RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 WWC2-AS2Q96NR7 200 aa5.63□□□□□ -1.51
COL6A5-202ENST00000312481 TACC2O95359 2948 aa5.62□□□□□ -1.51
COL6A5-202ENST00000312481 Q6ZR54 194 aa5.61□□□□□ -1.51
COL6A5-202ENST00000312481 DMAC1Q96GE9 116 aa5.61□□□□□ -1.51
COL6A5-202ENST00000312481 A0A087WTM6 91 aa5.61□□□□□ -1.51
COL6A5-202ENST00000312481 Q8N9P0 234 aaPredicted RBP5.6□□□□□ -1.51
COL6A5-202ENST00000312481 LCE6AA0A183 80 aa5.6□□□□□ -1.51
COL6A5-202ENST00000312481 Q5XG85 94 aa5.6□□□□□ -1.51
COL6A5-202ENST00000312481 HTTP42858 3142 aa5.59□□□□□ -1.51
COL6A5-202ENST00000312481 LINC00472Q9H8W2 130 aa5.59□□□□□ -1.51
COL6A5-202ENST00000312481 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
COL6A5-202ENST00000312481 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
COL6A5-202ENST00000312481 Q96NJ1 140 aa5.58□□□□□ -1.52
COL6A5-202ENST00000312481 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
COL6A5-202ENST00000312481 FAM168BA1KXE4 195 aa5.57□□□□□ -1.52
COL6A5-202ENST00000312481 NF1P21359 2839 aa5.56□□□□□ -1.52
COL6A5-202ENST00000312481 PLAC8Q9NZF1 115 aa5.56□□□□□ -1.52
COL6A5-202ENST00000312481 COX6B2Q6YFQ2 88 aa5.55□□□□□ -1.52
COL6A5-202ENST00000312481 KRTAP1-3Q8IUG1 177 aa5.55□□□□□ -1.52
COL6A5-202ENST00000312481 SMR3AQ99954 134 aa5.55□□□□□ -1.52
COL6A5-202ENST00000312481 LRBAP50851 2863 aa5.55□□□□□ -1.52
COL6A5-202ENST00000312481 ZZEF1O43149 2961 aa5.55□□□□□ -1.52
COL6A5-202ENST00000312481 NBEAQ8NFP9 2946 aa5.55□□□□□ -1.52
COL6A5-202ENST00000312481 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
COL6A5-202ENST00000312481 APLNQ9ULZ1 77 aa5.54□□□□□ -1.52
COL6A5-202ENST00000312481 FP248Q71RG6 208 aaPredicted RBP5.53□□□□□ -1.52
COL6A5-202ENST00000312481 KRTAP24-1Q3LI83 254 aa5.53□□□□□ -1.52
COL6A5-202ENST00000312481 KALRNO60229 2985 aa5.53□□□□□ -1.52
COL6A5-202ENST00000312481 K7EIL1 84 aa5.52□□□□□ -1.53
COL6A5-202ENST00000312481 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
COL6A5-202ENST00000312481 HIVEP1P15822 2718 aa5.52□□□□□ -1.53
COL6A5-202ENST00000312481 ZANQ9Y493 2812 aa5.52□□□□□ -1.53
COL6A5-202ENST00000312481 MMP24-AS1A0A0U1RRL7 71 aa5.52□□□□□ -1.53
COL6A5-202ENST00000312481 UTRNP46939 3433 aa5.52□□□□□ -1.53
COL6A5-202ENST00000312481 RANBP2P49792 3224 aaKnown RBP5.51□□□□□ -1.53
COL6A5-202ENST00000312481 TNRC18O15417 2968 aaPredicted RBP5.51□□□□□ -1.53
COL6A5-202ENST00000312481 KRTAP1-1Q07627 177 aa5.5□□□□□ -1.53
COL6A5-202ENST00000312481 KRTAP4-16G5E9R7 235 aaPredicted RBP5.5□□□□□ -1.53
COL6A5-202ENST00000312481 J3QL48 77 aa5.49□□□□□ -1.53
COL6A5-202ENST00000312481 Q5VV11 94 aa5.49□□□□□ -1.53
COL6A5-202ENST00000312481 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
COL6A5-202ENST00000312481 A0A1B0GU33 70 aa5.49□□□□□ -1.53
COL6A5-202ENST00000312481 CHTF8P0CG12 524 aa5.48□□□□□ -1.53
COL6A5-202ENST00000312481 HRNRQ86YZ3 2850 aaPredicted RBP5.47□□□□□ -1.53
COL6A5-202ENST00000312481 MXRA5Q9NR99 2828 aa5.46□□□□□ -1.53
COL6A5-202ENST00000312481 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
COL6A5-202ENST00000312481 A0A1W2PNN7 141 aa5.45□□□□□ -1.54
COL6A5-202ENST00000312481 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
COL6A5-202ENST00000312481 HRES1P13985 223 aa5.44□□□□□ -1.54
COL6A5-202ENST00000312481 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
COL6A5-202ENST00000312481 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
COL6A5-202ENST00000312481 KRTAP26-1Q6PEX3 210 aa5.43□□□□□ -1.54
COL6A5-202ENST00000312481 PRUNE2Q8WUY3 3088 aa5.4□□□□□ -1.54
COL6A5-202ENST00000312481 WDFY4Q6ZS81 3184 aa5.4□□□□□ -1.55
COL6A5-202ENST00000312481 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
COL6A5-202ENST00000312481 TENM1Q9UKZ4 2725 aa5.38□□□□□ -1.55
COL6A5-202ENST00000312481 KRTAP10-3P60369 221 aa5.38□□□□□ -1.55
COL6A5-202ENST00000312481 Q5W150 140 aa5.37□□□□□ -1.55
COL6A5-202ENST00000312481 LAMA1P25391 3075 aa5.36□□□□□ -1.55
COL6A5-202ENST00000312481 ANAPC11Q9NYG5 84 aa5.36□□□□□ -1.55
COL6A5-202ENST00000312481 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
COL6A5-202ENST00000312481 PRR26Q8N8Z3 221 aa5.33□□□□□ -1.56
COL6A5-202ENST00000312481 USP34Q70CQ2 3546 aa5.32□□□□□ -1.56
COL6A5-202ENST00000312481 ADGRG4Q8IZF6 3080 aa5.32□□□□□ -1.56
COL6A5-202ENST00000312481 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
COL6A5-202ENST00000312481 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
COL6A5-202ENST00000312481 MKI67P46013 3256 aaKnown RBP5.31□□□□□ -1.56
COL6A5-202ENST00000312481 DCHS2Q6V1P9 2916 aa5.31□□□□□ -1.56
COL6A5-202ENST00000312481 ROMO1P60602 79 aa5.31□□□□□ -1.56
COL6A5-202ENST00000312481 TENM3Q9P273 2699 aa5.31□□□□□ -1.56
COL6A5-202ENST00000312481 ASH1LQ9NR48 2969 aaKnown RBP5.3□□□□□ -1.56
COL6A5-202ENST00000312481 A0A0D9SG42 100 aa5.3□□□□□ -1.56
COL6A5-202ENST00000312481 FBN2P35556 2912 aa5.3□□□□□ -1.56
COL6A5-202ENST00000312481 CYSTM1Q9H1C7 97 aa5.29□□□□□ -1.56
COL6A5-202ENST00000312481 Q8NDZ9 215 aa5.29□□□□□ -1.56
COL6A5-202ENST00000312481 NOTCH2NLQ7Z3S9 236 aa5.28□□□□□ -1.56
COL6A5-202ENST00000312481 M0QZ58 72 aa5.28□□□□□ -1.56
COL6A5-202ENST00000312481 PDZD2O15018 2839 aa5.27□□□□□ -1.57
COL6A5-202ENST00000312481 OXTP01178 125 aa5.27□□□□□ -1.57
COL6A5-202ENST00000312481 S4R3F8 94 aa5.27□□□□□ -1.57
COL6A5-202ENST00000312481 VWFP04275 2813 aa5.26□□□□□ -1.57
COL6A5-202ENST00000312481 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
COL6A5-202ENST00000312481 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
COL6A5-202ENST00000312481 A6NN06 94 aa5.24□□□□□ -1.57
COL6A5-202ENST00000312481 LAMA3Q16787 3333 aa5.24□□□□□ -1.57
COL6A5-202ENST00000312481 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.24□□□□□ -1.57
COL6A5-202ENST00000312481 Q6ZSA8 131 aa5.23□□□□□ -1.57
COL6A5-202ENST00000312481 DMXL2Q8TDJ6 3036 aa5.23□□□□□ -1.57
COL6A5-202ENST00000312481 TGP01266 2768 aa5.23□□□□□ -1.57
COL6A5-202ENST00000312481 CASC10Q5T4H9 136 aa5.22□□□□□ -1.57
COL6A5-202ENST00000312481 COL12A1Q99715 3063 aa5.22□□□□□ -1.57
COL6A5-202ENST00000312481 KRTAP13-1Q8IUC0 172 aa5.21□□□□□ -1.57
COL6A5-202ENST00000312481 Q8N1X5 172 aa5.21□□□□□ -1.58
COL6A5-202ENST00000312481 PANO1I0J062 215 aa5.2□□□□□ -1.58
COL6A5-202ENST00000312481 SPINK7P58062 85 aa5.19□□□□□ -1.58
COL6A5-202ENST00000312481 CRYBG3Q68DQ2 2970 aa5.19□□□□□ -1.58
COL6A5-202ENST00000312481 SMR3BP02814 79 aaPredicted RBP5.19□□□□□ -1.58
COL6A5-202ENST00000312481 BOD1L1Q8NFC6 3051 aa5.19□□□□□ -1.58
COL6A5-202ENST00000312481 H3BS24 57 aa5.17□□□□□ -1.58
COL6A5-202ENST00000312481 ATMQ13315 3056 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms