVEP1P15822 2718 aa4.73□□□□□ -1.65
EPHA3-201ENST00000336596 TACC2O95359 2948 aa4.72□□□□□ -1.65
EPHA3-201ENST00000336596 Q5VSD8 79 aa4.72□□□□□ -1.65
EPHA3-201ENST00000336596 MYO15AQ9UKN7 3530 aa4.72□□□□□ -1.65
EPHA3-201ENST00000336596 A8MUN3 132 aa4.72□□□□□ -1.65
EPHA3-201ENST00000336596 SOSTDC1Q6X4U4 206 aa4.71□□□□□ -1.66
EPHA3-201ENST00000336596 A0A1W2PNN7 141 aa4.69□□□□□ -1.66
EPHA3-201ENST00000336596 C1orf195Q5TG92 126 aa4.69□□□□□ -1.66
EPHA3-201ENST00000336596 A0A087WVE0 104 aa4.68□□□□□ -1.66
EPHA3-201ENST00000336596 FAM104AQ969W3 186 aa4.67□□□□□ -1.66
EPHA3-201ENST00000336596 NSD1Q96L73 2696 aaPredicted RBP4.66□□□□□ -1.66
EPHA3-201ENST00000336596 MUC3AQ02505 3323 aa4.65□□□□□ -1.67
EPHA3-201ENST00000336596 LITAFQ99732 161 aa4.65□□□□□ -1.67
EPHA3-201ENST00000336596 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
EPHA3-201ENST00000336596 FAM218AQ96MZ4 157 aa4.64□□□□□ -1.67
EPHA3-201ENST00000336596 UQCR11O14957 56 aa4.64□□□□□ -1.67
EPHA3-201ENST00000336596 Q8N377 158 aa4.64□□□□□ -1.67
EPHA3-201ENST00000336596 PRR26Q8N8Z3 221 aa4.64□□□□□ -1.67
EPHA3-201ENST00000336596 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
EPHA3-201ENST00000336596 K7EQZ3 153 aa4.63□□□□□ -1.67
EPHA3-201ENST00000336596 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
EPHA3-201ENST00000336596 NBEAL1Q6ZS30 2694 aa4.62□□□□□ -1.67
EPHA3-201ENST00000336596 KMT2BQ9UMN6 2715 aaPredicted RBP4.62□□□□□ -1.67
EPHA3-201ENST00000336596 ZANQ9Y493 2812 aa4.62□□□□□ -1.67
EPHA3-201ENST00000336596 HRNRQ86YZ3 2850 aaPredicted RBP4.62□□□□□ -1.67
EPHA3-201ENST00000336596 CSAG1Q6PB30 78 aa4.62□□□□□ -1.67
EPHA3-201ENST00000336596 CCDC179H3BU77 68 aa4.61□□□□□ -1.67
EPHA3-201ENST00000336596 CFAP47Q6ZTR5 3102 aa4.61□□□□□ -1.67
EPHA3-201ENST00000336596 LINC01600Q96MT4 127 aa4.61□□□□□ -1.67
EPHA3-201ENST00000336596 NBEAL2Q6ZNJ1 2754 aa4.6□□□□□ -1.67
EPHA3-201ENST00000336596 CRYBG3Q68DQ2 2970 aa4.6□□□□□ -1.67
EPHA3-201ENST00000336596 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
EPHA3-201ENST00000336596 CELSR2Q9HCU4 2923 aa4.6□□□□□ -1.67
EPHA3-201ENST00000336596 IGLV5-48A0A075B6I7 105 aa4.59□□□□□ -1.67
EPHA3-201ENST00000336596 EIF4EBP3O60516 100 aaPredicted RBP4.59□□□□□ -1.68
EPHA3-201ENST00000336596 COA5Q86WW8 74 aa4.59□□□□□ -1.68
EPHA3-201ENST00000336596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.59□□□□□ -1.68
EPHA3-201ENST00000336596 PSPHP1O15172 72 aa4.58□□□□□ -1.68
EPHA3-201ENST00000336596 ZCCHC13Q8WW36 166 aaKnown RBP4.58□□□□□ -1.68
EPHA3-201ENST00000336596 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
EPHA3-201ENST00000336596 S4R3F8 94 aa4.58□□□□□ -1.68
EPHA3-201ENST00000336596 RPS29P62273 56 aaKnown RBP4.57□□□□□ -1.68
EPHA3-201ENST00000336596 DCHS1Q96JQ0 3298 aa4.56□□□□□ -1.68
EPHA3-201ENST00000336596 SPRR1BP22528 89 aa4.56□□□□□ -1.68
EPHA3-201ENST00000336596 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
EPHA3-201ENST00000336596 TENM4Q6N022 2769 aa4.55□□□□□ -1.68
EPHA3-201ENST00000336596 ANAPC11Q9NYG5 84 aa4.55□□□□□ -1.68
EPHA3-201ENST00000336596 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
EPHA3-201ENST00000336596 DMDP11532 3685 aa4.54□□□□□ -1.68
EPHA3-201ENST00000336596 Q6ZR54 194 aa4.54□□□□□ -1.68
EPHA3-201ENST00000336596 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
EPHA3-201ENST00000336596 SMCPP49901 116 aaPredicted RBP4.52□□□□□ -1.69
EPHA3-201ENST00000336596 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
EPHA3-201ENST00000336596 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
EPHA3-201ENST00000336596 RELNP78509 3460 aa4.52□□□□□ -1.69
EPHA3-201ENST00000336596 NIPBLQ6KC79 2804 aaeCLIP4.52□□□□□ -1.69
EPHA3-201ENST00000336596 LAMA5O15230 3695 aa4.51□□□□□ -1.69
EPHA3-201ENST00000336596 IGLV8-61A0A075B6I0 122 aa4.51□□□□□ -1.69
EPHA3-201ENST00000336596 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
EPHA3-201ENST00000336596 DCHS2Q6V1P9 2916 aa4.51□□□□□ -1.69
EPHA3-201ENST00000336596 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
EPHA3-201ENST00000336596 PRO0461Q9UI25 63 aa4.5□□□□□ -1.69
EPHA3-201ENST00000336596 SPRR1AP35321 89 aa4.5□□□□□ -1.69
EPHA3-201ENST00000336596 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
EPHA3-201ENST00000336596 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
EPHA3-201ENST00000336596 Q8N1X5 172 aa4.48□□□□□ -1.69
EPHA3-201ENST00000336596 ASH1LQ9NR48 2969 aaKnown RBP4.48□□□□□ -1.69
EPHA3-201ENST00000336596 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
EPHA3-201ENST00000336596 NF1P21359 2839 aa4.47□□□□□ -1.69
EPHA3-201ENST00000336596 FBN2P35556 2912 aa4.47□□□□□ -1.69
EPHA3-201ENST00000336596 ASPMQ8IZT6 3477 aa4.47□□□□□ -1.69
EPHA3-201ENST00000336596 DMAC1Q96GE9 116 aa4.46□□□□□ -1.69
EPHA3-201ENST00000336596 KRTAP26-1Q6PEX3 210 aa4.46□□□□□ -1.7
EPHA3-201ENST00000336596 WDFY3Q8IZQ1 3526 aa4.46□□□□□ -1.7
EPHA3-201ENST00000336596 KLKP1Q107X0 134 aa4.45□□□□□ -1.7
EPHA3-201ENST00000336596 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
EPHA3-201ENST00000336596 A0A0G2JQZ4 141 aa4.43□□□□□ -1.7
EPHA3-201ENST00000336596 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
EPHA3-201ENST00000336596 R4GN34 69 aa4.43□□□□□ -1.7
EPHA3-201ENST00000336596 PDZD2O15018 2839 aa4.41□□□□□ -1.7
EPHA3-201ENST00000336596 SPINK7P58062 85 aa4.41□□□□□ -1.7
EPHA3-201ENST00000336596 STAB2Q8WWQ8 2551 aa4.41□□□□□ -1.7
EPHA3-201ENST00000336596 MXRA5Q9NR99 2828 aa4.41□□□□□ -1.7
EPHA3-201ENST00000336596 A0A1B0GU33 70 aa4.41□□□□□ -1.7
EPHA3-201ENST00000336596 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
EPHA3-201ENST00000336596 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
EPHA3-201ENST00000336596 Q8NDZ9 215 aa4.4□□□□□ -1.71
EPHA3-201ENST00000336596 A0A0D9SG42 100 aa4.39□□□□□ -1.71
EPHA3-201ENST00000336596 H7BZZ5 65 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms