RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 FAM168BA1KXE4 195 aa5.48□□□□□ -1.53
PDLIM5-201ENST00000317968 CXCL6P80162 114 aa5.48□□□□□ -1.53
PDLIM5-201ENST00000317968 C7orf65Q6ZTY9 151 aa5.47□□□□□ -1.53
PDLIM5-201ENST00000317968 H0Y9P7 68 aa5.47□□□□□ -1.53
PDLIM5-201ENST00000317968 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
PDLIM5-201ENST00000317968 STAB2Q8WWQ8 2551 aa5.47□□□□□ -1.53
PDLIM5-201ENST00000317968 NBEAL1Q6ZS30 2694 aa5.46□□□□□ -1.53
PDLIM5-201ENST00000317968 LINC00208Q96KT6 92 aa5.46□□□□□ -1.53
PDLIM5-201ENST00000317968 FAM229BQ4G0N7 80 aa5.46□□□□□ -1.54
PDLIM5-201ENST00000317968 ASPMQ8IZT6 3477 aa5.46□□□□□ -1.54
PDLIM5-201ENST00000317968 TRBV7-4A0A0J9YYF1 115 aa5.46□□□□□ -1.54
PDLIM5-201ENST00000317968 OXTP01178 125 aa5.46□□□□□ -1.54
PDLIM5-201ENST00000317968 SPRR1AP35321 89 aa5.45□□□□□ -1.54
PDLIM5-201ENST00000317968 Q5VSD8 79 aa5.45□□□□□ -1.54
PDLIM5-201ENST00000317968 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
PDLIM5-201ENST00000317968 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
PDLIM5-201ENST00000317968 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
PDLIM5-201ENST00000317968 CD164Q04900 197 aa5.43□□□□□ -1.54
PDLIM5-201ENST00000317968 SPRR4Q96PI1 79 aa5.43□□□□□ -1.54
PDLIM5-201ENST00000317968 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
PDLIM5-201ENST00000317968 TRAV7A0A075B6U4 112 aa5.42□□□□□ -1.54
PDLIM5-201ENST00000317968 H3BPC8 53 aa5.41□□□□□ -1.54
PDLIM5-201ENST00000317968 TRBV7-7A0A0K0K1E9 115 aa5.41□□□□□ -1.54
PDLIM5-201ENST00000317968 Q6ZQT0 140 aa5.41□□□□□ -1.54
PDLIM5-201ENST00000317968 Q6ZSA8 131 aa5.41□□□□□ -1.54
PDLIM5-201ENST00000317968 A0A1W2PNN7 141 aa5.41□□□□□ -1.54
PDLIM5-201ENST00000317968 TENM1Q9UKZ4 2725 aa5.4□□□□□ -1.54
PDLIM5-201ENST00000317968 IGLV5-48A0A075B6I7 105 aa5.4□□□□□ -1.54
PDLIM5-201ENST00000317968 Q6ZRN7 208 aaPredicted RBP5.4□□□□□ -1.54
PDLIM5-201ENST00000317968 OBSCN-AS1Q96MR7 158 aa5.4□□□□□ -1.54
PDLIM5-201ENST00000317968 A8MWP4 228 aa5.39□□□□□ -1.55
PDLIM5-201ENST00000317968 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-201ENST00000317968 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
PDLIM5-201ENST00000317968 MT-ATP8P03928 68 aa5.39□□□□□ -1.55
PDLIM5-201ENST00000317968 ACYP2P14621 99 aa5.39□□□□□ -1.55
PDLIM5-201ENST00000317968 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
PDLIM5-201ENST00000317968 C9orf92A6NGG3 77 aa5.39□□□□□ -1.55
PDLIM5-201ENST00000317968 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
PDLIM5-201ENST00000317968 PCOTHQ58A44 107 aa5.38□□□□□ -1.55
PDLIM5-201ENST00000317968 LOC101927531A0A1B0GV80 90 aa5.38□□□□□ -1.55
PDLIM5-201ENST00000317968 MRPL34Q9BQ48 92 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-201ENST00000317968 LINC00846Q9NV44 126 aa5.37□□□□□ -1.55
PDLIM5-201ENST00000317968 SPRR1BP22528 89 aa5.37□□□□□ -1.55
PDLIM5-201ENST00000317968 Q8N377 158 aa5.37□□□□□ -1.55
PDLIM5-201ENST00000317968 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
PDLIM5-201ENST00000317968 TMEM254Q8TBM7 123 aa5.35□□□□□ -1.55
PDLIM5-201ENST00000317968 M0R2T5 61 aa5.35□□□□□ -1.55
PDLIM5-201ENST00000317968 Q8NDZ9 215 aa5.34□□□□□ -1.55
PDLIM5-201ENST00000317968 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
PDLIM5-201ENST00000317968 SMG1Q96Q15 3661 aaKnown RBP5.34□□□□□ -1.56
PDLIM5-201ENST00000317968 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.56
PDLIM5-201ENST00000317968 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
PDLIM5-201ENST00000317968 CCDC179H3BU77 68 aa5.33□□□□□ -1.56
PDLIM5-201ENST00000317968 IGFL1Q6UW32 110 aa5.33□□□□□ -1.56
PDLIM5-201ENST00000317968 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
PDLIM5-201ENST00000317968 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-201ENST00000317968 DSCR10P59022 87 aa5.33□□□□□ -1.56
PDLIM5-201ENST00000317968 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
PDLIM5-201ENST00000317968 KRTAP4-16G5E9R7 235 aaPredicted RBP5.31□□□□□ -1.56
PDLIM5-201ENST00000317968 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-201ENST00000317968 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
PDLIM5-201ENST00000317968 C8orf17Q9NRJ1 99 aa5.31□□□□□ -1.56
PDLIM5-201ENST00000317968 COX7CP15954 63 aa5.3□□□□□ -1.56
PDLIM5-201ENST00000317968 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
PDLIM5-201ENST00000317968 SPENQ96T58 3664 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-201ENST00000317968 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-201ENST00000317968 ERC2-IT1O76042 136 aa5.28□□□□□ -1.56
PDLIM5-201ENST00000317968 VWFP04275 2813 aa5.28□□□□□ -1.56
PDLIM5-201ENST00000317968 TENM3Q9P273 2699 aa5.28□□□□□ -1.56
PDLIM5-201ENST00000317968 KRTAP10-1P60331 282 aa5.28□□□□□ -1.56
PDLIM5-201ENST00000317968 A6NED7 52 aa5.28□□□□□ -1.56
PDLIM5-201ENST00000317968 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
PDLIM5-201ENST00000317968 PRR15Q8IV56 129 aa5.26□□□□□ -1.57
PDLIM5-201ENST00000317968 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
PDLIM5-201ENST00000317968 A0A1W2PNM2 257 aa5.24□□□□□ -1.57
PDLIM5-201ENST00000317968 LINC00483Q53H64 154 aa5.24□□□□□ -1.57
PDLIM5-201ENST00000317968 A0A1B0GU69 56 aa5.23□□□□□ -1.57
PDLIM5-201ENST00000317968 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
PDLIM5-201ENST00000317968 CELSR1Q9NYQ6 3014 aa5.23□□□□□ -1.57
PDLIM5-201ENST00000317968 FBN1P35555 2871 aaKnown RBP5.22□□□□□ -1.57
PDLIM5-201ENST00000317968 A0A087WVE0 104 aa5.21□□□□□ -1.58
PDLIM5-201ENST00000317968 Q8N1X5 172 aa5.2□□□□□ -1.58
PDLIM5-201ENST00000317968 KRTAP7-1Q8IUC3 87 aa5.2□□□□□ -1.58
PDLIM5-201ENST00000317968 NBPF19A0A087WUL8 3843 aa5.19□□□□□ -1.58
PDLIM5-201ENST00000317968 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
PDLIM5-201ENST00000317968 K7EQZ3 153 aa5.18□□□□□ -1.58
PDLIM5-201ENST00000317968 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
PDLIM5-201ENST00000317968 PANO1I0J062 215 aa5.17□□□□□ -1.58
PDLIM5-201ENST00000317968 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
PDLIM5-201ENST00000317968 HRES1P13985 223 aa5.16□□□□□ -1.58
PDLIM5-201ENST00000317968 C4orf26Q17RF5 130 aa5.15□□□□□ -1.59
PDLIM5-201ENST00000317968 A8MUN3 132 aa5.13□□□□□ -1.59
PDLIM5-201ENST00000317968 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
PDLIM5-201ENST00000317968 ASB16-AS1Q495Z4 193 aa5.11□□□□□ -1.59
PDLIM5-201ENST00000317968 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-201ENST00000317968 CSAG1Q6PB30 78 aa5.1□□□□□ -1.59
PDLIM5-201ENST00000317968 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
PDLIM5-201ENST00000317968 Q5XG85 94 aa5.1□□□□□ -1.59
PDLIM5-201ENST00000317968 CSMD1Q96PZ7 3565 aa5.1□□□□□ -1.59
PDLIM5-201ENST00000317968 LINC00472Q9H8W2 130 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms