RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 A0A096LNJ9 63 aa4.82□□□□□ -1.64
TSC1-201ENST00000298552 SMR3AQ99954 134 aa4.82□□□□□ -1.64
TSC1-201ENST00000298552 URB1-AS1Q96HZ7 61 aa4.82□□□□□ -1.64
TSC1-201ENST00000298552 GOLGB1Q14789 3259 aaKnown RBP4.82□□□□□ -1.64
TSC1-201ENST00000298552 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
TSC1-201ENST00000298552 TRANK1O15050 2925 aa4.81□□□□□ -1.64
TSC1-201ENST00000298552 ITPR3Q14573 2671 aa4.81□□□□□ -1.64
TSC1-201ENST00000298552 M0QZ58 72 aa4.8□□□□□ -1.64
TSC1-201ENST00000298552 LINC00310P59036 64 aa4.8□□□□□ -1.64
TSC1-201ENST00000298552 SMCPP49901 116 aaPredicted RBP4.8□□□□□ -1.64
TSC1-201ENST00000298552 LINC00612Q8N6U2 182 aa4.76□□□□□ -1.65
TSC1-201ENST00000298552 SMR3BP02814 79 aaPredicted RBP4.74□□□□□ -1.65
TSC1-201ENST00000298552 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
TSC1-201ENST00000298552 DNAH12Q6ZR08 3092 aa4.73□□□□□ -1.65
TSC1-201ENST00000298552 SETXQ7Z333 2677 aaKnown RBP4.71□□□□□ -1.65
TSC1-201ENST00000298552 COL4A2P08572 1712 aa4.71□□□□□ -1.66
TSC1-201ENST00000298552 UTP20O75691 2785 aaKnown RBP4.71□□□□□ -1.66
TSC1-201ENST00000298552 KRTAP24-1Q3LI83 254 aa4.69□□□□□ -1.66
TSC1-201ENST00000298552 A0A087X002 238 aa4.69□□□□□ -1.66
TSC1-201ENST00000298552 ZNF292O60281 2723 aa4.69□□□□□ -1.66
TSC1-201ENST00000298552 A0A1W2PPR1 153 aa4.69□□□□□ -1.66
TSC1-201ENST00000298552 TENM3Q9P273 2699 aa4.68□□□□□ -1.66
TSC1-201ENST00000298552 TNP1P09430 55 aa4.66□□□□□ -1.66
TSC1-201ENST00000298552 MMP24-AS1A0A0U1RRL7 71 aa4.66□□□□□ -1.66
TSC1-201ENST00000298552 Q5VSD8 79 aa4.66□□□□□ -1.66
TSC1-201ENST00000298552 K7EIL1 84 aa4.65□□□□□ -1.66
TSC1-201ENST00000298552 PANO1I0J062 215 aa4.65□□□□□ -1.66
TSC1-201ENST00000298552 MAP1AP78559 2803 aaPredicted RBP4.65□□□□□ -1.67
TSC1-201ENST00000298552 Q5W150 140 aa4.63□□□□□ -1.67
TSC1-201ENST00000298552 Q8NDZ9 215 aa4.63□□□□□ -1.67
TSC1-201ENST00000298552 ADM2Q7Z4H4 148 aa4.63□□□□□ -1.67
TSC1-201ENST00000298552 PCNTO95613 3336 aa4.63□□□□□ -1.67
TSC1-201ENST00000298552 UBR5O95071 2799 aaPredicted RBP4.63□□□□□ -1.67
TSC1-201ENST00000298552 Q5VV11 94 aa4.62□□□□□ -1.67
TSC1-201ENST00000298552 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
TSC1-201ENST00000298552 KLK9Q2XQG4 91 aa4.62□□□□□ -1.67
TSC1-201ENST00000298552 TEX15Q9BXT5 2789 aa4.61□□□□□ -1.67
TSC1-201ENST00000298552 ANAPC11Q9NYG5 84 aa4.61□□□□□ -1.67
TSC1-201ENST00000298552 PLAC8Q9NZF1 115 aa4.61□□□□□ -1.67
TSC1-201ENST00000298552 SPRR1BP22528 89 aa4.6□□□□□ -1.67
TSC1-201ENST00000298552 FLNAP21333 2647 aaKnown RBP4.59□□□□□ -1.67
TSC1-201ENST00000298552 A0A0C4DFX4 3053 aa4.59□□□□□ -1.68
TSC1-201ENST00000298552 APCP25054 2843 aa4.58□□□□□ -1.68
TSC1-201ENST00000298552 GIG44P09565 113 aaPredicted RBP4.57□□□□□ -1.68
TSC1-201ENST00000298552 LAMA2P24043 3122 aaKnown RBP4.57□□□□□ -1.68
TSC1-201ENST00000298552 UTRNP46939 3433 aa4.57□□□□□ -1.68
TSC1-201ENST00000298552 RPS29P62273 56 aaKnown RBP4.56□□□□□ -1.68
TSC1-201ENST00000298552 CHD9Q3L8U1 2897 aa4.56□□□□□ -1.68
TSC1-201ENST00000298552 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
TSC1-201ENST00000298552 CASC10Q5T4H9 136 aa4.55□□□□□ -1.68
TSC1-201ENST00000298552 CEP350Q5VT06 3117 aa4.54□□□□□ -1.68
TSC1-201ENST00000298552 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
TSC1-201ENST00000298552 C5orf42Q9H799 3197 aa4.53□□□□□ -1.68
TSC1-201ENST00000298552 TRIOO75962 3097 aa4.53□□□□□ -1.68
TSC1-201ENST00000298552 A8MUU9 505 aa4.53□□□□□ -1.68
TSC1-201ENST00000298552 KRTAP10-11P60412 298 aa4.52□□□□□ -1.69
TSC1-201ENST00000298552 DSPP15924 2871 aaKnown RBP4.51□□□□□ -1.69
TSC1-201ENST00000298552 LINC00472Q9H8W2 130 aa4.5□□□□□ -1.69
TSC1-201ENST00000298552 NOTCH2NLQ7Z3S9 236 aa4.5□□□□□ -1.69
TSC1-201ENST00000298552 Q5XG85 94 aa4.49□□□□□ -1.69
TSC1-201ENST00000298552 A0A0G2JQZ4 141 aa4.47□□□□□ -1.69
TSC1-201ENST00000298552 FRYLO94915 3013 aa4.47□□□□□ -1.69
TSC1-201ENST00000298552 HIVEP1P15822 2718 aa4.46□□□□□ -1.7
TSC1-201ENST00000298552 VPS13AQ96RL7 3174 aa4.45□□□□□ -1.7
TSC1-201ENST00000298552 SPRR1AP35321 89 aa4.45□□□□□ -1.7
TSC1-201ENST00000298552 FLNCQ14315 2725 aa4.41□□□□□ -1.7
TSC1-201ENST00000298552 LCE6AA0A183 80 aa4.38□□□□□ -1.71
TSC1-201ENST00000298552 CFAP54Q96N23 3096 aa4.38□□□□□ -1.71
TSC1-201ENST00000298552 SRRM2Q9UQ35 2752 aaKnown RBP4.37□□□□□ -1.71
TSC1-201ENST00000298552 A0A096LNT2 108 aa4.36□□□□□ -1.71
TSC1-201ENST00000298552 A6NN06 94 aa4.35□□□□□ -1.71
TSC1-201ENST00000298552 KRTAP26-1Q6PEX3 210 aa4.35□□□□□ -1.71
TSC1-201ENST00000298552 CHD7Q9P2D1 2997 aa4.34□□□□□ -1.71
TSC1-201ENST00000298552 TACC2O95359 2948 aa4.34□□□□□ -1.72
TSC1-201ENST00000298552 A8MU10 97 aa4.33□□□□□ -1.72
TSC1-201ENST00000298552 KRTAP10-3P60369 221 aa4.3□□□□□ -1.72
TSC1-201ENST00000298552 CYSTM1Q9H1C7 97 aa4.3□□□□□ -1.72
TSC1-201ENST00000298552 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
TSC1-201ENST00000298552 MKI67P46013 3256 aaKnown RBP4.28□□□□□ -1.72
TSC1-201ENST00000298552 NBEAL2Q6ZNJ1 2754 aa4.28□□□□□ -1.72
TSC1-201ENST00000298552 LRBAP50851 2863 aa4.28□□□□□ -1.72
TSC1-201ENST00000298552 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
TSC1-201ENST00000298552 MGAQ8IWI9 3026 aa4.27□□□□□ -1.73
TSC1-201ENST00000298552 NF1P21359 2839 aa4.27□□□□□ -1.73
TSC1-201ENST00000298552 KRTAP1-3Q8IUG1 177 aa4.27□□□□□ -1.73
TSC1-201ENST00000298552 INE1O15225 51 aa4.25□□□□□ -1.73
TSC1-201ENST00000298552 ITPR1Q14643 2758 aa4.25□□□□□ -1.73
TSC1-201ENST00000298552 KALRNO60229 2985 aa4.24□□□□□ -1.73
TSC1-201ENST00000298552 USP34Q70CQ2 3546 aa4.23□□□□□ -1.73
TSC1-201ENST00000298552 PRUNE2Q8WUY3 3088 aa4.23□□□□□ -1.73
TSC1-201ENST00000298552 KRTAP1-1Q07627 177 aa4.23□□□□□ -1.73
TSC1-201ENST00000298552 RANBP2P49792 3224 aaKnown RBP4.22□□□□□ -1.73
TSC1-201ENST00000298552 NBEAQ8NFP9 2946 aa4.22□□□□□ -1.73
TSC1-201ENST00000298552 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
TSC1-201ENST00000298552 LAMA1P25391 3075 aa4.22□□□□□ -1.73
TSC1-201ENST00000298552 XIRP2A4UGR9 3374 aa4.21□□□□□ -1.74
TSC1-201ENST00000298552 LAMA3Q16787 3333 aa4.21□□□□□ -1.74
TSC1-201ENST00000298552 TENM1Q9UKZ4 2725 aa4.21□□□□□ -1.74
TSC1-201ENST00000298552 FRYQ5TBA9 3013 aa4.21□□□□□ -1.74
TSC1-201ENST00000298552 TNRC18O15417 2968 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms